KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:51 2014 Check: 00 .. Name: ENSTTRP00000013879/1-499 Len: 591 Check: 5161 Weight: 1.00 Name: BACU002720/1-591 Len: 591 Check: 1419 Weight: 1.00 Name: bmy_19829T0/1-499 Len: 591 Check: 3307 Weight: 1.00 Name: ENSP00000433109/1-499 Len: 591 Check: 3074 Weight: 1.00 Name: ENSBTAP00000020543/1-499 Len: 591 Check: 3074 Weight: 1.00 // 1 50 ENSTTRP00000013879/1-499 MTVATGDPVD EAAALPGHPQ DTYDPEADHE CCERVVINIS GLRFETQLKT BACU002720/1-591 MTVATGDPVD EAAALPGHPQ DTYDPEADHE CCERVVINIS GLRFETQLKT bmy_19829T0/1-499 MTVATGDPVD EAAALPGHPQ DTYDPEADHE CCERVVINIS GLRFETQLKT ENSP00000433109/1-499 MTVATGDPAD EAAALPGHPQ DTYDPEADHE CCERVVINIS GLRFETQLKT ENSBTAP00000020543/1-499 MTVATGDPAD EAAALPGHPQ DTYDPEADHE CCERVVINIS GLRFETQLKT 51 100 ENSTTRP00000013879/1-499 LAQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR BACU002720/1-591 LAQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR bmy_19829T0/1-499 LAQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR ENSP00000433109/1-499 LAQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR ENSBTAP00000020543/1-499 LAQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR 101 150 ENSTTRP00000013879/1-499 PVNVPLDIFS EEIRFYELGE EAMEMFREDE GYIKEEE--- ---------- BACU002720/1-591 PVNVPLDIFS EEIRFYELGE EAMEMFREDE GYIKEEEXXX XXXXXXXXXX bmy_19829T0/1-499 PVNVPLDIFS EEIRFYELGE EAMEMFREDE GYIKEEE--- ---------- ENSP00000433109/1-499 PVNVPLDIFS EEIRFYELGE EAMEMFREDE GYIKEEE--- ---------- ENSBTAP00000020543/1-499 PVNVPLDIFS EEIRFYELGE EAMEMFREDE GYIKEEE--- ---------- 151 200 ENSTTRP00000013879/1-499 ---------- ---------- ---------- ---------- ---------- BACU002720/1-591 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19829T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSP00000433109/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020543/1-499 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000013879/1-499 ---------- ---------- ---------R PLPENEFQRQ VWLLFEYPES BACU002720/1-591 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX PLPENEFQRQ VWLLFEYPES bmy_19829T0/1-499 ---------- ---------- ---------R PLPENEFQRQ VWLLFEYPES ENSP00000433109/1-499 ---------- ---------- ---------R PLPENEFQRQ VWLLFEYPES ENSBTAP00000020543/1-499 ---------- ---------- ---------R PLPENEFQRQ VWLLFEYPES 251 300 ENSTTRP00000013879/1-499 SGPARIIAIV SVMVILISIV SFCLETLPIF RDENEDMHGS GVTFHTYSNS BACU002720/1-591 SGPARIIAIV SVMVILISIV SFCLETLPIF RDENEDMHGS GVTFHTYSNS bmy_19829T0/1-499 SGPARIIAIV SVMVILISIV SFCLETLPIF RDENEDMHGS GVTFHTYSNS ENSP00000433109/1-499 SGPARIIAIV SVMVILISIV SFCLETLPIF RDENEDMHGS GVTFHTYSNS ENSBTAP00000020543/1-499 SGPARIIAIV SVMVILISIV SFCLETLPIF RDENEDMHGS GVTFHTYSNS 301 350 ENSTTRP00000013879/1-499 TIGYQQSTSF TDPFFIVETL CIIWFSFEFL VRFFACPSKA GFFTNIMNII BACU002720/1-591 TIGYQQSTSF TDPFFIVETL CIIWFSFEFL VRFFACPSKA GFFTNIMNII bmy_19829T0/1-499 TIGYQQTTSF TDPFFIVETL CIIWFSFEFL VRFFACPSKA GFFTNIMNII ENSP00000433109/1-499 TIGYQQSTSF TDPFFIVETL CIIWFSFEFL VRFFACPSKA GFFTNIMNII ENSBTAP00000020543/1-499 TIGYQQSTSF TDPFFIVETL CIIWFSFEFL VRFFACPSKA GFFTNIMNII 351 400 ENSTTRP00000013879/1-499 DIVAIIPYFI TLGTELAEKP EDAQQGQQAM SLAILRVIRL VRVFRIFKLS BACU002720/1-591 DIVAIIPYFI TLGTELAEKP EDAQQGQQAM SLAILRVIRL VRVFRIFKLS bmy_19829T0/1-499 DIVAIIPYFI TLGTELAEKP EDAQQGQQAM SLAILRVIRL VRVFRIFKLS ENSP00000433109/1-499 DIVAIIPYFI TLGTELAEKP EDAQQGQQAM SLAILRVIRL VRVFRIFKLS ENSBTAP00000020543/1-499 DIVAIIPYFI TLGTELAEKP EDAQQGQQAM SLAILRVIRL VRVFRIFKLS 401 450 ENSTTRP00000013879/1-499 RHSKGLQILG QTLKASMREL GLLIFFLFIG VILFSSAVYF AEADERESQF BACU002720/1-591 RHSKGLQILG QTLKASMREL GLLIFFLFIG VILFSSAVYF AEADERESQF bmy_19829T0/1-499 RHSKGLQILG QTLKASMREL GLLIFFLFIG VILFSSAVYF AEADERESQF ENSP00000433109/1-499 RHSKGLQILG QTLKASMREL GLLIFFLFIG VILFSSAVYF AEADERESQF ENSBTAP00000020543/1-499 RHSKGLQILG QTLKASMREL GLLIFFLFIG VILFSSAVYF AEADERESQF 451 500 ENSTTRP00000013879/1-499 PSIPDAXXXX XXXXXXVGYG DMVPTTIGGK IVGSLCAIAG VLTIALPVPV BACU002720/1-591 PSIPDAFWWA VVSMTTVGYG DMVPTTIGGK IVGSLCAIAG VLTIALPVPV bmy_19829T0/1-499 PSIPDAFWWA VVSMTTVGYG DMVPTTIGGK IVGSLCAIAG VLTIALPVPV ENSP00000433109/1-499 PSIPDAFWWA VVSMTTVGYG DMVPTTIGGK IVGSLCAIAG VLTIALPVPV ENSBTAP00000020543/1-499 PSIPDAFWWA VVSMTTVGYG DMVPTTIGGK IVGSLCAIAG VLTIALPVPV 501 550 ENSTTRP00000013879/1-499 IVSNFNYFYH RETEGEEQAQ YLQVTSCPKI PSSPDLKKSR SASTISKSDY BACU002720/1-591 IVSNFNYFYH RETEGEEQAQ YLQVTSCPKI PSSPDLKKSR SASTISKSDY bmy_19829T0/1-499 IVSNFNYFYH RETEGEEQAQ YLQVTSCPKI PSSPDLKKSR SASTISKSDY ENSP00000433109/1-499 IVSNFNYFYH RETEGEEQAQ YLQVTSCPKI PSSPDLKKSR SASTISKSDY ENSBTAP00000020543/1-499 IVSNFNYFYH RETEGEEQAQ YLQVTSCPKI PSSPDLKKSR SASTISKSDY 551 600 ENSTTRP00000013879/1-499 MEIQEGVNNS NEDFREENLK TANCTLANTN YVNITKMLTD V BACU002720/1-591 MEIQEGVNNS NEDFREENLK TANCTLANTN YVNITKMLTD V bmy_19829T0/1-499 MEIQEGVNNS NEDFREENLK TANCTLANTN YVNITKMLTD V ENSP00000433109/1-499 MEIQEGVNNS NEDFREENLK TANCTLANTN YVNITKMLTD V ENSBTAP00000020543/1-499 MEIQEGVNNS NEDFREENLK TANCTLANTN YVNITKMLTD V