KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:55 2014 Check: 00 .. Name: ENSTTRP00000001370/1-184 Len: 436 Check: 8451 Weight: 1.00 Name: BACU002741/1-263 Len: 436 Check: 5668 Weight: 1.00 Name: ENSP00000358888/1-272 Len: 436 Check: 7209 Weight: 1.00 Name: bmy_11906T0/1-318 Len: 436 Check: 476 Weight: 1.00 Name: ENSBTAP00000020561/1-374 Len: 436 Check: 656 Weight: 1.00 // 1 50 ENSTTRP00000001370/1-184 ---------- ---------- ---------- ---------- ---------- BACU002741/1-263 ---------- ---------- ---------- ---------- ---------- ENSP00000358888/1-272 ---------- ---------- ---------- ---------- ---------- bmy_11906T0/1-318 AAAPRRPTQA AWIPGRGRPL ALWYSSLPPP RVTSPEPHRG PRGPRAAPRP ENSBTAP00000020561/1-374 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001370/1-184 ---------- ---------- ---------- ---------- -------LFA BACU002741/1-263 -----MRKFG RGRELPELGD CQLDLSFGEI IQMSLPNP-- --HFEGKLFA ENSP00000358888/1-272 ----MSSTES AGRTADKSPR QQVDRLLVGL RWRRLEEPLG FIKVLQWLFA bmy_11906T0/1-318 HRASMSSTES SSRTADKSPR QQVDRLLVRL RWRRLEEPLG FIKVLQWLFA ENSBTAP00000020561/1-374 ----MSSTES SSRTADKSPR QQVDRLLVGL RWRRLEEPLG FIKVLQWLFA 101 150 ENSTTRP00000001370/1-184 IFAFGSCGSY SGETGATVRC NNEAKDVSTI LVSFGYPFXX XXXXXXXXXX BACU002741/1-263 IFAFGSCGSY SGETGATVRC NNEAKDVSAI IVSFGYPFRL NRVQYEMPLC ENSP00000358888/1-272 IFAFGSCGSY SGETGAMVRC NNEAKDVSSI IVAFGYPFRL HRIQYEMPLC bmy_11906T0/1-318 IFAFGSCGSY SGETGATVRC NNEAKDMSAI IVSFGYPFRL NRVQYEMPLC ENSBTAP00000020561/1-374 IFAFGSCGSY SGETGATVRC NNEAKDVSAI IVSFGYPFRL NRVQYEMPLC 151 200 ENSTTRP00000001370/1-184 XXXXXXXXXX XX-XXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002741/1-263 DDESTSTTMH LMGDFSAPAE FFVTLGIFSF FYTIAALVLY LRFHNIYTEN ENSP00000358888/1-272 DEESSSKTMH LMGDFSAPAE FFVTLGIFSF FYTMAALVIY LRFHNLYTEN bmy_11906T0/1-318 DDESTSTTMH LMGDFSAPAE FFVTLGIFSF FYTIAALVLY LRFHNIYTEN ENSBTAP00000020561/1-374 DDESTSKTMH LMGDFSAPAE FFVTLGIFSF FYTIAALVIY LRFHKLYTEN 201 250 ENSTTRP00000001370/1-184 XXXXXXDFCV TVSFTFFWLV AAAAWGKGLT DVKGATRPSS LTAAMSVCHG BACU002741/1-263 RRFPLVDFCV TVSFTFFWLV AAAAWGKGLT DIKGATRPSS LTAAMSVCHG ENSP00000358888/1-272 KRFPLVDFCV TVSFTFFWLV AAAAWGKGLT DVKGATRPSS LTAAMSVCHG bmy_11906T0/1-318 RRFPLVDFCV TVSFTFFWLV AAAAWGKGLT DIKGATRPSS LTAAMSVCHG ENSBTAP00000020561/1-374 RRFPLVDFCV TVSFTFFWLV AAAAWGKGLT DVKGATRPSS LTAAMSVCHG 251 300 ENSTTRP00000001370/1-184 EEAVCSAGAT PSMGLANISV L-GFISFFLW AGN------- ---------- BACU002741/1-263 EEAVCSAGAS PSMGLANISV LFGFINFFLW AGNCWFVFKE TPWHGQG--- ENSP00000358888/1-272 EEAVCSAGAT PSMGLANISV LFGFINFFLW AGNCWFVFKE TPWHGQGQGQ bmy_11906T0/1-318 EEAVCSAGAT PSMGLANISV LFGFINFFLW AGNCWFVFKE TPWHGQG--- ENSBTAP00000020561/1-374 EEAVCSAGAT PSMGLANISV LFGFINFFLW AGNCWFVFKE TPWHGQG--- 301 350 ENSTTRP00000001370/1-184 ---------- ---------- ---------- ---------- ---------- BACU002741/1-263 -QDQGQDQGQ GAGQESAAEQ GAVEKQ---- ---------- ---------- ENSP00000358888/1-272 DQDQDQDQGQ GPSQESAAEQ GAVEKQ---- ---------- ---------- bmy_11906T0/1-318 -----QDQGQ GAGQESAAEQ GAVEKQ---- ---------- ---------- ENSBTAP00000020561/1-374 -----QDQGQ GTSPESAAEQ GAVEKHYSRT EQHRTAPLQP PPASRTSLFL 351 400 ENSTTRP00000001370/1-184 ---------- ---------- ---------- ---------- ---------- BACU002741/1-263 ---------- ---------- ---------- ---------- ---------- ENSP00000358888/1-272 ---------- ---------- ---------- ---------- ---------- bmy_11906T0/1-318 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020561/1-374 LLQLPSPIIL GFETSSLMGR HQLLETWAAL PVPSYPSSSW SPRWQELSAS 401 450 ENSTTRP00000001370/1-184 ---------- ---------- ---------- ------ BACU002741/1-263 ---------- ---------- ---------- ------ ENSP00000358888/1-272 ---------- ---------- ---------- ------ bmy_11906T0/1-318 ---------- ---------- ---------- ------ ENSBTAP00000020561/1-374 CLLPGPRHLP WGLTCTLTAS ENQPLLQFSH PSLLGH