KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:08 2014 Check: 00 .. Name: ENSP00000368253/1-470 Len: 471 Check: 5821 Weight: 1.00 Name: ENSBTAP00000020641/1-471 Len: 471 Check: 1175 Weight: 1.00 Name: ENSTTRP00000012591/1-464 Len: 471 Check: 4700 Weight: 1.00 Name: BACU005847/1-453 Len: 471 Check: 9022 Weight: 1.00 Name: bmy_01935T0/1-465 Len: 471 Check: 5121 Weight: 1.00 // 1 50 ENSP00000368253/1-470 MAGENHQWQG SILYNMLMSA KQTRAAPEAP ETRLVDQCWG CSCGDEPGVG ENSBTAP00000020641/1-471 MAGEDHQWQG SILYNMLMSA KQVQATPEPP KARVGAACWG CSCGSEPPVG ENSTTRP00000012591/1-464 MAGEDHQWQG SILYNMLMSA KQTHATPEAP EARPGGACWG CSCGSEPPVG BACU005847/1-453 MAGEDHQWQG SILYNMLMSA KQTHATPEAP EARPGGACWG CSCGSEPPVG bmy_01935T0/1-465 MAGEDQQWQG SILYNMLMSA KQTHATPEAP EARPGGACWG CSCGSEPPVG 51 100 ENSP00000368253/1-470 REGLLGGRNV ALLYRCCFCG KDHPRQGSIL YSMLTSAKQT YAAPKAPEAT ENSBTAP00000020641/1-471 REGLTGAPAT VLLYRCCFCG EDHPRQGSIL YNLLMNAKQA QETPEAPEEG ENSTTRP00000012591/1-464 REGLPGERAV ALLYRCCFCG EDHPRQGSIL YNMLTSAKQT QETAEAPEAR BACU005847/1-453 REGLPGERPV ALLYRCCFCG EDHPRQGSIL YNMLTSAKQT QETPEAPEAR bmy_01935T0/1-465 REGLPGERPV ALLYRCCFCG EDHPRQGSIL YNMLTSAKQT QKTPEAPEAR 101 150 ENSP00000368253/1-470 L-GPCWGCSC GSDPGVGRAG LPGGRPVALL YRCCFCGEDH PRQGSILYSL ENSBTAP00000020641/1-471 LGGACWGCSC GSEPPAGREG LTGVRTTVLL YRCCFCGEDH PRQGSILYSL ENSTTRP00000012591/1-464 LGGACWGCSC GSEPPVGREG LPGGRATVLL YRCCFCGEDH PRQGSILYSL BACU005847/1-453 RGGACWGCSC GSEPPVGREG LPGGRATVLL YRCCFCGEDH PRQGSILYSL bmy_01935T0/1-465 RGGACWGCSC GSEPPVGREG LPGGRATVLL YRCCFCGEDH PRQGSILYSL 151 200 ENSP00000368253/1-470 LTSSKQTHVA PAAPEARPGG AWWDRSYFAQ RPGGKEALPG GRATALLYRC ENSBTAP00000020641/1-471 LTSAKQTHVE PEAPEARPGG AWWDSSYSAR RLGGREELQG GQAGALPCRC ENSTTRP00000012591/1-464 LTSAKQTHVA PEAPEARPGG AWWDRSYCAQ RLGGREELPR GRALALPYRC BACU005847/1-453 LTSAKQTHVA PEAPEARPGG AWWDRSYCAQ RLAGGEELPR GRALALPCRC bmy_01935T0/1-465 LTSAKQTHVA PEAPEARPGG AWWDRSYCAQ RLAGREELPR GRALALPCRC 201 250 ENSP00000368253/1-470 CFCGEDHPQQ GSTLYCVPTS TNQAQAAPEE RPRAPWWDTS SGALRPVALK ENSBTAP00000020641/1-471 CFCGEDHPRL GSLPCHVPPG VKPTDLGREA PPGTPWWDPA RGVRRRVTLK ENSTTRP00000012591/1-464 CFCGEDHPRQ GGILCNVPTS AKQTHVAPEA QPGGPWWDPS CGAQRRVALK BACU005847/1-453 CFCGEDHPPQ GGILCNVPTN AKQTHVAPEA QPGAPWWDPS CGAQRRVALK bmy_01935T0/1-465 CFCGEDHPRQ GGILCNVPMN AKQTHVAPEA QLGAPWWDPS CGAQRRVALK 251 300 ENSP00000368253/1-470 SPQVVCEAAS AGLLKTLRFV KYLPCFQVLP LDQQLVLVRN CWASLLMLEL ENSBTAP00000020641/1-471 SPQVVCEAAS AGLLKTLRFV KYLPCFQVLP LDQQLVLLRS CWAPLLLLEL ENSTTRP00000012591/1-464 SPQVVCEAAS AGLLKTLRFV KYLPCFQVLP LDQQLVLVRS CWAPLLLLEL BACU005847/1-453 SPQVVCEAAS AALLKTLRFV KYLPCFQVLP LDQQLVLVRS CWAPLLMLEL bmy_01935T0/1-465 SPQVVCEAAS AALLKTLRFV KYLPCFQVLP LDQQLVLVRS CWAPLLMLEL 301 350 ENSP00000368253/1-470 AQDRLQFETV EVSEPSMLQK ILTTRRRETG GNEPLPVPTL QHHLAPPAEA ENSBTAP00000020641/1-471 AQDRLNFETV ETSEPSLLQS ILATRRRETA GNEPPPQPPL LPHSVLPLEA ENSTTRP00000012591/1-464 AQDRLNFETV ETSEPSLLQK ILTTRRRETE GDEP------ QPHLVLPPEA BACU005847/1-453 AQDRLNFETV ETSEPSLLQR ILTTRRPETE GDEP------ QPHLVLPPEA bmy_01935T0/1-465 AQDRLNFETV ETSEPSLLQR ILTTRRRETE GDEP------ QPHLVLPPEA 351 400 ENSP00000368253/1-470 RKVPSASQVQ AIKCFLSKCW SLNISTKEYA YLKGTVLFNP DVPGLQCVKY ENSBTAP00000020641/1-471 EYLPSAAEVQ TIKGFLAKCR SLDITTKEYA YLKGTVLFNP DLPGLQCVKY ENSTTRP00000012591/1-464 EHLPLAAEVQ AIKGFLAKCW SLDISTKEYA YLKGTVLFNP DLPGLQCVKY BACU005847/1-453 EHLPLAAEVQ AIKGFLAKCW SLDISTKEYA YLKGTVLFNP DLPALQCVKY bmy_01935T0/1-465 EHLPLAAEVQ AIKGFLAKCW SLDISTKEYA YLKGTVLFNP DLPGLQCVKY 401 450 ENSP00000368253/1-470 IQGLQWGTQQ ILSEHTRMTH QGPHDRFIEL NSTLFLLRFI NANVIAELFF ENSBTAP00000020641/1-471 IQGLQWGTQQ ILSEHVRMTH GVYRARFAEL NSALFLLRFI SANTLAELFF ENSTTRP00000012591/1-464 IQGLQWGTQR ILREHVRVTH RGHQARFAEL NSTLFLLRFI NANVLAELFF BACU005847/1-453 IQGLQWGTQQ ILREHVRVTH RGHQA----- -------XFI NANVLAELFF bmy_01935T0/1-465 IQGLQWGTQR ILREHVRLTH RGHQARFAEL NSTLFLLRFI NANVLAELFF 451 500 ENSP00000368253/1-470 RPIIGTVSMD DMMLEMLCTK I ENSBTAP00000020641/1-471 RPIIGTVSMD DMMLEMLCAK L ENSTTRP00000012591/1-464 RPIIGPVTMD DMMLEMLCAK - BACU005847/1-453 RPIIGPVTMD DMMLEMLCVK L bmy_01935T0/1-465 RPIIGPVTMD DMMLEMLCAK L