KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:01 2014 Check: 00 .. Name: ENSTTRP00000009812/1-375 Len: 538 Check: 9542 Weight: 1.00 Name: BACU005388/1-433 Len: 538 Check: 9357 Weight: 1.00 Name: bmy_20292T0/1-453 Len: 538 Check: 2878 Weight: 1.00 Name: ENSP00000278840/1-444 Len: 538 Check: 1507 Weight: 1.00 Name: ENSBTAP00000020610/1-444 Len: 538 Check: 2748 Weight: 1.00 // 1 50 ENSTTRP00000009812/1-375 ---------- ---------- ---------- ---------- ---------- BACU005388/1-433 MGKGGNQGEG ATEREAPMPT FRWEEIQKHS LRTDQWLVID RKVYNITEWS bmy_20292T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000278840/1-444 MGKGGNQGEG AAEREVSVPT FSWEEIQKHN LRTDRWLVID RKVYNITKWS ENSBTAP00000020610/1-444 MGKGGNQDEG ATELEAPMPT FRWEEIQKHN LRTDKWLVID RKVYNITKWS 51 100 ENSTTRP00000009812/1-375 ---------- ---------D VFLAFHRNLD FVRKFMKPLL IGELAPEEPS BACU005388/1-433 HRHPGGHRVI GHYAGEDATD VFLAFHRNLD FVRKFMKPLL IGELAPEEPS bmy_20292T0/1-453 ---------- ---------- ---------- -----MKPLL IGELAPEEPS ENSP00000278840/1-444 IQHPGGQRVI GHYAGEDATD AFRAFHPDLE FVGKFLKPLL IGELAPEEPS ENSBTAP00000020610/1-444 SRHPGGQRVI GHYAGEDATD AFLAFHRNLD FVRKFMKPLL IGELAPEEPS 101 150 ENSTTRP00000009812/1-375 QDHSKNSQIT EDFRALRKTA EDMNLFKSSH LFFLLYLAHI IVMESIAWFT BACU005388/1-433 QDHSKNSQIT EDFRALRKTA EDMNLFKSNH LFFLLYLAHI IIMESIAWFT bmy_20292T0/1-453 QDHSKNSQIT EDFRALRKTA EDMNLFKSNH LFFLLYLAHI IVMESIAWFT ENSP00000278840/1-444 QDHGKNSKIT EDFRALRKTA EDMNLFKTNH VFFLLLLAHI IALESIAWFT ENSBTAP00000020610/1-444 QDRGKNSQIT EDFRALRKTA EDMNLFKSNQ LFFLLHLAHI IAMESIAWFT 151 200 ENSTTRP00000009812/1-375 IFYFGNGWIP TVITAFVLAT SQAQAGWLQH DYGHLSVYKK STWNHIAHKF BACU005388/1-433 IFYFGNGWIA TVITAFILAT SQAQAGWLQH DYGHLSVYKK STWNHIAHKF bmy_20292T0/1-453 IFYFGNGWIP TVITAFILAT SQAQAGWLQH DYGHLSVYKK STWNHIAHKF ENSP00000278840/1-444 VFYFGNGWIP TLITAFVLAT SQAQAGWLQH DYGHLSVYRK PKWNHLVHKF ENSBTAP00000020610/1-444 LFYFGNGWIP TIITAFVLAT SQAQAGWLQH DYGHLSVYKK SMWNHIVHKF 201 250 ENSTTRP00000009812/1-375 MIGHLKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXY- BACU005388/1-433 MIGHLKGASA NWWNHRHFQH HAKPNIFHKD PDVNMLHVFV LGKWQPIEY- bmy_20292T0/1-453 MIGHLKGASA NWWNHRHFQH HAKPNIFHKD PDVNMLHVFV LGRWQPIEYG ENSP00000278840/1-444 VIGHLKGASA NWWNHRHFQH HAKPNIFHKD PDVNMLHVFV LGEWQPIEY- ENSBTAP00000020610/1-444 VIGHLKGASA NWWNHRHFQH HAKPNIFHKD PDVNMLHVFV LGEWQPIEY- 251 300 ENSTTRP00000009812/1-375 ---------- ---------- ---------- ---------- -----GKKKL BACU005388/1-433 ---------- ---------- ---------- ---------- -----GKKKL bmy_20292T0/1-453 KKKLKYLPYN HQHEYFFLIG PPLLIPLYFQ YQIIMSMIVH RDWVYGKKKL ENSP00000278840/1-444 ---------- ---------- ---------- ---------- -----GKKKL ENSBTAP00000020610/1-444 ---------- ---------- ---------- ---------- -----GKKKL 301 350 ENSTTRP00000009812/1-375 KYLPYNHQHE YFFLIGPPLL IPLYFQYQII MSMIVHRDWV DLAWAISYYA BACU005388/1-433 KYLPYNHQHE YFFLIGPPLL IPLYFQYQII MSMIVHRDWV DLAWAISYYA bmy_20292T0/1-453 KYLPYNHQHE YFFLIGPPLL IPLYFQYQII MSMIVHRDWV DLAWAISYYA ENSP00000278840/1-444 KYLPYNHQHE YFFLIGPPLL IPMYFQYQII MTMIVHKNWV DLAWAVSYYI ENSBTAP00000020610/1-444 KYLPYNHQHE YFFLIGPPLL IPLYFQYQII MTMIVRKYWA DLAWAISYYT 351 400 ENSTTRP00000009812/1-375 RFFITYIPFY GVLGAIIFLN FIRFLESHWF VWVTQMNHIV MEIDQEPYRD BACU005388/1-433 RFFITYIPFY GVLGAIIFLN FI-------- ---------- ---------- bmy_20292T0/1-453 RFFITYIPFY GVLGAIIFLN FIRFLESHWF VWVTQMNHIV MEIDQEPYRD ENSP00000278840/1-444 RFFITYIPFY GILGALLFLN FIRFLESHWF VWVTQMNHIV MEIDQEAYRD ENSBTAP00000020610/1-444 RFFITYIPFY GVLGSILFLN FIRFLESHWF VWVTQMNHIV MEIDREPYRD 401 450 ENSTTRP00000009812/1-375 WFSSQLVATC NVEQSFFNDW FSGHLNFQIE HHLFPTMPRH NLHKVAPLVR BACU005388/1-433 ---------- ---------- ---------- -SLFPTMPRH NLHKVAPLVR bmy_20292T0/1-453 WFSSQLVATC NVEQSFFNDW FSGHLNFQIE HHLFPTMPRH NLHKVAPLVR ENSP00000278840/1-444 WFSSQLTATC NVEQSFFNDW FSGHLNFQIE HHLFPTMPRH NLHKIAPLVK ENSBTAP00000020610/1-444 WFSSQLAATC NVEQSFFNDW FSGHLNFQIE HHLFPTMPRH NLHKIAPLVR 451 500 ENSTTRP00000009812/1-375 SLCAKHGIEY QQKPLLQALQ DIIRSL---- --RQSGQLWL DAYLHK---- BACU005388/1-433 SLCAKHGIEY QQKPLLQALQ DIIRDQLSAR RPTSAGLCWT PLYPFLVTVP bmy_20292T0/1-453 SLCAKHGIEY QQKPLLQALQ DIIRDQLSAQ RPTSAGLCWT PLYPFLVTVP ENSP00000278840/1-444 SLCAKHGIEY QEKPLLRALL DIIRSL---- --KKSGKLWL DAYLHK---- ENSBTAP00000020610/1-444 SLCAKHGIEY QEKPLLRALQ DIIGSL---- --RKSGQLWL DAYLHK---- 501 550 ENSTTRP00000009812/1-375 ---------- ---------- ---------- -------- BACU005388/1-433 SDVGKESQGA EESPGDQMSS GRCARAVAHS VPKPGKSP bmy_20292T0/1-453 SAGGKESQGA EESPGDQMSC GRCARAVAHS VPKPGKST ENSP00000278840/1-444 ---------- ---------- ---------- -------- ENSBTAP00000020610/1-444 ---------- ---------- ---------- --------