KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:51 2014 Check: 00 .. Name: ENSP00000286719/1-753 Len: 1071 Check: 8331 Weight: 1.00 Name: ENSTTRP00000001774/1-740 Len: 1071 Check: 3477 Weight: 1.00 Name: ENSBTAP00000020539/1-660 Len: 1071 Check: 5050 Weight: 1.00 Name: bmy_10633T0/1-611 Len: 1071 Check: 5513 Weight: 1.00 Name: BACU000798/1-999 Len: 1071 Check: 7952 Weight: 1.00 // 1 50 ENSP00000286719/1-753 ---------- ---------- ---------- ---------- -------MGS ENSTTRP00000001774/1-740 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 ---------- ---------- ---------- ---------- --------LG bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 MLQHFDRDFL RAAMARIIGD NVPKWVLGLI RKAVWELELF LPQPFTDEIR 51 100 ENSP00000286719/1-753 GTSTQHHFAF QNA------- ---------- ---------- ---------- ENSTTRP00000001774/1-740 ---------F QNA------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 PRSPISQTGF SIC------- ---------- ---------- ---------- bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 GQCDALNFNL ADCILLNLAY ESTAFCTSIV AQDSKGNVYH GRNLDYSFGN 101 150 ENSP00000286719/1-753 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001774/1-740 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 ---------- ---------- ---------- ---------- ---------- bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 ILRNLTVDVQ FIKNGQIAFT GTTFIGYVGL WTGQSPHKFT VSGDERDKGW 151 200 ENSP00000286719/1-753 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001774/1-740 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 ---------- ---------- ---------- ---------- ---------- bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 WWENMIAALF QRHSPVSWLI RTTLSESENF EAAVYKLAKT PLIADVYYIV 201 250 ENSP00000286719/1-753 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001774/1-740 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 ---------- ---------- ---------- ---------- ---------- bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 GGTYPREGVV ITRNRDGPAD IWPLDPLNGA WFRVETNYDH WKPVPKRDDR 251 300 ENSP00000286719/1-753 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001774/1-740 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020539/1-660 ---------- ---------- ---------- ---------- ---------- bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 RTPAIKALNA TGQANLSLET LFQVLSVFPV YNKPDLTEVR AACCWKAGSP 301 350 ENSP00000286719/1-753 ---------- ----ERAFKA AALIQRWYRR YVARLEMRRR CTWSIFQSIE ENSTTRP00000001774/1-740 ---------- ----EKAFKA AVLIQRWYRR YMARLEMRRH CTWSIFQSIE ENSBTAP00000020539/1-660 ---------- ----VTAFRA AALIQRWYRR YVARLEMRRR CTWSIFQSIE bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 ECLALAVGIL TGFLEEAFKA AALIQRWYRR YMARLEMRRH CTWSIFQSIE 351 400 ENSP00000286719/1-753 YAGQQDQVKL HDFFSYLMDH FIPSSHNDRD FLTRIFTEDR FAQDSEMKKC ENSTTRP00000001774/1-740 YAGQQDQVKL HNFFSYLVDH FTPNNHNERD FLNRMFTEER SPQDSEMENC ENSBTAP00000020539/1-660 YAGQQDQVKL HNFFSYLVDH FTPSSHNERE -LNRQFV--- -PEASETQNC bmy_10633T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU000798/1-999 YAGQQDQVKL HNFFSYLVDH FTPSSHNERD FLNRMFTEER SPRDSEMENC 401 450 ENSP00000286719/1-753 SDYESIEVPD SYTGPRLSFP LLPDHATALV EAFRLKQQLH ARYVLNLLYE ENSTTRP00000001774/1-740 RDYESIEVPD SYTGPRLSFP LLPDHATALV EAFRVKQRLH ARYVLNLLYE ENSBTAP00000020539/1-660 GDYDSIEVPD SYTGPRLSFP LLPDHATALV EAFRRKQRLH ARYVLNLLHE bmy_10633T0/1-611 ---------- ---------- ---------- -------RLH ARYVLNLLYE BACU000798/1-999 RDYESIEVLE SYTGPRLSFP LLPDHATALV EAFRVKQRLH ARYVLNLLYE 451 500 ENSP00000286719/1-753 TKKHLVQLPN INRVSTCYSE EITVCGDLHG QLDDLIFIFY -KNGLPSPER ENSTTRP00000001774/1-740 ARKHLVQLPN INRVSTCYSE EITVCGDLHG QLDDLIFIFY -KNGLPSPER ENSBTAP00000020539/1-660 ARKHLVQLPN INQVSTCYSE EITVCGDLHG QLDDLIFIFY KKNGLPSPER bmy_10633T0/1-611 ARKHLVQLPN INRVSTCYSE EITVCGDLHG QLDDLIFIFH -KNGLPSPER BACU000798/1-999 ARKHLVQLPN INRVSTCYSE EITVC----- ---------- --------ER 501 550 ENSP00000286719/1-753 SYVFNGDFVD RGKDSVEILM ILFAFMLVYP KEFHLNRGNH EDHMVNLRYG ENSTTRP00000001774/1-740 AYVFNGDFVD RGKDSVEILM VLFAFMLVYP KEFHLNRGNH EDHMVNLRYG ENSBTAP00000020539/1-660 AYVFNGDFVD RGKDSVEILM VLFAFMLVYP KEFHLNRGNH EDHIVNLRYG bmy_10633T0/1-611 AYVFNGDFVD RGKDSVEILM VLFAFMLVYP KEFHLNRGNH EDHMVNLRYG BACU000798/1-999 AYVFNGDFVD RGKDSVEILM VLFAFMLVYP KEFHLNRGNH EDHMVNLRYG 551 600 ENSP00000286719/1-753 FTKEVMNKYK VHGKEILRTL QDVFCWLPLA TLIDEKVLIL HGGVSDITDL ENSTTRP00000001774/1-740 FTKEVMHKYK THGKKILKLL QDVFCWLPLA TLVDEKVLIL HGGVSDMTDL ENSBTAP00000020539/1-660 FTKEVMHKYK IHGKKILKLL QDVFCWLPLA TLVDEKVLIL HGGVSDRTDL bmy_10633T0/1-611 FTKEVMHKYK THGKKILKLL QDVFCWLPLA TLVDEKVLIL HGGVSDMTDL BACU000798/1-999 FTKEVMHKYK THGKKILKLL QDVFCWLPLA TLVDEKVLIL HGGVSDMTDL 601 650 ENSP00000286719/1-753 ELLDKIERSK IVST---MRC KTRQKSEKQM EEKRRANQKS SAQGPIPWFL ENSTTRP00000001774/1-740 EFLAKLDRHK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000020539/1-660 ELLAKLDRHK ---------- ---------- ---------- ---------- bmy_10633T0/1-611 EFLAKLDRHK IVST---MRC KTRKEHKKQ- AEKGKANQTS SAGRPSPWFL BACU000798/1-999 EFLAKLDRHK SVHTRTWLSC ---------- --------TS ALRPICRKFL 651 700 ENSP00000286719/1-753 PESRSLP-SS PLRLGSYKAQ KTSRSSSIPC SGSLDGRELS RQVRSSVELE ENSTTRP00000001774/1-740 XXXXXXX--- -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000020539/1-660 ---------- -MKEVLHKPT QISRKSSEQS KL-------- ---------- bmy_10633T0/1-611 PQSHSLP-TL PLRPSSQKAH RAGRSSSVPC RVPLDPNELS DWVQHSMDLE BACU000798/1-999 LLDYTLAQNS PCEPDLYLDV LVEHCGPQSS RVPLDPNELS HWARHSMDLE 701 750 ENSP00000286719/1-753 LERCRQQAGL LVTGEKEEPS RSASEADSEA GELRKPTQEE WRQVVDILWS ENSTTRP00000001774/1-740 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVVDILWS ENSBTAP00000020539/1-660 ----REAGGL ESAE------ ---SEVDSDA EEQPQPTPEE WRQVVDILWS bmy_10633T0/1-611 LESCRQQAGF PVIKEKEEPL PLASEADAEA EGQLEPTQEA WRQVVDILWS BACU000798/1-999 LERCRQQAGF PVIKEKEEPL PLASEADPEA EGGPEPTQEA WRQVVDILWS 751 800 ENSP00000286719/1-753 DPMAQEGCKA NTIRGGGCYF GPDVTQQLLQ KYNMQFLIRS HECKPEGYEF ENSTTRP00000001774/1-740 DPMAQEGCKA NTIRGGGCYF GPNVTERLLQ KYNLQFLIRS HECKPEGYEF ENSBTAP00000020539/1-660 DPMAQEGCRA NTVRGGGCYF GPNVTERLLQ KYHLQFLIRS HECKPEGYEF bmy_10633T0/1-611 DPMAQEGCKA NTIRGGGCYF GPNVTERLLQ KYNLQFLIRS HECKPEGYEF BACU000798/1-999 DPMAQAGCKA NTVRGGGCYF GPNVTERLLQ KYNLQFLIRS HECKPEGYEF 801 850 ENSP00000286719/1-753 CHNRKVLTIF SASNYYEVGS NRGAYVKLGP ALTPHIVQYQ ANKVTHTLTM ENSTTRP00000001774/1-740 CHSRKVLTIF SASNYYEVGS NRGAYVKLGP ALTPHIVQFQ ANKATHTLTM ENSBTAP00000020539/1-660 CHSRKVLTIF SASNYYEVGS NRGAYVKLGP ELTPHIMQFQ ANKATHMLTM bmy_10633T0/1-611 CHSRKVLTIF SASNYYEVGS NRGAYVKLGP ALTPHIVQFQ ANKATHTLTV BACU000798/1-999 CHGRKVLTIF SASNYYEVGS NRGAYVKLGP ALTPHIVQFQ ANKATHTLTM 851 900 ENSP00000286719/1-753 RQR------- --------IS RVEESALRAL REKLFAHSSD LLSEFKKHDA ENSTTRP00000001774/1-740 RQR------- --------IS RVGESALRAL REKLFAHSSD LLVEFKKHDK ENSBTAP00000020539/1-660 RQR------- --------IS RVEESALRAL REKLFAHSSD ILVEFKKHDK bmy_10633T0/1-611 RQRQDFSMND FQKDRIIVIS RVGESALRAL REKLFAHSSD LLVEFKKRDK BACU000798/1-999 RQRQ------ --------IS RVGESALRAL REKLFAHSSD LLVEFKKHDK 901 950 ENSP00000286719/1-753 DKVGLITLSD WAAAVESVLH LGLPWRMLRP QLVNSSADNM LEYKSWLKNL ENSTTRP00000001774/1-740 DKTGLITLSD WAAAVESVLH LGLPWRMLRP QLVSSLTDNK LEYKSWLKNL ENSBTAP00000020539/1-660 DETGLIALSD WAAAVESVLH LGLPWRMLRP QLVSSLTDNK LAYKSWLENL bmy_10633T0/1-611 DKTGLITLSD WAAAVESVLH LGLPWRMLRP QLVSSLTDNK LEYKSWLKNL BACU000798/1-999 DKTGLITLSD WAAAVESVLH LGLPWRMLRP QLVSSLTDNK LEYKSWLKNL 951 1000 ENSP00000286719/1-753 AKEQLSRENI QSSLLETLYR NRSNLETIFR IIDSDHSGFI SLDEFRQTWK ENSTTRP00000001774/1-740 AKEQFSHENI QSSLLEALYR NRSNLETIFR IIDSDHSGFI SLDEFRQTWK ENSBTAP00000020539/1-660 AKEKLSQQNI QSSLLETLYR NRSNLETIFR IIDSDHSGSI SLDEFRHTWK bmy_10633T0/1-611 AKEQFSHENI QSSLLEALYR NRSNLETIFR IIDSDHSGFI SLDEFRQTWK BACU000798/1-999 AKEQFSHENI QSSLLEALYR NRSNLETIFR IIDSDHSGFI SLDEFRQTWK 1001 1050 ENSP00000286719/1-753 LFSSHMNIDI TDDCICDLAR SIDFNKDGHI DINEFLEAFR LVEKSCPEGD ENSTTRP00000001774/1-740 LFSSHMNIDV TDDCICDLAR SIDFNKDGHI DINEFLEAFR LVEQSCSKGY ENSBTAP00000020539/1-660 LFSSHMNIDI TDDCICDLAR SIDFNKDGHI DINEFLEAFR LVEQSCSGGD bmy_10633T0/1-611 LFSSHMNIDV TDDCICDLAR SIDFNKDGHI DINEFLEAFR LVEQSCSKGY BACU000798/1-999 LFSSHMNIDV TDDCICDLAR SIDFNKDGHI DINEFLEAFR LVEQSCSKGY 1051 1100 ENSP00000286719/1-753 ASECPQATNA KDSGCSSPGA H ENSTTRP00000001774/1-740 ASDC-QATNT NNSDCSSPDI H ENSBTAP00000020539/1-660 VSDCPQVTNS S--------- - bmy_10633T0/1-611 ASDC------ ---------- - BACU000798/1-999 ASDC------ ---------- -