KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:11:57 2014 Check: 00 ..
Name: ENSBTAP00000020580/1-312 Len: 468 Check: 899 Weight: 1.00
Name: ENSP00000305193/1-392 Len: 468 Check: 460 Weight: 1.00
Name: bmy_15722T0/1-279 Len: 468 Check: 5914 Weight: 1.00
Name: BACU010248/1-422 Len: 468 Check: 8104 Weight: 1.00
Name: ENSTTRP00000010950/1-396 Len: 468 Check: 4259 Weight: 1.00
//
1 50
ENSBTAP00000020580/1-312 ---------- ---------- ---------- ---------K TFSLLLTSGR
ENSP00000305193/1-392 ---------- ---------- ---------- ---------M QSPAVLVTSR
bmy_15722T0/1-279 RLRLRPSAVA TRRRARARDA ATPAPASLVT ARPARSFAVM QSPAVLVTSR
BACU010248/1-422 ---------- ---------- ---------- ---------M GTQV----RR
ENSTTRP00000010950/1-396 ---------- ---------- ---------- ---------M QSPAVLVTSR
51 100
ENSBTAP00000020580/1-312 RVQNVHTGLD LSVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED
ENSP00000305193/1-392 RLQNAHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED
bmy_15722T0/1-279 RVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED
BACU010248/1-422 QVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED
ENSTTRP00000010950/1-396 RVQNVHTGLD LTVPQHQEVR GKMMSGHVEY QILVVTRLAA FKSAKHRPED
101 150
ENSBTAP00000020580/1-312 VVQFLVSKKY SDIEEFYQKL CSRYPTASLP PLPRKVLFVG EGDIRERRAL
ENSP00000305193/1-392 VVQFLVSKKY SEIEEFYQKL SSRYAAASLP PLPRKVLFVG ESDIRERRAV
bmy_15722T0/1-279 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM
BACU010248/1-422 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM
ENSTTRP00000010950/1-396 VVQFLVSRKY SDIEEFYQKL SSRYPAASLP PLPRKVLFVG ECDIRERRAM
151 200
ENSBTAP00000020580/1-312 FDEILRCISK DAELAGSPEL LEFLGTRSPG ATDLSGRDVS VLD-TDSQAG
ENSP00000305193/1-392 FNEILRCVSK DAELAGSPEL LEFLGTRSPG AAGLTSRDSS VLDGTDSQTG
bmy_15722T0/1-279 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQAG
BACU010248/1-422 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQAG
ENSTTRP00000010950/1-396 FDEILRCVSK DAELAGSPEL LEFLGTRSPG AADLSSRDFS VLD-TDSQGG
201 250
ENSBTAP00000020580/1-312 C------LPS RVPKLKGDVR P--------- ---------- ---GPALT--
ENSP00000305193/1-392 NDEEAFDFFE EQDQVAEEGP P---VQSLKG EDAEESLE-- --EEEALD--
bmy_15722T0/1-279 DDGDAFDFFQ QQDRVEGEGL P---TLGQKG QDAGKSSEEE EEEEEALD--
BACU010248/1-422 DDGDAFDFFQ QQDRVEGTRS PGAADLSSRD FSVLDTDSQA GDDGDAFDFF
ENSTTRP00000010950/1-396 DDGDAFDFFQ QQDRVEGEGL P---TLDQKG QDAGKSSE-- DEAEEALD--
251 300
ENSBTAP00000020580/1-312 ---------- ---------P GCGWP----- ---------- DKALRLLPLP
ENSP00000305193/1-392 ---------- ---------P L-GIM----- RSKKPKKHP- KVAVKAKPSP
bmy_15722T0/1-279 ---------- ---------P L-GIM----- ---------- ----------
BACU010248/1-422 QQQDRVEGAW YSGNWLSARP NITWVFGAQP SSKKPKKRP- EVAVKPKPLP
ENSTTRP00000010950/1-396 ---------- ---------P L-GIM----- RSKKPKKRPE EVAVKPKPSP
301 350
ENSBTAP00000020580/1-312 ----FLGQAW PDHGLLGP-- ---------- -LAIGPVSTI EASSRVGPMS
ENSP00000305193/1-392 RLTIFDEEVD PDEGLFGPGR KLSPQDPSED VSSVDPLKLF DDPDLGGAIP
bmy_15722T0/1-279 ---------- ---------- ---------- ---------- ----------
BACU010248/1-422 RLSIFDEEVD PDEGLFGPGR KPSPRSPAED APPRDSLKLF DDPDLGGAVP
ENSTTRP00000010950/1-396 CLSIFDEEVD PDEGLFGPGR KPSPRSPAED APPRDSLKLF DDPDLGGAVP
351 400
ENSBTAP00000020580/1-312 SGSTCSPVAP PFHGRP---- --GLAALGLL LKAPSVCRWI CLSGLP-PSL
ENSP00000305193/1-392 LGDSLLLPAA CESGGPTPSL SHRDASKELF RVEEDLDQIL NLGAEPKP--
bmy_15722T0/1-279 ------RYVS PSGWGP---- --RLAFSKLL ---------- ----------
BACU010248/1-422 LGDPLLLPAA PESGGPTSRP GCREASKELS RVEEDLDQIL NLGAESKPQL
ENSTTRP00000010950/1-396 LGDPLLLPAA HGGGGPTSRP GCREASEELF RVEEDLDQIL NLGAESKPQL
401 450
ENSBTAP00000020580/1-312 EPGLAGLPSA RGSPLPRSRS HGPCRTSQC- ---------- ----------
ENSP00000305193/1-392 KPQLKPKPPV AAKPVIPRKP AVPPKAGPAE AVAGQQKPQE QIQAMDEMDI
bmy_15722T0/1-279 ---------- ---------- --PPSWESEK TANQ------ ----------
BACU010248/1-422 QPQPKPKPPV AAKPALLRKP AVPPRAGSSE ALARQQK-QQ QIQAMDETDI
ENSTTRP00000010950/1-396 QPQPQPKPPV AAKPALLRKP AVPPRAGSSE AVARQQKQQQ QIQAMDETDI
451 500
ENSBTAP00000020580/1-312 LRLLPEAHAP A-------
ENSP00000305193/1-392 LQYIQDHDTP AQAAPSLF
bmy_15722T0/1-279 ---------- --------
BACU010248/1-422 LQYIRDHDAP GQAAPSLF
ENSTTRP00000010950/1-396 LQYIRDHDAP GQAAPSLF