KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:55 2014 Check: 00 .. Name: ENSP00000274192/1-259 Len: 261 Check: 8715 Weight: 1.00 Name: ENSBTAP00000020570/1-257 Len: 261 Check: 501 Weight: 1.00 Name: ENSTTRP00000012027/1-256 Len: 261 Check: 7750 Weight: 1.00 Name: BACU019989/1-236 Len: 261 Check: 9166 Weight: 1.00 Name: bmy_21294T0/1-148 Len: 261 Check: 9875 Weight: 1.00 // 1 50 ENSP00000274192/1-259 MATATGVAEE RLLAALAYLQ CAVGCAVFAR NRQTNSVYGR HALPSHRLRV ENSBTAP00000020570/1-257 ----MELAER FLLDALAYLE CALGVVCYVL LKLVGSPYGR YASSGSAFGL ENSTTRP00000012027/1-256 ---TMELAER FLLDALAYLE CALGFLCYVL LKLVGSPYGR YASPRSAFRL BACU019989/1-236 ---TMELAER FLLDALAYLE CALGFLCYVL LKLVGSPYGR YASPRSAFRL bmy_21294T0/1-148 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000274192/1-259 PARAAWVVQE LPSLALPLYQ Y--ASESAPR LRSAPNCILL AMFLVHYGHR ENSBTAP00000020570/1-257 PARAAWTVQE LPSLALPLLA CAGAGAPAER LNRWPNCILL AMFLVHYAQR ENSTTRP00000012027/1-256 PARAAWAVQE LPSLAVPLLA C--ACAPAER LNRWPNCILL TMFLVHYAQR BACU019989/1-236 PARAAWAVQE LPSLAVPLLA C--AGAPAER LNHWPNCILL TMFLVHYAQR bmy_21294T0/1-148 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000274192/1-259 CLIYPFLMRG GKPMPLLACT MAIMFCTCNG YLQSRYLSHC AVYADDWVTD ENSBTAP00000020570/1-257 SLVFPFLIRG GKPMPLYAFL LAFIFCTYNG YLQSRYLSQY AVYADDWLSD ENSTTRP00000012027/1-256 ALIFPFLIRG GKPMPLYTFI LAFMFCTYNG YLQSRYLSQY AVYADNWLTD BACU019989/1-236 ALIFPFLIRG GKPMPLYTFM LAFMFCTYNG YLQSRYLSQY AVYADSWLTD bmy_21294T0/1-148 ---------- ---MPLYTFM LAFMFCTYNG YLQSRYLSQY AVYADNWLAD 151 200 ENSP00000274192/1-259 PRFLIGFGLW LTGMLINIHS DHILRNLRKP GDTGYKIPRG GLFEYVTAAN ENSBTAP00000020570/1-257 PRFLTGSALW LIGMLINIHS DHVLRNLRKP GETGYKIPRG GLFEYISAAN ENSTTRP00000012027/1-256 PRFLTGFVLW LLGLLINIHS DHVLRNLRKP GETGYKIPRG GLFEYITAAN BACU019989/1-236 PRFLTGFVLW LLGMLINIHS DHVLRNLRKP GETGYKIPKG GLFEYITAAN bmy_21294T0/1-148 PRFLTGFVLW LLGMLINIHS DHVLRNLRKP GETGYKIPKG GLFEYITAAN 201 250 ENSP00000274192/1-259 YFGEIMEWCG YALASWSVQG AAFAFFTFCF LSGRAKEHHE WYLRKFEEYP ENSBTAP00000020570/1-257 YFGEVVEWCG YALASWSIQG WAFAVFTFCV LFTRAQQHHK WYHEKFEDYP ENSTTRP00000012027/1-256 YFGEVVEWCG FALASWSIQG WAFAVFTFCV LLTRAQQHHQ WYHEKFEDYP BACU019989/1-236 YFGEVVEWCG YALASWSIQG WAFAVFTFCV LLTRAQQHHQ Y--------- bmy_21294T0/1-148 YFGEVVEWCG YALASWSIQG WAFAVFTFCV LLTRAQQHHQ WYHEKFEDYP 251 300 ENSP00000274192/1-259 KFRKIIIPFL F ENSBTAP00000020570/1-257 KFRKIMIPFL V ENSTTRP00000012027/1-256 KFRKIMIPFL F BACU019989/1-236 ---------- - bmy_21294T0/1-148 KFRKIMIPFL F