KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:37 2014 Check: 00 .. Name: ENSP00000295025/1-619 Len: 625 Check: 3587 Weight: 1.00 Name: ENSBTAP00000020447/1-589 Len: 625 Check: 6251 Weight: 1.00 Name: ENSTTRP00000012662/1-585 Len: 625 Check: 6453 Weight: 1.00 Name: BACU013703/1-492 Len: 625 Check: 6561 Weight: 1.00 Name: bmy_03006T0/1-444 Len: 625 Check: 5094 Weight: 1.00 // 1 50 ENSP00000295025/1-619 MASGAYNPYI EIIEQPRQRG MRFRYKCEGR SAGSIPGEHS TDNNRTYPSI ENSBTAP00000020447/1-589 --PGGFNPCI EIIEQPRQRG MRFRYKCEGR SAGSIPGEHS TDNNRTYPSI ENSTTRP00000012662/1-585 ----GNEPRI EIIEQPRQRG MRFRYKCEGR SAGSIPGEHS TDNNRTYPSI BACU013703/1-492 ---------- ---------- MRFRYKCEGR SAGSIPGEHS TDNNRTYPSI bmy_03006T0/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000295025/1-619 QIMNYYGKGK VRITLVTKND PYKPHPHDLV GKDCRDGYYE AEFGQERRPL ENSBTAP00000020447/1-589 QILNYYGKGK VRITLVTKND PYKPHPHDLV GKDCRDGYYE AEFGQERRPL ENSTTRP00000012662/1-585 QIMNYYGKGK VRITLVTKNI PHKPHPHDLV -KDCRDGYYE AXXXXXXXXX BACU013703/1-492 QIMNYYGKGK VRITLVTKND PYKPHPHDLV GKDCRDGYYE AEFGQERRPL bmy_03006T0/1-444 ---------- ---------- ---------- -------MY- ---------- 101 150 ENSP00000295025/1-619 FFQNLGIRCV KKKEVKEAII TRIKAGINPF NVPEKQLNDI EDCDLNVVRL ENSBTAP00000020447/1-589 FFQNLGIRCV KKKEVKDAVI SRVRAGINPF NVPEQQLLDI EDCDLNVVRL ENSTTRP00000012662/1-585 XFQNLGIRCV KKKEVKEAII SRIRAGINPF NVSEQELLDI EDCDLNVVRL BACU013703/1-492 FFQNLGIRCV KKKEVKEAII SRIRAGINPF NVPEQQLLDI EDCDLNVVRL bmy_03006T0/1-444 ---------- ---------- ---------F SVPEQQLLDI EDCDLNVVRL 151 200 ENSP00000295025/1-619 CFQVFLPDEH GNLTTALPPV VSNPIYDNRA PNTAELRICR VNKNCGSVRG ENSBTAP00000020447/1-589 CFQVFLPDEH GNLTTALPPV VSNPIYDNRA PNTAELRICR VNKNCGSVKG ENSTTRP00000012662/1-585 CFQVFLPDER GNLTTALRPI VSNPIYDNRA PNTAELRICR VNKNCGSVRG BACU013703/1-492 CFQVFLPDEH GNLTTALPPI VSNPIYDNH- ---------- ---------- bmy_03006T0/1-444 CFQVFLPDEH GNLTTALPPI VSNPIYDNRA PNTAELRICR VNKNCGSVRG 201 250 ENSP00000295025/1-619 GDEIFLLCDK VQKDDIEVRF VLNDWEAKGI FSQADVHRQV AIVFKTPPYC ENSBTAP00000020447/1-589 GDEIFLLCDK VQKDDIEVRF VLNDWEAKGV FSQADVHRQV AIVFKTPPYC ENSTTRP00000012662/1-585 GDEIFLLCDK VQKDDIEVRF VLNDWEAKGI FSQADVHRQV AIVFKTPPYC BACU013703/1-492 ---------- ----DIEVRF VLNDWEAKGI FSQADVHRQV AIVFKTPPYC bmy_03006T0/1-444 GDEIFLLCDK VQKDDIEVRF VLNDWEAKGI FSQADVHRQV AIVFKTPPYC 251 300 ENSP00000295025/1-619 KAITEPVTVK MQLRRPSDQE VSESMDFRYL PDEKDTYGNK AKKQKTTLLF ENSBTAP00000020447/1-589 KAIIEPVTVK MQLRRPSDQE VSESMDFRYL PDEKDTYGNK AKKQKTTLLF ENSTTRP00000012662/1-585 KAITEPVTVK MQLRRPSDQE VSESMDFRYL PDEKDTYGNK AKKQKTTLLF BACU013703/1-492 KAITEPVTVK MQLRRPSDQE VSESMDFRYL PDE------- ---------- bmy_03006T0/1-444 KAITEPVTVK MQLRRPSDQE VSESMDFRYL PDEK------ ---------- 301 350 ENSP00000295025/1-619 QKLCQDHVET GFRHVDQDGL ELLTSGDPPT LASQSAGITV NFPERPRPGL ENSBTAP00000020447/1-589 HKLWQD---- ---------- ---------- -------CGV NFPERPRPSP ENSTTRP00000012662/1-585 QKLWQD---- ---------- ---------- -------C-V NFPERPRPSP BACU013703/1-492 ---------- ---------- ---------- ---------- ---------- bmy_03006T0/1-444 ---------- ---------- ---------- --------GV NFPERPRPSP 351 400 ENSP00000295025/1-619 LGSIGEGRYF KKEPNLFSHD AVVREMPTGV SSQAESYYPS PGPISSGLSH ENSBTAP00000020447/1-589 LGPTGEGRFI KKEPNLFSHG AVLPETSRPV SSQAESYYSS SASISSTLSH ENSTTRP00000012662/1-585 LGSTGEGRFI KKEPVLFSHG AVLTETSGPV SSQAESYYSS SAPISSALPH BACU013703/1-492 ---------- -KEPVLFSHG AVLTETSGPV SSQAESYYSS SVSISSALPH bmy_03006T0/1-444 LGSTGEGRFI KKEPVLFSHG AVLTETSGPV SSQAESYYSS SVSISSALTH 401 450 ENSP00000295025/1-619 HAS----MAP LPSSSWSSVA HPTPRSGNTN PLSSFSTRTL PSNSQGIPPF ENSBTAP00000020447/1-589 PASAMLPMGT QSSSGWSSVA HPTSRSVNTN SLSSFSTGTL SSNSQVIPPF ENSTTRP00000012662/1-585 HASAIPTMVP QPSSSWSSVA YATSRSVNTN SLSSFSTGTL SSNSQVIPPF BACU013703/1-492 HASAIPPMVP QPSSSWSSVA HATSRSVNTN SLSSFSTGTL SSNSQVIPPF bmy_03006T0/1-444 HASAIPPMVP QPSSSWSSVA HATSRSVNPN SLSSFSTGTL SSNSQVMPPF 451 500 ENSP00000295025/1-619 LRIPVGNDLN ASNACIYNNA DDIVGMEASS MPSADLYGIS DPNMLSNCSV ENSBTAP00000020447/1-589 LEM---SDLN VSNACIYNNT NDIGRMEASS VSPADLYSIS DASMLPNCPV ENSTTRP00000012662/1-585 LEMSVVSDLN VSNACIYNNT NDIGRMEASS VSPADLYGIS DASMLPNCPV BACU013703/1-492 LEMSVVSDLN VSNACIYNNT NDIGRMEASS VSPADLYGIS DASMLPNCPV bmy_03006T0/1-444 LEMSVVSDLN VSNACIYNNT NDIGRMEASS VSPADLYGIS DASMLPNCPV 501 550 ENSP00000295025/1-619 NMMTTSSDSM GETDNPRLLS MNLENPSCNS VLDPRDLRQL HQMSSSSMSA ENSBTAP00000020447/1-589 NMITPSNDSM RETDNPRLVS MNLENPSCNS VLDPRDLRQL HQMSPSSMST ENSTTRP00000012662/1-585 NMITPSNDSM RETDNPRLVS MNLENPACTS VLDPRDLRQL HQMSSSRMSA BACU013703/1-492 NMITPSNDSM RETDNPRLVS MNLENPACTS VLDPRDLRQL HQMSSSSMSA bmy_03006T0/1-444 NMITPSNDSM RETDNPRLVS MNLENPACTS VLDPRDLRQL HQMSSSSMSA 551 600 ENSP00000295025/1-619 GANSNTTVFV SQSDAFEGSD FSCADNSMIN ESGPSNSTNP NSHGFVQDSQ ENSBTAP00000020447/1-589 VTSSSTTAYV AQSEAFEGSD FNCADNSMIN EAGPSNSTNA NSHGFGPNSQ ENSTTRP00000012662/1-585 VASSSTTAFV SQSEAFEGSD FNCADNSMIN ESGPSNGTNP NSHSFVQNSQ BACU013703/1-492 VASSSTTAFV SQSEAFEGSD FNCADNSMIN ESGPSNGTNP NSHSFVQNSQ bmy_03006T0/1-444 VASSSTTAFV SQSEAFEGSD FNCADNSMIN ESGPSNGTNP NSHSFVQNSQ 601 650 ENSP00000295025/1-619 YSGIGSMQNE QLSDSFPYEF FQV-- ENSBTAP00000020447/1-589 YSGIGAMQNE QLSDSFAFEF FKVNL ENSTTRP00000012662/1-585 YSGIGSMQNE QLSDSFAFEF FQ--- BACU013703/1-492 YSGIGTMQNE QLSDSFAFEF FQVNL bmy_03006T0/1-444 YSGIGTMQNE QLSDSFAFEF FQVNL