KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:53 2014 Check: 00 .. Name: ENSP00000411169/1-508 Len: 508 Check: 8769 Weight: 1.00 Name: ENSBTAP00000020547/1-508 Len: 508 Check: 7356 Weight: 1.00 Name: ENSTTRP00000012338/1-508 Len: 508 Check: 7354 Weight: 1.00 Name: bmy_07453T0/1-433 Len: 508 Check: 4534 Weight: 1.00 Name: BACU003035/1-508 Len: 508 Check: 8900 Weight: 1.00 // 1 50 ENSP00000411169/1-508 MELDSALEAP SQEDSNLSEE LSHSAFGQAF SKILHCLARP EARRGNVKDA ENSBTAP00000020547/1-508 MEPHGPWESP PWEGSSLPGA WSSSALGQAF SQILHQFAGQ ESRRGKARSA ENSTTRP00000012338/1-508 MEPDGSRESP PREGSSCPGQ WPSSALGQAF SQILHQFAGQ ESRRGKARNA bmy_07453T0/1-433 MEPHGSRESP PREGSSFPGR WPSSALGQAF SQILHQFAGQ ESRRGKARNA BACU003035/1-508 MEPHGSRESP PREGSSFPGR WPSSALGQAF SHILHQFAGQ ESRRGKARNA 51 100 ENSP00000411169/1-508 VLKDLGDLIE ATEFDRLFEG TGARLRGMPE TLGQVAKALE KYAAPSKEEE ENSBTAP00000020547/1-508 ALEDLAALLE AKECDRLFEG SDASLRGMPE MLGQVAKALG KYAAPAEEPE ENSTTRP00000012338/1-508 ALRDLSAVLD AKECDQLFAG SDTSLRGMPE MLGQVAKALG KYAAPPEGPE bmy_07453T0/1-433 ALRDLSALLE AKECDQLFEG SDTSLRGMPE MLGQVAKALG KYAAPPEGPE BACU003035/1-508 ALRDLSALLE AKECDQLFEG SDTSLRGMPE MLGQVAKALE KYAAPPEGPE 101 150 ENSP00000411169/1-508 GGGDGHSEAA EKAAQVGLLF LKLLGKVETA KNSLVGPAWQ TGLHHLAGPV ENSBTAP00000020547/1-508 GRGDRHPDVA EKAAAVALLF LKLLRKVEAA KNSLVCPAWK TSLRPLAGPI ENSTTRP00000012338/1-508 GGGDRHSEVA EKAAAVGLLF LKLLRKVETA KNSLVCPAWK AGLRHLAGPI bmy_07453T0/1-433 GGSDRHSEVA EKAAAVGLLF LKLLRKVETA KNSLVCPAWK AGLRHLAGPI BACU003035/1-508 GGSDRHSEVA EKAAAVGLLF LKLLRKVETA KNSLVCPAWK AGLRHLAGPV 151 200 ENSP00000411169/1-508 YIFAITHSLE QPWTTPRSRE VAREVLTSLL QVTECGSVAG FLHGENEDEK ENSBTAP00000020547/1-508 YVFAVTHSLE QPWTSPRSQE VAGQVLALLL QVTECGSVAG FLHGENEDEK ENSTTRP00000012338/1-508 YIFAITHNLE QPWTSPKSQG VAGQVLALLL QVTECGSVAG FLHGENEDEK bmy_07453T0/1-433 YVFAVTHNLE QPWTSPKSQG VAGQVLALLL QVTECGSVAG FLHGENEDEK BACU003035/1-508 YIFAVTHNLE QPWTSPKSQG VAGQVLALLL QVTECGSVAG FLHGENEDEK 201 250 ENSP00000411169/1-508 GRLSVILGLL KPDLYKESWK NNPAIKHVFS WTLQQVTRPW LSQHLERVLP ENSBTAP00000020547/1-508 GRFTAIMGLL KPDLNKDSWK NNPATKYVFS WTLQKVTRPW LSQHLERTLP ENSTTRP00000012338/1-508 GRFTAVMGLL KPDLNKDSWK SNPATKHVFS WTLQKVTRPW LSQHLERVLP bmy_07453T0/1-433 GRFTAVMGLL KPDLNKDSWK NNPATKHVFS WTLQKVTRPW LSQHLERVLP BACU003035/1-508 GRFTAVMGLL KPDLNKDSWK NNPATKHVFS WTLQKVTRPW LSQHLERVLP 251 300 ENSP00000411169/1-508 ASLVISDDYQ TENKILGVHC LHHIVLNVPA ADLLQYNRAQ VLYHAISNHL ENSBTAP00000020547/1-508 PSLLISDDYQ TENKILGVHC LQHIVLNVPA ADLLQYNRAQ VLYHALFNHL ENSTTRP00000012338/1-508 PSLLISDDYQ TENKILGVHC LHHIVLNVPA ADLLQYNRAQ VLYHALFNHL bmy_07453T0/1-433 PSLLISDDYQ TENKILGVHC LHHIVLNV-- ---------- ---------- BACU003035/1-508 PSLLISDDYQ TENRILGVHC LHHIVLNVPA ADLLQYNRAQ VLYHALFNHL 301 350 ENSP00000411169/1-508 YTPEHHLIQA VLLCLLDLFP ILEKTLHWKG DGARPTTHCD EVLRLILTHM ENSBTAP00000020547/1-508 YAREHHLIQA VLLCLLDLFP ILEKAQHWKG DGARPTTHCD EVLQLILTHM ENSTTRP00000012338/1-508 YTREHHLIQA VLLCLLDLFP ILEKALHWKG DAARPTTHCD EVLQLILTHM bmy_07453T0/1-433 ---------A VLLCLLDLFP ILEKALHWKG DAARPTTHCD EVLQLILMHM BACU003035/1-508 YTREHHLIQA VLLCLLDLFP ILEKALHWKG DAARPSTHCD EVLQLILMHM 351 400 ENSP00000411169/1-508 EPEHRLLLRR TYARNLPAFV NRLGILTVRH LKRLERVIIG YLEVYDGPEE ENSBTAP00000020547/1-508 EPEHRLLLRR TYSRNLPAFV KRLGILTVRH LKRLERVIIG YLEVYDGPEE ENSTTRP00000012338/1-508 EPEHRLLLRR TYARNLPAFV KRLGILTVRH LKRLDRVIIG YLEVYDGPEE bmy_07453T0/1-433 EPEHRLLLRR TYARNLPAFV KRLGILTVRH LKRLER---- ---------- BACU003035/1-508 EPEHRLLLRR TYARSLPAFV KRLGILTVRH MKRLERVIIG YLEVYDGPEE 401 450 ENSP00000411169/1-508 EARLKILETL KLLMQHTWPR VSCRLVVLLK ALLKLICDVA RDPNLTPESV ENSBTAP00000020547/1-508 EARLKILETL KLLLQYTWPR VSCRLVVLLK ALLKLICDVA RDSSLTPECV ENSTTRP00000012338/1-508 EARLKILEAL KLLMQYTWPR VPCRLVVLLK ALLKLICDVA RDSSLTPESV bmy_07453T0/1-433 ---------- ---------- ---------- ALLKLICDVA KDSSLTPESV BACU003035/1-508 EARLKILEAL KLLMRYTWPR VPCRLVVLLK ALLKLICDVA TDSSLTPESV 451 500 ENSP00000411169/1-508 KSALLQEATD CLILLDRCSQ GRVKGLLAKI PQSCEDRKVV NYIRKVQQVS ENSBTAP00000020547/1-508 KSALLEEATD CLILLDRCAS GRVKGLLAKI PRSCEDSQVG NCIRRVQQLS ENSTTRP00000012338/1-508 KSALLEEATD CLILLDRCSE GQVKGLLAKI PQSCEDSKVG NCIRRVQQVS bmy_07453T0/1-433 KSALLEEATD CLILLDRCSQ GXVKGLLAKI PQSCEDSKVG NYIRRVQQVS BACU003035/1-508 KSALLEEATD CLILLDRCSQ GQVKGLLAKI PQSCEDNKVG NCIRRVQQVS 501 550 ENSP00000411169/1-508 EGAPYNGT ENSBTAP00000020547/1-508 EGAPCDTT ENSTTRP00000012338/1-508 EGAPYNAT bmy_07453T0/1-433 EGDPYDTT BACU003035/1-508 EGAPYNAT