KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:11:49 2014 Check: 00 .. Name: ENSBTAP00000020505/1-121 Len: 180 Check: 6485 Weight: 1.00 Name: bmy_14461T0/1-180 Len: 180 Check: 2782 Weight: 1.00 Name: BACU018459/1-144 Len: 180 Check: 9002 Weight: 1.00 Name: ENSTTRP00000001142/1-144 Len: 180 Check: 9002 Weight: 1.00 // 1 50 ENSBTAP00000020505/1-121 MEREGSGGSG ASAGLLQQIL SLKLVPRVGN GTLCPNSTSL CSFPEMWYGV bmy_14461T0/1-180 MEHEGSGDSG GSAGLLQQIL SLKLVPRVGN GTLCPNSTSL CSFPEMWYGV BACU018459/1-144 MEHEGSGDSG GSAGLLQQIL SLKLVPRVGN GTLCPNSTSL CSFPEMWYGV ENSTTRP00000001142/1-144 MEHEGSGDSG GSAGLLQQIL SLKLVPRVGN GTLCPNSTSL CSFPEMWYGV 51 100 ENSBTAP00000020505/1-121 FLWALVSSLF FHVPAGLLAL FTLRHHKYG- ---------- ---------- bmy_14461T0/1-180 FLWALVSSLF FHVPAGLLAL FTLRHHKYGR FMSVSILLMG IVGPITAGIL BACU018459/1-144 FLWALVSSLF FHVPAGLLAL FTLRHHKYGR FMSVSILLMG IVGPITAGIL ENSTTRP00000001142/1-144 FLWALVSSLF FHVPAGLLAL FTLRHHKYGR FMSVSILLMG IVGPITAGIL 101 150 ENSBTAP00000020505/1-121 ---------- ---------- ---------- --------AA IAGVYRAAGK bmy_14461T0/1-180 TTSFCDQGEF RLEHFEEVTV TNIIKMINDV GNRKDSPSAA IAGVYRAAGK BACU018459/1-144 T--------- ---------- ---------- -------SAA IAGVYRAAGK ENSTTRP00000001142/1-144 T--------- ---------- ---------- -------SAA IAGVYRAAGK 151 200 ENSBTAP00000020505/1-121 EMIPFEALTL GTGQTFCVVV VSFLRILATL bmy_14461T0/1-180 EMIPFEALTL GTGQTFCVVV VSFLRILATL BACU018459/1-144 EMIPFEALTL GTGQTFCVVV VSFLRILATL ENSTTRP00000001142/1-144 EMIPFEALTL GTGQTFCVVV VSFLRILATL