KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:11:37 2014 Check: 00 .. Name: ENSBTAP00000020449/1-278 Len: 278 Check: 1112 Weight: 1.00 Name: ENSTTRP00000014935/1-176 Len: 278 Check: 4059 Weight: 1.00 Name: bmy_02214T0/1-190 Len: 278 Check: 7203 Weight: 1.00 Name: BACU011654/1-278 Len: 278 Check: 2141 Weight: 1.00 // 1 50 ENSBTAP00000020449/1-278 MSTGGSPVRA YDFLLKFLLV GDSDVGKGEI LASLQDGAAE SPYGHPAGID ENSTTRP00000014935/1-176 MSASGSLVRA YDFLLKFLLV GDSD-GEGEI LASLQDDTAE SPYGHLAXXX bmy_02214T0/1-190 ---------- ---------- ---------- ---------- ---------- BACU011654/1-278 MSTGGSPVRA YDFLLKFLLV GDSDVGKGEI LASLQDGAAE SPYGHPAGID 51 100 ENSBTAP00000020449/1-278 YKTTTILLDG RRVKLQLWDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW ENSTTRP00000014935/1-176 XXXXXXXXXX XXXXXXXXDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW bmy_02214T0/1-190 ---------- ---------- ---------- --------GV ILVYDIANRW BACU011654/1-278 YKTTTILLDG RRVKLQLWDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW 101 150 ENSBTAP00000020449/1-278 SFDGIDRWIK EINEHAPGVP KILVGNRLHL AFKRQVPTEQ AQAYAERLGV ENSTTRP00000014935/1-176 SFDGIDRWIN EINEHAPGVP KILVGNRLHL AFKRQVPTEQ AQAYAERLGV bmy_02214T0/1-190 SFDGIDRWIK EINEHAPGVP KILVGNRLHL AFKRQVPTEQ AQAYAERLGV BACU011654/1-278 SFDGIDRWIK EINEHAPGVP KILVGNRLHL AFKRQVPTEQ AQAYAERLGV 151 200 ENSBTAP00000020449/1-278 TFFEVSPLCN FNITESFMEL ARIVLLRHGM DRLWRPSKVL SLQDLCCRAV ENSTTRP00000014935/1-176 TFFEVSPLCN INVTESFMEL ARIVLLR--- ---------- ---------- bmy_02214T0/1-190 TFFEVSPLCN FNITESFMEL ARIVLLRHGM DRLWRPSKVL SLQDLCCRAV BACU011654/1-278 TFFEVSPLCN FNITESFMEL ARIVLLRHGM DRLWRPSKVL SLQDLCCRAV 201 250 ENSBTAP00000020449/1-278 VSCTPAHLLD RLPLPTALRS HLKSFSMATG LSARMAHGRP CSLASGSSHK ENSTTRP00000014935/1-176 ---------- ---------- ---------- ---------- ---------- bmy_02214T0/1-190 VSCTPVHLVD RLPLPTALRS HLKSFSMASG LNARVMHGRP CSLVTSSGHK BACU011654/1-278 VSCTPVHLVD RLPLPTALRS HLKSFSMASG LNARVMHGRP CSLTTSSGHK 251 300 ENSBTAP00000020449/1-278 RTSLRKAKGT HLPQSPPRRC SRNNCKVS ENSTTRP00000014935/1-176 ---------- ---------- -------- bmy_02214T0/1-190 RTSLRKAKAA HLPQSPPRHC TRNSCKVS BACU011654/1-278 RTSLRKAKAA HLPQSPPRRC TRNSCKVS