KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:49 2014 Check: 00 .. Name: ENSTTRP00000001713/1-749 Len: 953 Check: 1162 Weight: 1.00 Name: ENSP00000381636/1-949 Len: 953 Check: 6061 Weight: 1.00 Name: ENSBTAP00000020511/1-808 Len: 953 Check: 7217 Weight: 1.00 Name: bmy_21960T0/1-815 Len: 953 Check: 3085 Weight: 1.00 Name: BACU015956/1-808 Len: 953 Check: 6694 Weight: 1.00 // 1 50 ENSTTRP00000001713/1-749 ---MEFSWRG GFEARRLLLS LLLLTAWETG SGQVHYSVSE EAKHGSFVGR ENSP00000381636/1-949 ---MFGFQRR GLGTPRLQLW LLLLEFWEVG SGQLHYSVSE EAKHGTFVGR ENSBTAP00000020511/1-808 ---MSATQRS GLGNGRLLLS LLLLAAWEAG SGQVHYSVPE EAKHGTFVGR bmy_21960T0/1-815 MYAMFASERR GLDTGRLLLS LLLLAAWEAG SGQVYYSIPE EAKHGTFVGR BACU015956/1-808 MYAMFASERR ELDTGRLLLS LLLLAVWEAG SGQVYYSIPE EAKHGTFVGR 51 100 ENSTTRP00000001713/1-749 IAQDLGLELT ELVPRLFRVA SKGRGDLLEV NLQNGILFVN SRIDREELCG ENSP00000381636/1-949 IAQDLGLELA ELVQRLFRVA SKTHGDLLEV NLQNGILFVN SRIDREELCG ENSBTAP00000020511/1-808 IAQDLGLELA ELVPRLFRVA SKGRGDLLEV NLQNGILFVN SRIDREELCG bmy_21960T0/1-815 IAQDLGLELA ELVPRLFRVA SKGRGDLLEV NLQNGILFVN SRIDREELCG BACU015956/1-808 IAQDLGLELA ELVPRLFRVA SKGRGDLLEV NLQNGILFVN SRIDREELCG 101 150 ENSTTRP00000001713/1-749 RSAECSIHLE VIVDRPLQVF HVEVEVKDIN DNPPVFR-GE QKVLISESAP ENSP00000381636/1-949 QSAECSIHLE VIVDRPLQVF HVNVEVKDIN DNPPVFSLRE QKLLIAESKQ ENSBTAP00000020511/1-808 RSAECSIHLE VIVDRPLQVF HVEVEVKDIN DNPPVFSLRE QKLLISESKQ bmy_21960T0/1-815 RSAECSIHLE VIVDRPLQVF HVEVEVKDIN DNPPVFSLRE QKLLISESKQ BACU015956/1-808 RSAECSIHLE VIVDRPLQVF HVEVEVKDIN DNPPVFSLRE QKLLISESKQ 151 200 ENSTTRP00000001713/1-749 LDSRFPLEGA SDADIGLNSL VTYRLSLNEY FTLKVITKTD KSVLPELILR ENSP00000381636/1-949 SDSRFPLEGA SDADIEENAL LTYRLSKNEY FSLDSPTNGK QIKRLSLILK ENSBTAP00000020511/1-808 PDSRFPLEGA SDADIGENAQ LTYRLSKNEY FSLELLINSK PTKKLSLTLK bmy_21960T0/1-815 PDSHFPLEGA SDADIGENAQ LTYRLSQNEH FSLELPTNSK QTKRLSLTLK BACU015956/1-808 PDSHFPLEGA SDADIGENAQ LTYRLSQNEH FSLELPTNSK QTKRLSLTLK 201 250 ENSTTRP00000001713/1-749 KSLDREEMPE LNILLTALDG GKPELTGSVQ IQITILDVND NAPEFDTPGY ENSP00000381636/1-949 KSLDREKTPE LNLLLTATDG GKPELTGTVR LLVQVLDVND NDPEFDKSEY ENSBTAP00000020511/1-808 KSLDREKTPE FNLLLTAVDG GKPELTGTVE LFVCVLDIND NDPEFEQSEY bmy_21960T0/1-815 KSLDREKTPE LNLLLTAADG GKPELTGTVH LFVRVLDIND NDPEFEQSEY BACU015956/1-808 KSLDREKTPE LNLLLTAADG GKPELTGTVH LFVRVLDIND NDPEFEQSEY 251 300 ENSTTRP00000001713/1-749 KVVLFENIPN NTRVIQLNAS DLDEGPNREI SYGIRMILPV SEKCMFSINA ENSP00000381636/1-949 KVSLMENAAK ETLVLKLNAT DRDEGVNGEV TYSLMSIKP- NGRHLFTLDQ ENSBTAP00000020511/1-808 KVRLMENAAK ETLVIQLNAT DQDEGVNGEV TYSLMSIKP- KGKPLFTLDE bmy_21960T0/1-815 KVRLMENAAK ETPVITLNAT DQDEGVNGEV TYSLMSIKP- SGKGLFTLHE BACU015956/1-808 KVRLMENAAK ETLVIKLNAT DQDEGINGDV TYSLMSIKP- NGKSLFTLHE 301 350 ENSTTRP00000001713/1-749 ETGEIRIYGK LDFEENNEYE IQVNAIDKGI PSMAGHCTVL VEVLDLNDNT ENSP00000381636/1-949 NNGEVRVNGT LDYEENKFYK IEVQATDKGT PPMAGHCTVW VEILDTNDNS ENSBTAP00000020511/1-808 NNGEVKVNGT LDYEENKFYE IEVQATDKGN PPMAGHCTVW VEILDANDNS bmy_21960T0/1-815 NSGEVRVNGT LDYEENKFYE IDVQATDKGN PPMAGHCTVW VEILDANDNA BACU015956/1-808 NSGEVRVNGT LDYEENKFYE IDVQATDKGN PPMAGHCTVW VEILDANDNA 351 400 ENSTTRP00000001713/1-749 PEVMITSLSL PVREDAQVGT VIALISVSDR DSGANGQVTC SLTPQVPFKL ENSP00000381636/1-949 PEVAVTSLSL PVREDAQPST VIALISVSDR DSGVNGQVTC SLTPHVPFKL ENSBTAP00000020511/1-808 PEITVTSLSL PVREDTQPST VIALISVFDR DSGDNGQVIC FLTPNVPFKI bmy_21960T0/1-815 PEVTVTSLSL PVREDTQPST VIALISVSDR DSGANGQVIC SLTPSVPFKI BACU015956/1-808 PEVTVTSLSL PVREDTQPST VIALISVSDR DSGANGQVIC SLTPSVPFKI 401 450 ENSTTRP00000001713/1-749 VSTFKKYYSL VLDSALDREN MANYEVVVTA RDAGSPSLSA TASLSVEVAD ENSP00000381636/1-949 VSTFKNYYSL VLDSALDREN VWAYELVVTA RDGGSPSLWA TARVSVEVAD ENSBTAP00000020511/1-808 VSTFKNYYSL VLDGTLDRES VSVYKLVVTA RDGGSPSLSA TASMSVEVAD bmy_21960T0/1-815 VSTFKNYYSL VLDSALDRES VSVYKLVVTA RDGGSPSLSA TASVSVEVAD BACU015956/1-808 VSTFKNYYSL VLDSALDRES VSVYKLVVTA RDGGSPSLSV TASVYVEVSD 451 500 ENSTTRP00000001713/1-749 VNDNAPAFAQ PEYTVFVKEN NPPGCHIFTV SARDADAQEN ALVSYSLVER ENSP00000381636/1-949 VNDNAPAFAQ PEYTVFVKEN NPPGCHIFTV SARDADAQEN ALVSYSLVER ENSBTAP00000020511/1-808 VNDNAPAFAQ PEYTVFVKEN NPPGCHIFTV SAWDADAQEN ALVSYSLVER bmy_21960T0/1-815 VNDNAPAFXQ PEYTVXVKEN NPPGCHIFTV SARDADAQEN ALVSYSLVER BACU015956/1-808 VNDNAPAFPQ PEYTVLVKEN NPPGCHIFTV SARDADAQEN ALVSYSLVER 501 550 ENSTTRP00000001713/1-749 RVGERALSSY VSVHAESGKV YALQPLDHEE LELLQFQVSA RDAGVPPLGS ENSP00000381636/1-949 RLGDRALSSY VSVHAESGKV YALQPLDHEE LELLQFQVSA RDAGVPPLSS ENSBTAP00000020511/1-808 RVGERALSSF VSVHAESGKV YALQPLDREE LELLQFQVSA RDAGVPPLGS bmy_21960T0/1-815 RVGERALSSY VSVHAESGKV YALQPLDHEE LELLQFQVSA RDAGVPPLGS BACU015956/1-808 RVGERALSSY VSVHAQSGKV YALQPLDHEE LELLQFQVSA RDAGVPPLGS 551 600 ENSTTRP00000001713/1-749 NVTLQVFVLD ENDNAPALLL PGSGGGAGAL SQLVARSVGA GHVVAKVRAV ENSP00000381636/1-949 NVTLQVFVLD ENDNAPALLA TQAGSAGGAV NKLVPRSVGA GHVVAKVRAV ENSBTAP00000020511/1-808 NVTLQVFVLD ENDNAPALLP PGPGGGPSAV SQVVSRSVDA GHVVAKVRAV bmy_21960T0/1-815 NVTLQVFVLD ENDNAPALLL PGPGGGAGAL SQLVARSVGA GHVVAKVRAV BACU015956/1-808 NVTLQVFVLD ENDNAPALLL PGPGGGAGAL SQRVARSVGA GHVVAKVRAV 601 650 ENSTTRP00000001713/1-749 DADSGYNAWL SYELQPAVGG ARSPFRVGLY TGEISTTRAL DEADAPRQRL ENSP00000381636/1-949 DADSGYNAWL SYELQPAAGG SRIPFRVGLY TGEISTTRAL DEADSPRHRL ENSBTAP00000020511/1-808 DADSGYNAWL SYELQPAAGG ARSPFRVGLY TGEISTTRAL DEADAPRQRL bmy_21960T0/1-815 DADSGYNAWL SYELQPAAGG ARSPFRVGLY TGEISTTRAL DEADAPRQRL BACU015956/1-808 DADSGYNAWL SYELQPAAGG AHSPFRVGLY TGEISTTRAL DEADAPRQRL 651 700 ENSTTRP00000001713/1-749 LVLVKDHGEP ALTATATVLL SLEDSGQAPK ASMRASMGAA GAEAALVDVN ENSP00000381636/1-949 LVLVKDHGEP ALTATATVLV SLVESGQAPK ASSRTLAGAA SPEAALVDVN ENSBTAP00000020511/1-808 LVLVKDHGEP ALTATATVLL SLEDSGQAPK ASSRALSGAA GAETALVDVN bmy_21960T0/1-815 LVLVKDHGEP ALTATATVLL SLEDSGQAPK ASSRASTGAA GAEAALVDVN BACU015956/1-808 LVLVKDHGEP ALTATATVLL SLEDSGQAPK ASSRASTGAA GAEAALVDVN 701 750 ENSTTRP00000001713/1-749 VYLIIAICAV SSLLVLTLLL YTALRCSA-- ---------- ---------- ENSP00000381636/1-949 VYLIIAICVV SSLLVLTLLL YTALWWSATP TEGACAPGKP TLVCSRAVGS ENSBTAP00000020511/1-808 VYLIIAICAV SSLLVLTLLL YTALRCSAPP SEGACGPVKP RLVCSSAMGS bmy_21960T0/1-815 VYLIIAICAV SSLLVLTLLL YTALRCSAPP SEGACGPGKP TLVCSSAVGS BACU015956/1-808 VYLIIAICAV SSLLVLTLLL YTALRCSAPP SEGACGPGKP TLVCSSAVGS 751 800 ENSTTRP00000001713/1-749 ---------- ------PPKA DLMAFSPCLQ PS-----GED CKSASE---- ENSP00000381636/1-949 WSYSQQRRQR VCSEEGPPKT DLMAFSPSLP LGLNKEEEGE RQEPGSNHPG ENSBTAP00000020511/1-808 WSYSQERRQR VCSGEGPPKT DLMAFSPSLP PGLDREVGEE RQEAGSNHSG bmy_21960T0/1-815 WSYSQQRRQR VCSGEGPPKA DLMAFSPSLP PGLDREVGEE KQEAGSNHPG BACU015956/1-808 WSYSQQRRQR VCSGEGPPKA DLMAFSPSLP PGLDREVGEE RQEAGSNHPG 801 850 ENSTTRP00000001713/1-749 ---------- ---------- ---------- ---------- ---------- ENSP00000381636/1-949 QPRQPNPDWR YSASLRAGMH SSVHLEEAGI LRAGPGGPDQ QWPTVSSATP ENSBTAP00000020511/1-808 L--------- ---------- ---------- ---------- ----VSSINP bmy_21960T0/1-815 Q--------- ---------- ---------- ---------- ----VSSIDS BACU015956/1-808 Q--------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000001713/1-749 ---------- ---------- ---------- ---------- ---------- ENSP00000381636/1-949 EPEAGEVSPP VGAGVNSNSW TFKYGPGNPK QSGPGELPDK FIIPGSPAII ENSBTAP00000020511/1-808 FP-------- ---------- ---------- ---------- ---------- bmy_21960T0/1-815 HL-------- ---------- ---------- ---------- ---------- BACU015956/1-808 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000001713/1-749 ---------- ---------- ---------- ---------- ---------- ENSP00000381636/1-949 SIRQEPTNSQ IDKSDFITFG KKEETKKKKK KKKGNKTQEK KEKGNSTTDN ENSBTAP00000020511/1-808 ---------- --LLE----- ---------- ---------- ---------- bmy_21960T0/1-815 ---------- --LKSMLNF- ---------- ---------- ---------- BACU015956/1-808 ---------- --MREFLAFS ---------- ---------- ---------- 951 1000 ENSTTRP00000001713/1-749 --- ENSP00000381636/1-949 SDQ ENSBTAP00000020511/1-808 --- bmy_21960T0/1-815 --- BACU015956/1-808 ---