KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:57 2014 Check: 00 .. Name: ENSBTAP00000020580/1-312 Len: 468 Check: 899 Weight: 1.00 Name: ENSP00000305193/1-392 Len: 468 Check: 460 Weight: 1.00 Name: bmy_15722T0/1-279 Len: 468 Check: 5914 Weight: 1.00 Name: BACU010248/1-422 Len: 468 Check: 8104 Weight: 1.00 Name: ENSTTRP00000010950/1-396 Len: 468 Check: 4259 Weight: 1.00 // 1 50 ENSBTAP00000020580/1-312 ---------- ---------- ---------- ---------K TFSLLLTSGR ENSP00000305193/1-392 ---------- ---------- ---------- ---------M QSPAVLVTSR bmy_15722T0/1-279 RLRLRPSAVA TRRRARARDA ATPAPASLVT ARPARSFAVM QSPAVLVTSR BACU010248/1-422 ---------- ---------- ---------- ---------M GTQV----RR ENSTTRP00000010950/1-396 ---------- ---------- ---------- ---------M QSPAVLVTSR 51 100 ENSBTAP00000020580/1-312 RVQNVHTGLD LSVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED ENSP00000305193/1-392 RLQNAHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED bmy_15722T0/1-279 RVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED BACU010248/1-422 QVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED ENSTTRP00000010950/1-396 RVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED 101 150 ENSBTAP00000020580/1-312 VVQFLVSKKY SDIEEFYQKL CSRYPTASLP PLPRKVLFVG EGDIRERRAL ENSP00000305193/1-392 VVQFLVSKKY SEIEEFYQKL SSRYAAASLP PLPRKVLFVG ESDIRERRAV bmy_15722T0/1-279 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM BACU010248/1-422 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM ENSTTRP00000010950/1-396 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM 151 200 ENSBTAP00000020580/1-312 FDEILRCISK DAELAGSPEL LEFLGTRSPG ATDLSGRDVS VLD-TDSQAG ENSP00000305193/1-392 FNEILRCVSK DAELAGSPEL LEFLGTRSPG AAGLTSRDSS VLDGTDSQTG bmy_15722T0/1-279 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQAG BACU010248/1-422 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQAG ENSTTRP00000010950/1-396 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQGG 201 250 ENSBTAP00000020580/1-312 C------LPS RVPKLKGDVR P--------- ---------- ---GPALT-- ENSP00000305193/1-392 NDEEAFDFFE EQDQVAEEGP P---VQSLKG EDAEESLE-- --EEEALD-- bmy_15722T0/1-279 DDGDAFDFFQ QQDRVEGEGL P---TLGQKG QDAGKSSEEE EEEEEALD-- BACU010248/1-422 DDGDAFDFFQ QQDRVEGTRS PGAADLSSRD FSVLDTDSQA GDDGDAFDFF ENSTTRP00000010950/1-396 DDGDAFDFFQ QQDRVEGEGL P---TLDQKG QDAGKSSE-- DEAEEALD-- 251 300 ENSBTAP00000020580/1-312 ---------- ---------P GCGWP----- ---------- DKALRLLPLP ENSP00000305193/1-392 ---------- ---------P L-GIM----- RSKKPKKHP- KVAVKAKPSP bmy_15722T0/1-279 ---------- ---------P L-GIM----- ---------- ---------- BACU010248/1-422 QQQDRVEGAW YSGNWLSARP NITWVFGAQP SSKKPKKRP- EVAVKPKPLP ENSTTRP00000010950/1-396 ---------- ---------P L-GIM----- RSKKPKKRPE EVAVKPKPSP 301 350 ENSBTAP00000020580/1-312 ----FLGQAW PDHGLLGP-- ---------- -LAIGPVSTI EASSRVGPMS ENSP00000305193/1-392 RLTIFDEEVD PDEGLFGPGR KLSPQDPSED VSSVDPLKLF DDPDLGGAIP bmy_15722T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU010248/1-422 RLSIFDEEVD PDEGLFGPGR KPSPRSPAED APPRDSLKLF DDPDLGGAVP ENSTTRP00000010950/1-396 CLSIFDEEVD PDEGLFGPGR KPSPRSPAED APPRDSLKLF DDPDLGGAVP 351 400 ENSBTAP00000020580/1-312 SGSTCSPVAP PFHGRP---- --GLAALGLL LKAPSVCRWI CLSGLP-PSL ENSP00000305193/1-392 LGDSLLLPAA CESGGPTPSL SHRDASKELF RVEEDLDQIL NLGAEPKP-- bmy_15722T0/1-279 ------RYVS PSGWGP---- --RLAFSKLL ---------- ---------- BACU010248/1-422 LGDPLLLPAA PESGGPTSRP GCREASKELS RVEEDLDQIL NLGAESKPQL ENSTTRP00000010950/1-396 LGDPLLLPAA HGGGGPTSRP GCREASEELF RVEEDLDQIL NLGAESKPQL 401 450 ENSBTAP00000020580/1-312 EPGLAGLPSA RGSPLPRSRS HGPCRTSQC- ---------- ---------- ENSP00000305193/1-392 KPQLKPKPPV AAKPVIPRKP AVPPKAGPAE AVAGQQKPQE QIQAMDEMDI bmy_15722T0/1-279 ---------- ---------- --PPSWESEK TANQ------ ---------- BACU010248/1-422 QPQPKPKPPV AAKPALLRKP AVPPRAGSSE ALARQQK-QQ QIQAMDETDI ENSTTRP00000010950/1-396 QPQPQPKPPV AAKPALLRKP AVPPRAGSSE AVARQQKQQQ QIQAMDETDI 451 500 ENSBTAP00000020580/1-312 LRLLPEAHAP A------- ENSP00000305193/1-392 LQYIQDHDTP AQAAPSLF bmy_15722T0/1-279 ---------- -------- BACU010248/1-422 LQYIRDHDAP GQAAPSLF ENSTTRP00000010950/1-396 LQYIRDHDAP GQAAPSLF