KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:52 2014 Check: 00 .. Name: ENSBTAP00000020545/1-1010 Len: 1016 Check: 2162 Weight: 1.00 Name: ENSP00000307041/1-994 Len: 1016 Check: 5189 Weight: 1.00 Name: ENSTTRP00000004666/1-988 Len: 1016 Check: 1646 Weight: 1.00 Name: bmy_11599T0/1-991 Len: 1016 Check: 6196 Weight: 1.00 Name: BACU016044/1-958 Len: 1016 Check: 5657 Weight: 1.00 // 1 50 ENSBTAP00000020545/1-1010 ----MCPFRL LLGTAVSLSD RRPMAASSHA QECGKHLLYV SEEWNEYQNS ENSP00000307041/1-994 -MRRRPPSRG GRGAARARET RRQPRHRS-- ---GRRMA-- ---------- ENSTTRP00000004666/1-988 -MRRRPPSRG GRGAARAGDT RR-PRHCS-- ---GRRMA-- ---------- bmy_11599T0/1-991 MSGSKCKSSG DIDGTAKKFH LLYCTFQGKP IFKKHRLHTE EHCSRTVSLC BACU016044/1-958 ---------- ---------- ---------- ------LL-- ---------- 51 100 ENSBTAP00000020545/1-1010 KRKDAIGCTL NCSCQSFKPG KINHRQCEQC RHGWVAHALS KLRIPAM-YP ENSP00000307041/1-994 ---EAISCTL NCSCQSFKPG KINHRQCDQC KHGWVAHALS KLRIPPM-YP ENSTTRP00000004666/1-988 ---EAIGCTL NCSCQSFKPG KIHHRQCEQC RHGWVAHXXX XXXXXXXSYP bmy_11599T0/1-991 SLLQAIGCTL NCSCQSFKPG KINHRQCEQC RHGWVAHALS KLRIPPV-YP BACU016044/1-958 ---QAIGCTL NCSCQSFKPG KINHRQCEQC RHGWVAHALS KLRIPPV-YP 101 150 ENSBTAP00000020545/1-1010 TSQVEIVQSN VVFDISSLML YGTQAIPVRL KILLDRLFSV LKQDEVLQIL ENSP00000307041/1-994 TSQVEIVQSN VVFDISSLML YGTQAIPVRL KILLDRLFSV LKQDEVLQIL ENSTTRP00000004666/1-988 TSQVEIVQSN VVFDISSLML YGTQAIPVRL KILLDRLFSV LKQDEVLQIL bmy_11599T0/1-991 TSQVEIVQSN VVFDISSLML YGTQAIPVRL KILLDRLFSV LKQDEVLQIL BACU016044/1-958 TSQVEIVQSN VVFDISSLML YGTQAIPVRL KILLDRLFSV LKQDEVLQIL 151 200 ENSBTAP00000020545/1-1010 HALDWTLQDY IRGYVLQDAS GKVLDHWSIM TSEEEVATLQ QFLRFGETKS ENSP00000307041/1-994 HALDWTLQDY IRGYVLQDAS GKVLDHWSIM TSEEEVATLQ QFLRFGETKS ENSTTRP00000004666/1-988 HALDWTLQDY IRGYVLQDAS GKVLDHWSIM TSEEELATLQ QFLRFGETKS bmy_11599T0/1-991 RALDWTLQDY IRGYVLQDAS GKVLDHWSIM TSEEEVATLQ QFLRFGETKS BACU016044/1-958 RALDWTLQDY IRGYVLQDAS GKVLDHWSIM TSEEEVATLQ QFLRFGETKS 201 250 ENSBTAP00000020545/1-1010 IVELMAIQEK EEQSVVIPPS TANVDIRAFI ESCSHRSASL PTPVDKGNPS ENSP00000307041/1-994 IVELMAIQEK EEQSIIIPPS TANVDIRAFI ESCSHRSSSL PTPVDKGNPS ENSTTRP00000004666/1-988 IVELMVIQEK EEQSIIIPPS TANVDIRAFI ESCSHRSGSL PPPVDKGNPG bmy_11599T0/1-991 IVELMAIQEK EEQSIIIPPS TANVDIRAFI ESCSHRSGSL PPSVDKGNPG BACU016044/1-958 IVELMAIQEK EEQSIIIPPS TANADIRAFI ESCSHQSGSL PPSVDKGNPG 251 300 ENSBTAP00000020545/1-1010 SVHPFENLIN NMTFMLPFQF FNPLPPALIG SLPDPYVLEQ SQDQSQDPKQ ENSP00000307041/1-994 SIHPFENLIS NMTFMLPFQF FNPLPPALIG SLPEQYMLEQ GHDQSQDPKQ ENSTTRP00000004666/1-988 SIHPFENLIN NMTFMLPFQF FNPVPPALIG SVPEPYVLEQ GQDQSQDPKQ bmy_11599T0/1-991 SIHPFENLIN NMTFMLPFQF FNPVPPALIG SVPEPYVLEQ GQDQSQDPKQ BACU016044/1-958 SIHPFENLIN NMTFMLPFQF FNPVPPALIG SVPEPYVLEQ GQDQSQDPKQ 301 350 ENSBTAP00000020545/1-1010 EVHGAFPDSS FLTSSSTPFQ VEKDPCLNCP NAVTKKEDST HFSDSSSYSI ENSP00000307041/1-994 EVHGPFPDSS FLTSSSTPFQ VEKDQCLNCP DAITKKEDST HLSDSSSYNI ENSTTRP00000004666/1-988 EIHGPFPNSS FLTSSSTPFQ VEKEQCLNCP GPVTTKEDSA HLSDSSSYNI bmy_11599T0/1-991 EIHGPFPNSS FLTSSSTPFQ VEKEQCLNCP GPVTKKEDSA HLSDSSSYNI BACU016044/1-958 EIHGPFPNSS FLTSSSTPFQ VEKEQCLNCP GPVTKKEDSA HLSDSSSYNI 351 400 ENSBTAP00000020545/1-1010 VTKLERTQLS PEAKVKPERN SLGAKKGRVF CTACEKTFYD KGTLKIHYNA ENSP00000307041/1-994 VTKFERTQLS PEAKVKPERN SLGTKKGRVF CTACEKTFYD KGTLKIHYNA ENSTTRP00000004666/1-988 ITKLERTQLS PEGKVKSERN SLGTKKGRVF CTACEKTFYD KGTLKIHYNA bmy_11599T0/1-991 ITKLERTQLS PEGKVKSERN SLGTKKGRVF CTACEKTFYD KGTLKIHYNA BACU016044/1-958 ITKLERTQLS PEGKVKSERN SLGTKKGRVF CTACEKTFYD KGTLKIHYNA 401 450 ENSBTAP00000020545/1-1010 VHLKIKHKCT IEGCNMVFSS LRSRNRHSAN PNPRLHMPMN RNNRDKDLRS ENSP00000307041/1-994 VHLKIKHKCT IEGCNMVFSS LRSRNRHSAN PNPRLHMPMN RNNRDKDLRN ENSTTRP00000004666/1-988 VHLKIKHKCT IEGCNMVFSS LRSRNRHSAN PNPRLHMPMN RNNRDKDLRN bmy_11599T0/1-991 VHLKIKHKCT IEGCNMVFSS LRSRNRHSAN PNPRLHMPMN RNNRDKDLRN BACU016044/1-958 VHLKIKHKCT IEGCNMVFSS LRSRNRHSAN PNPRLHMPMN RNNRDKDLRN 451 500 ENSBTAP00000020545/1-1010 GLTLAASESA KRPGLGVTPP DCRPLPGYAG AVEDSRSQPT FPSLSHNGVL ENSP00000307041/1-994 SLNLASSENY KCPGFTVTSP DCRPPPSYPG SGEDSKGQPA FPNIGQNGVL ENSTTRP00000004666/1-988 SLNLAASESY KRPGFRVTSP DCRPFPGYAG SGEDSRSQPA FPSIGQNGVL bmy_11599T0/1-991 SLNLATSESY KRPGFRVTSP DCRPLPGYTG SGEDSRSQPA FPSIGQNGVL BACU016044/1-958 SLNLAASESY KRPGFRVTSP DCRPLPGYTG SGEDSRSQPA FPSIGQNGVL 501 550 ENSBTAP00000020545/1-1010 FPNLKTVQPV LPFYRSPATP AELANTPGML PSLPLLSSSI PEQLASNEMP ENSP00000307041/1-994 FPNLKTVQPV LPFYRSPATP AEVANTPGIL PSLPLLSSSI PEQLISNEMP ENSTTRP00000004666/1-988 FPNLKTVQPV LPFYRSPATP AELANTPGML PSLPLLSSSI PEQLVSNEMP bmy_11599T0/1-991 FPNLKTVQPV LPFYRSPATP AELANTPGML PSLPLLSSSI PEQLVSNEMP BACU016044/1-958 FPNLKTVQPV LPFYRSPATP AELANTPGML PSLPLLSSSI PEQLVSNEMP 551 600 ENSBTAP00000020545/1-1010 FDTLPKKKSR KSSMPIKIEK ETMETADEKR QPLSSDEDMP LQVVSEDDLE ENSP00000307041/1-994 FDALPKKKSR KSSMPIKIEK EAVEIANEKR HNLSSDEDMP LQVVSEDEQE ENSTTRP00000004666/1-988 FDALPKKKSR KSSMPIKIEK EAVEIADEKR HTLSSDEDMP LQVVSEDELE bmy_11599T0/1-991 FDALPKKKSR KSSMPIKIEK EAVEIADEKR HTLSSDEDMP LRVVSEDELE BACU016044/1-958 FDALPKKKSR KSSMPIKIEK EAVEIADEKR HTLSSDEDMP LQVVSEDELE 601 650 ENSBTAP00000020545/1-1010 TCSPRSDGAP EELHTPAGSS ERPRLEEESP CYLGPGVESS GAIRQTPEQA ENSP00000307041/1-994 ACSPQSHRVS EEQHVQSGGL GKPFPEGERP CHRESVIESS GAISQTPEQA ENSTTRP00000004666/1-988 TCSPRSDRAP ------LGSL GKPGPEGERP CHLKPAIESS GALRQTPEQA bmy_11599T0/1-991 GCSPRSDRAP ------LGSL GKPGPEGERP CHLKPAIESS GAIRQTPEQA BACU016044/1-958 GCSPRSDRAP ------LGSL GKSGPEGERP CHLKLAIESS GAIRQTPEQA 651 700 ENSBTAP00000020545/1-1010 MHNSERETGQ KSVLNTVPRD AEEDGREPHL TTRVEPCVPF PDYIKLQQHL ENSP00000307041/1-994 THNSERETEQ TPALIMVPRE VEDGGHEHYF TPGMEPQVPF SDYMELQQRL ENSTTRP00000004666/1-988 TYNSERETEQ KSVLTVVPRD GEDGGREPHL TPGVEPCVPF PDYVKLQQRL bmy_11599T0/1-991 TYNSERETEQ KSVLTVVPRD GEDGGREPHL TPGLEPCVPF PDYVKLQQRL BACU016044/1-958 TYNSERETEQ KSVLTVVPRD GEDGGREPHL TPGLEPCVPF PDYVKLQQRL 701 750 ENSBTAP00000020545/1-1010 LAGGLFGALS TQGMAFPCFE DSKEPEHLGQ PASVRSKEEN RFQCDICKKT ENSP00000307041/1-994 LAGGLFSALS NRGMAFPCLE DSKELEHVGQ HALARQIEEN RFQCDICKKT ENSTTRP00000004666/1-988 LAGGLLSALS SRGMAFPCFE DSKELEHSGQ HTLARPKEEN RFQCDICKKT bmy_11599T0/1-991 LAGGLLSALS SRGMAFPCFE DSRELEHSGQ HALARPKEEN RFQCDICKKT BACU016044/1-958 LAGGLLSALS SRGMAFPCLE DSKELEHSGQ HALARPKEEN RFQCDICKKT 751 800 ENSBTAP00000020545/1-1010 FKNACGVKMH QKNMHSREMH TCTVEGCKAS FPSRRSRDRH SSNLNLHQKV ENSP00000307041/1-994 FKNACSVKIH HKNMHVKEMH TCTVEGCNAT FPSRRSRDRH SSNLNLHQKA ENSTTRP00000004666/1-988 FKNACGVKMH HKNMHAKETH TCTLEGCKAT FPSRRSRDRH SSNLNLHQKV bmy_11599T0/1-991 FKNACSVKMH HKNMHAKETH T--------- ---------H SSNLNLHQKV BACU016044/1-958 FKNACGVKMH HKNMHAKETH TCMMEGCKAT FPSRRSRDRH SSNLNLHQKV 801 850 ENSBTAP00000020545/1-1010 LPQEALESGE DPFRAAYLLK DTAQEAYQEA AFTPQASQTS VIFKGMSRMG ENSP00000307041/1-994 LSQEALESSE DHFRAAYLLK DVAKEAYQDV AFTQQASQTS VIFKGTSRMG ENSTTRP00000004666/1-988 LTQEVLESGE DHFRAAYLLK DMAKEACQGV AFTQQASPTS VIFKGTSRMG bmy_11599T0/1-991 LTQEVLESNE DHFRAAYLLK DMAKEAYQDV AFTQQASPTS VIFKGTSRMG BACU016044/1-958 LTQEVLESNE DHFRAAYLLK DMAKEAYQDV AFTQQASPTS VIFKGTSRMG 851 900 ENSBTAP00000020545/1-1010 SLVYPLAQVR SAGLQSYASG LPSEGTVLDL STTSSVKSES SSHSSWDSDG ENSP00000307041/1-994 SLVYPITQVH SASLESYNSG PLSEGTILDL STTSSMKSES SSHSSWDSDG ENSTTRP00000004666/1-988 SLVYPVAQVH SAGLESYTSG LPSEGTILDL STTSSMKSES SSHSSWDSDG bmy_11599T0/1-991 SLVYPVAQVH SAGLESYTSG PPSEGTILDL STTSSMKSES SSHSSWDSDG BACU016044/1-958 SLVYPVAQVH SAGLESYTSG PPSEGTILDL STTSSMKSES SSHSSWDSDG 901 950 ENSBTAP00000020545/1-1010 ASEEGAVLTE DCDGTCDGPG LVPGED-YPL CVLMGKADQS LASLPSGLPL ENSP00000307041/1-994 VSEEGTVLME DSDGNCEGSS LVPGEDEYPI CVLMEKADQS LASLPSGLPI ENSTTRP00000004666/1-988 ASEEGTVLME DSDGNCEGAS LVPGEDDYPI CVLMEKADQS LASLPSGLPI bmy_11599T0/1-991 ASEEGTVLME DSDGNCEGAS LVPREDDYPI CVLMEKADQS LAGLPSGLPI BACU016044/1-958 ASEEGTVLME DSDGNCEGAS LVPGEDDYPI CVLMEKADQS LASLPSGLPI 951 1000 ENSBTAP00000020545/1-1010 TCHLCQKTYS NKGTFRAHYK TVHLRQLHKC KVPGCNTMFS SVRSRNRHSQ ENSP00000307041/1-994 TCHLCQKTYS NKGTFRAHYK TVHLRQLHKC KVPGCNTMFS SVRSRNRHSQ ENSTTRP00000004666/1-988 TCHLCQKTYS NKGTFRAHYK TVHLRQLHKC KVPGCNTMFS SVRSRNRHSQ bmy_11599T0/1-991 TCHLCQKTYS NKGTFRAHYK TVHLRQLHKC KVPGCNTMFS SVRSRNRHSQ BACU016044/1-958 TCHLCQKTYS NKGTFRAHYK TVHLRQLHKC KIPGCNTMFS SVRSRNRHSQ 1001 1050 ENSBTAP00000020545/1-1010 NPNLHRSLTS SPSHLR ENSP00000307041/1-994 NPNLHKSLAS SPSHLQ ENSTTRP00000004666/1-988 NPNLHKSLAS SPSHLQ bmy_11599T0/1-991 NPNLHKSLAS SPSHLQ BACU016044/1-958 NPNLHKSLAS SPSHLQ