KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:38 2014 Check: 00 .. Name: ENSP00000269373/1-309 Len: 586 Check: 8374 Weight: 1.00 Name: ENSBTAP00000020456/1-309 Len: 586 Check: 9528 Weight: 1.00 Name: BACU011655/1-506 Len: 586 Check: 9495 Weight: 1.00 Name: bmy_02213T0/1-389 Len: 586 Check: 3421 Weight: 1.00 Name: ENSTTRP00000003418/1-309 Len: 586 Check: 9356 Weight: 1.00 // 1 50 ENSP00000269373/1-309 MEELLRRELG CSSVRATGHS GGGCISQGRS YDTDQGRVFV KVNPKAEARR ENSBTAP00000020456/1-309 MEELLKRELG CDSVKATGHS GGGCISQGQS YDTDKGRVFV KVNSKPEARR BACU011655/1-506 MEELLKRELG CGSVKATGHS GGGCISQGRS YDTDRGRVFV KVNPKAEAKR bmy_02213T0/1-389 MEELLKRELG CGSVKATGHS GGGCISQGRS YDTDRGRVFV KVNPKAEAKR ENSTTRP00000003418/1-309 MEELLKRELG CGSVKATGHS GGGCISQGRS YDTDRGRVFV KVNPKAEAKR 51 100 ENSP00000269373/1-309 MFEGEMASLT AILKTNTVKV PKPIKVLDAP GGGSVLVMEH MDMRHLSSHA ENSBTAP00000020456/1-309 MFEGEVASLT AILRTGTVKV PKPIKVLDAP GGGSMLVMEH LDMRHLSSHA BACU011655/1-506 MFEGEMASLT AILKTGTVKV PKPIKVLDAP GGGSMLVMEH LDMRYLSSHA bmy_02213T0/1-389 MFEGEMASLT AILKTGTVKV PKPIKVLDAP GGGSMLVMEH LDMRYLSSHA ENSTTRP00000003418/1-309 MFEGEMASLT AILKTGTVKV PKPIKVLDAP GGGSMLVMEH LDMRYLSSHA 101 150 ENSP00000269373/1-309 AKLGAQLADL HLDNKKLGEM RLKEAGTV-- ---------- ------GRGG ENSBTAP00000020456/1-309 AKLGTQLADL HLDNKRLGET LQKEAGIV-- ---------- ------GRRD BACU011655/1-506 AKLGTQLADL HLDNKRLGET LQKEAGTV-- ---------- ------GKGG bmy_02213T0/1-389 AKLGTQLADL HLDNKRLGET LQKEAGTVGM AVGPRDPPRG RHLASMGKGG ENSTTRP00000003418/1-309 AKLGTQLADL HLDNKRLGET LQKEAGTV-- ---------- ------GKGG 151 200 ENSP00000269373/1-309 GQEERPFVAR FGFDVVTCCG YLPQ------ ---------- ---------- ENSBTAP00000020456/1-309 ELVARPFVAQ FGFDVVTCCG YLPQ------ ---------- ---------- BACU011655/1-506 GQVERPFVDQ FGFDVVTCCG YLPQ------ ---------- ---------- bmy_02213T0/1-389 GQVERPFVDQ FGFDVVTCCG YLPQVSDTTI LPAFPSQASR SETAAESTPS ENSTTRP00000003418/1-309 GQVERPFVDQ FGFDVVTCCG YLPQ------ ---------- ---------- 201 250 ENSP00000269373/1-309 ---------- ---------- ---------- ------VNDW QEDWVVFYAR ENSBTAP00000020456/1-309 ---------- ---------- ---------- ------VNDW QQDWVTFYAR BACU011655/1-506 ---------- ---------- ---------- ------VNDW QRDWVTFYAR bmy_02213T0/1-389 LFFGEICSRY EEYPPHMLGK LRGAEKDQQV RILDIKVNDW QRDWVTFYAR ENSTTRP00000003418/1-309 ---------- ---------- ---------- ------VNDW QRDWVTFYAR 251 300 ENSP00000269373/1-309 QRIQPQMDMV EKESGDREAL QLWSALQLKI PDLFRDLEII PALLHGDLWG ENSBTAP00000020456/1-309 QRIQPQMDLV EQRSGDREAR ELWAALQLKI PDLFHDLDII PALLHGDLWG BACU011655/1-506 QRIQPQMDLL EQGSGDREAR ELWTALQLKI PDLFHDLDIV PALLHGDLWG bmy_02213T0/1-389 QRIQPQMDLL EQGSGDREAR ELWAALQLKI PDLFHDLDIV PALLHGDLWG ENSTTRP00000003418/1-309 QRIQPQMDLL EQGSGDREAR ELWAALQLKI PDLFHDLDIV PALLHGDLWG 301 350 ENSP00000269373/1-309 GNVAEDSSGP VIFDPASFYG HSEYELAIAG MFGGFSSSFY SAYHGKIPKA ENSBTAP00000020456/1-309 GNVAEDSSGP IIFDPASFYG HSEYELAIAG MFGGFSSAFY SAYHSKIPKA BACU011655/1-506 GNVAEDSSGP IIFDPASFYG HSEYELAIAG MFGGFSGSFY SAYHSKVPKA bmy_02213T0/1-389 GNVAEDSSGP IIFDPASFYG HSEYELAIAG MFGGFSGSFY SAYHSKVPKA ENSTTRP00000003418/1-309 GNVAEDSSGP IIFDPASFYG HSEYELAIAG MFGGFSGSFY SAYHSKVPKA 351 400 ENSP00000269373/1-309 PGFEKRLQLY QLFHYLNHWN HFGSG----- ---------- ---------- ENSBTAP00000020456/1-309 PGFEKRLKLY QLFHYLNHWN HFGSG----- ---------- ---------- BACU011655/1-506 PGFEKRLKLY QLFHYLNHWN HFGSGQASKL GDQMADLHLY NQKLREKLRE bmy_02213T0/1-389 PGFEKRLKLY QLFHYLNHWN HFGSG----- ---------- ---------- ENSTTRP00000003418/1-309 PDFEKRLKLY QLFHYLNHWN HFGSG----- ---------- ---------- 401 450 ENSP00000269373/1-309 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020456/1-309 ---------- ---------- ---------- ---------- ---------- BACU011655/1-506 EENRVGQRAE GAGPQYVTKF GFHTVTCCGF IPQVNDWQDD WPTFFTQHRL bmy_02213T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003418/1-309 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000269373/1-309 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020456/1-309 ---------- ---------- ---------- ---------- ---------- BACU011655/1-506 QAQLDLIEKD YADREARELW SQLQVKIPDL FCGLEIVPAL LHGDLWSGNV bmy_02213T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003418/1-309 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000269373/1-309 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020456/1-309 ---------- ---------- ---------- ---------- ---------- BACU011655/1-506 AEDDTGPIIY DPASFYGHSE FELAIALMFG GFPRPFFTAY HRKVPKAPGF bmy_02213T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003418/1-309 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000269373/1-309 ---------- ---------- --YRGSSLNI MRNLVK ENSBTAP00000020456/1-309 ---------- ---------- --YRGSSLSI MRNLVT BACU011655/1-506 ERRLLLYQLF NYLNHWNHFG KQYRSPSLGT MRKLLK bmy_02213T0/1-389 ---------- ---------- --YRGSSLSI MRNLIK ENSTTRP00000003418/1-309 ---------- ---------- --YRGSSLSI MRNLIK