KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:05 2014 Check: 00 .. Name: ENSTTRP00000005660/1-226 Len: 288 Check: 6251 Weight: 1.00 Name: bmy_01791T0/1-242 Len: 288 Check: 6331 Weight: 1.00 Name: ENSBTAP00000020625/1-266 Len: 288 Check: 1670 Weight: 1.00 Name: ENSP00000332716/1-274 Len: 288 Check: 1299 Weight: 1.00 Name: BACU014345/1-189 Len: 288 Check: 1623 Weight: 1.00 // 1 50 ENSTTRP00000005660/1-226 --MPEPETGA AHVEQEEARL PASKRRFRLL RHFRKQRAL- RRELQDVTPA bmy_01791T0/1-242 MRCQGRRREP HRWNRKRRGS RPVSGGSASL RHFRKQRALW RREVRDVTPA ENSBTAP00000020625/1-266 ---------- ----QEEAGR PPRARRLCLL HHFRKQRALW RLRVRDVSPA ENSP00000332716/1-274 --MPRAEPRA TLGEQEKAGL PLGAWRLYLL RHFRKQTELR RSGSRDVTGA BACU014345/1-189 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005660/1-226 PA-------A AAAVASEAPG SLQVEEEDPD PLLPQVIRSW PWCSKELKTM bmy_01791T0/1-242 QAAAVASAAA AAAVASEAPG SLQVVEEDPD PLLPQVIRSW PWCSKELKTM ENSBTAP00000020625/1-266 RAAAVAS--A AAAVASEAPG SLQ-GEENHD PLSPQVIRSW PGCSKELKTM ENSP00000332716/1-274 LL-------V AAAVASEAVG SLRVAEGGPN TLLLQVLRSW PWCNKELKTM BACU014345/1-189 ---------- ---------- ---------- ---------- ---------M 101 150 ENSTTRP00000005660/1-226 EERKVKRRSP KSFSAHSTQG VNAKKNAIPV SKSTGFSNPA SQSTSQRPKL bmy_01791T0/1-242 EERKVKRRSP KSFSAHSTQV VNAKKNAIPV SKSTGFSNPA SQSTSQRPKL ENSBTAP00000020625/1-266 EERKVKRRSP KSFSAHSTQV VNTKKNAIPV SKSTGFSNPA SQSTSQRPKL ENSP00000332716/1-274 EERKVKRRSP KSFSAHCTQV VNAKKNAIPV SKSTGFSNPA SQSTSQRPKL BACU014345/1-189 EERKVKRRSP KSFSAHSTQV VNAKKNAIPV SKSTGFSNPA SQSTSQRPKL 151 200 ENSTTRP00000005660/1-226 KRVMKEKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01791T0/1-242 KRVMKEKTKP QGGEGKGAQS SPIQHSFLTD VSDVQEMERG LLSLLNDFHS ENSBTAP00000020625/1-266 KRVTKEKARP PGGEGRGAQA APIQHSFLTD VSDVQEMERG LLSLLNDFHS ENSP00000332716/1-274 KRVMKEKTKP QGGEGKGAQS TPIQHSFLTD VSDVQEMERG LLSLLNDFHS BACU014345/1-189 KRVMKEKTKP QGGEGKGAQS SPIQHSFLTD VSDVQEMERG LLSLLNDFHS 201 250 ENSTTRP00000005660/1-226 XXXXXXXNEC SIEQMEHVRG MQEKLARLNL ELYGEL---- ---------- bmy_01791T0/1-242 GKLQAFG--- -IFVCEFTKC MLEE---LNS SMYPLLN--- ---------- ENSBTAP00000020625/1-266 GKLQAFGNEC SIEQMEHVRG MQEKLARLNL ELYGELEELP EDKRKAASDS ENSP00000332716/1-274 GKLQAFGNEC SIEQMEHVRG MQEKLARLNL ELYGELEELP EDKRKTASDS BACU014345/1-189 GKLQAFGNEC SIEQMEHVRG MQEKLARLNL ELYGELEELP EDKRKAASDA 251 300 ENSTTRP00000005660/1-226 ---------- ---------- ---------- -------- bmy_01791T0/1-242 ---------- ---------- -INSEKFTDY NFW----- ENSBTAP00000020625/1-266 NLERLLSDLE ELNSSIQKLH LADAQDVPNT STS----- ENSP00000332716/1-274 NLDRLLSDLE ELNSSIQKLH LADAQDVPNT SAS----- BACU014345/1-189 NLDRLLSDLE ELNFSILSNF CSLETLELHC PIWQPLAK