KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:57 2014 Check: 00 .. Name: ENSP00000304903/1-341 Len: 342 Check: 5997 Weight: 1.00 Name: ENSBTAP00000020579/1-341 Len: 342 Check: 6319 Weight: 1.00 Name: bmy_00760T0/1-340 Len: 342 Check: 8688 Weight: 1.00 Name: BACU011925/1-340 Len: 342 Check: 9794 Weight: 1.00 Name: ENSTTRP00000016368/1-269 Len: 342 Check: 8818 Weight: 1.00 // 1 50 ENSP00000304903/1-341 MPKRKVTFQG VGDEEDEDEI IVPKKKLVDP VAGSGGPGSR FKGKHSLDSD ENSBTAP00000020579/1-341 MPKRKVTFQG VGD-DDEDEI SVPKKKLVDP VAGVGGPGSR FKGKHSLDSD bmy_00760T0/1-340 MPKRKVTFQG VGDEDDEDEI SVPKKKLVDP VAGAGGPGSR FKGKHSLDSD BACU011925/1-340 MPKRKVTFQG VGDEDDEDEI SVPKKKLVDP VAGAGGPGSR FKGKHSLDSD ENSTTRP00000016368/1-269 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000304903/1-341 EEEDDDDGGS SKYDILASED VEGQEAATLP SEGGVRITPF NLQEEMEEGH ENSBTAP00000020579/1-341 EEEEEEEEGS SKYDILASED VEGQEAATLP SEGGVRITPF NLQEEMEEGH bmy_00760T0/1-340 EE--DDDEGS SKYDILASED VEGQEAATLP SEGGVRITPF NLQEEMEEGH BACU011925/1-340 EE--DDDEGS SKYDILASED VEGQEAATLP SEGGVRITPF NLQEEMEEGH ENSTTRP00000016368/1-269 ---------- ---------- ---QEAATLP SEGGVRITPF NLQEEMEEGH 101 150 ENSP00000304903/1-341 FDADGNYFLN RDAQIRDSWL DNIDWVKIRE RPPGQRQASD SEEEDSLGQT ENSBTAP00000020579/1-341 FDADGNYFLN RDAQIRDSWL DNIDWVKIRE RPPDQRPPSD SEEEDSLGQT bmy_00760T0/1-340 FDADGNYFLN REAQIRDSWL DNIDWVKIRE RPPNQRPPSD SEEEDSLGQT BACU011925/1-340 FDADGNYFLN REAQIRDSWL DNIDWVKIRE RPPNQRPPSD SEEEDSLGQT ENSTTRP00000016368/1-269 FDADGNYFLN REAQIRDSWL DNIDWVKIRE RPPNQRPPSD SEEEDSLGQT 151 200 ENSP00000304903/1-341 SMSAQALLEG LLELLLPRET VAGALRRLGA RGGGK-GRKG PGQPSSPQRL ENSBTAP00000020579/1-341 PMSTQALLEG LLELMLPRET VAGALRRLGA RGGGKEGSKG PGRPSSPQRL bmy_00760T0/1-340 PMSAQALLEG LLELMLPRET VAGALRRLGA RGGGKGGSKG PARPSSPQRL BACU011925/1-340 PMSAQALLEG LLELMLPRET VAGALRRLGA RGGGKGGSKG PARPSSPQRL ENSTTRP00000016368/1-269 PMSAQALLEG LLELMLPRET VAGALRRLGA RGGGKGGSKG PGRPSSPQRL 201 250 ENSP00000304903/1-341 DRLSGLADQM VARGNLGVYQ ETRERLAMRL KGLGCQTLGP HNPTPPPSLD ENSBTAP00000020579/1-341 DRLSGLADQM VAQGNLGVYQ ETRERLAMRL KGLACQTQGP RDPTPPPSLD bmy_00760T0/1-340 DRLSGLADQM VARGNLGVYQ ETRERLAMRL KGLGCQTQGP RDPTAPPSLD BACU011925/1-340 DRLSGLADQM VARGNLGVYQ ETRERLAMRL KGLGCQTQGP RDPTAPPSLD ENSTTRP00000016368/1-269 DRLSGLADQM VARGNLGVYQ ETRERLAMRL KGLGCQTQGP RDPTAPPSLD 251 300 ENSP00000304903/1-341 MFAEELAEEE LETPTPTQRG EAESRGDGLV DVMWEYKWEN TGDAELYGPF ENSBTAP00000020579/1-341 MFAEEVAEGE LQTPTPAQRE EVESPGDGLA DVMWEYKWEN TGDAELYGPF bmy_00760T0/1-340 MFAEEVAEGE LETPTPAQRG EAELPGDGLA DVMWEYKWEN TGDAELYGPF BACU011925/1-340 MFAEEVAEGE LETPTPAQRG ETESPGDGLA DVMWEYKWEN TGDAELYGPF ENSTTRP00000016368/1-269 MFAEEVAEGE LETPTPAQRG DAESPGDGLA DVMWEYKWEN TGDAELYGPF 301 350 ENSP00000304903/1-341 TSAQMQTWVS EGYFPDGVYC RKLDPPGGQF YNSKRIDFDL YT ENSBTAP00000020579/1-341 TSTQMQTWVN EGYFPDGVYC RKLDPPGGQF YNSKRIDFDL YT bmy_00760T0/1-340 SSTQMQTWVN EGYFPDGVYC RKLDAPGGQF YNSKRIDFDL YT BACU011925/1-340 SSTQMQTWVN EGYFPDGVYC RKLDAPGGQF YNSKRIDFDL YT ENSTTRP00000016368/1-269 SSTQMQTWVN EGYFPDGVYC RKMDTPGGQF YNSKRIDFDL YT