KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:09 2014 Check: 00 .. Name: BACU006256/1-531 Len: 539 Check: 8353 Weight: 1.00 Name: ENSP00000430934/1-537 Len: 539 Check: 9443 Weight: 1.00 Name: ENSTTRP00000002141/1-538 Len: 539 Check: 9953 Weight: 1.00 Name: ENSBTAP00000020644/1-533 Len: 539 Check: 1777 Weight: 1.00 Name: bmy_15811T0/1-533 Len: 539 Check: 8275 Weight: 1.00 // 1 50 BACU006256/1-531 MAAQCVTKVE LNISCDNLLD KDVGSKSDPL CVLFLNTSGQ QWYEVERTER ENSP00000430934/1-537 MAAQCVTKVA LNVSCANLLD KDIGSKSDPL CVLFLNTSGQ QWYEVERTER ENSTTRP00000002141/1-538 MAAQCVTKVE LNISCDNLLD KDVGSKSDPL CVLFLNTSGQ QWYEVDRTER ENSBTAP00000020644/1-533 MAAQCVTKVE LNISCDNLLD KDIGSKSDPL CVLFLNTSGQ QWYEVERTER bmy_15811T0/1-533 MAAQCVTKVE LNISCDNLLD KDVGSKSDPL CVLFLNTSGQ QWYEVERTER 51 100 BACU006256/1-531 IKNCLNPKFS KTFIIDYYFE VVQKLKFGIY DIDNKTIELS DDDFLGECEC ENSP00000430934/1-537 IKNCLNPQFS KTFIIDYYFE VVQKLKFGVY DIDNKTIELS DDDFLGECEC ENSTTRP00000002141/1-538 IKNCLNPKFS KTFIIDYYFE VVQKLKFGIY DIDNKTIELS DDDFLGECEC ENSBTAP00000020644/1-533 IKNCLNPKFS KTFIIDYYFE VVQKLKFGIY DIDNKTVELS DDDFLGECEC bmy_15811T0/1-533 IKNCLNPKFS KTFIIDYYFE VVQKLKFGIY DIDNKTIELS DDDFLGECEC 101 150 BACU006256/1-531 TLGQIVSSKK LTRPLVLKNG RPAGKGSITI SAEEIKDNRA VLFEMEARKL ENSP00000430934/1-537 TLGQIVSSKK LTRPLVMKTG RPAGKGSITI SAEEIKDNRV VLFEMEARKL ENSTTRP00000002141/1-538 TLGQIVSSKK LTRPLVLKNG RPAGKGSITI SAEEIKDNRV VLFEMEARKL ENSBTAP00000020644/1-533 TLGQIVSSKK LTRPLVLKNG RPAGKGSITI SAEEIKDNRI VLFEMEARKL bmy_15811T0/1-533 TLGQIVSSKK LTRPLVLKNG RPAGKGSITI SAEEIKDNRA VLFEMEARKL 151 200 BACU006256/1-531 DNKDLFGKSD PYLEFHKQMS DGNWLMVHRT EVIKNNLNPV WRPFKISLNS ENSP00000430934/1-537 DNKDLFGKSD PYLEFHKQTS DGNWLMVHRT EVVKNNLNPV WRPFKISLNS ENSTTRP00000002141/1-538 DNKDLFGKSD PYLEFHKQMS DGNWLMVHRT EVIKNNLNPV WRPFKISLNS ENSBTAP00000020644/1-533 DNKDLFGKSD PYLEFHKQTS DGNWLMVHRT EVVKNNLNPV WRPFKISLNS bmy_15811T0/1-533 DNKDLFGKSD PYLEFHKQMS DGNWLMVHRT EVIKNNLNPV WRPFKISLNS 201 250 BACU006256/1-531 LCYGDMDKTI KVECYDYDND GSHDLIGTFQ TTMTKLKEAS RNSPVEFECI ENSP00000430934/1-537 LCYGDMDKTI KVECYDYDND GSHDLIGTFQ TTMTKLKEAS RSSPVEFECI ENSTTRP00000002141/1-538 LCYGDMDETI KVECYDYDND GSHDLIGTFQ TTMTKLKEAS RNSPVEFECI ENSBTAP00000020644/1-533 LCYGDMDKTI KVECYDYDND GSHDLIGTFQ TTMTKLKEAS RSSPVEFECI bmy_15811T0/1-533 LCYGDMDKTI KVECYDYDND GSHDLIGTFQ TTMTKLKEAS RNSPVEFECI 251 300 BACU006256/1-531 NEKKRQKKKS YKNSGVISVK QCEITVECTF LDYIMGGCQL NFTVGVDFTG ENSP00000430934/1-537 NEKKRQKKKS YKNSGVISVK QCEITVECTF LDYIMGGCQL NFTVGVDFTG ENSTTRP00000002141/1-538 NEKKRQKKKS YKNSGVISVK QCEITVECTF LDYIMGGCQL NFTVGVDFTG ENSBTAP00000020644/1-533 NEKKRQKKKS YKNSGVISVK HCEITVECTF LDYIMGGCQL NFTVGVDFTG bmy_15811T0/1-533 NEKKRQKKKS YKNSGVIIVK QCEITVECTF LDYIMGGCQL NFTVGVDFTG 301 350 BACU006256/1-531 SNGDPRSPDS LHYISPNGVN EYLTAIWSVG LVIQDYDADK MFPAFGFGAQ ENSP00000430934/1-537 SNGDPRSPDS LHYISPNGVN EYLTALWSVG LVIQDYDADK MFPAFGFGAQ ENSTTRP00000002141/1-538 SNGDPRSPDS LHYISPNGVN EYLTAIWSVG LVIQDYDADK MFPAFGFGAQ ENSBTAP00000020644/1-533 SNGDPRSPNS LHYISPNGVN EYLTAIWSVG LVIQDYDADK MFPAFGFGAQ bmy_15811T0/1-533 SNGDPRSPDS LHYIXPNGVN EYLTAIWSVG LVIQDYDADK MFPAFGFGAQ 351 400 BACU006256/1-531 IPPQWQVSHE FPINFNPSNP NCNGIQGIIE AYRTCLPQIK LYGPTNFSPI ENSP00000430934/1-537 IPPQWQVSHE FPMNFNPSNP YCNGIQGIVE AYRSCLPQIK LYGPTNFSPI ENSTTRP00000002141/1-538 IPPQWQVSHE FPINFNPSNP YCNGIQGIIE AYRACLPQIK LYGPTNFSPI ENSBTAP00000020644/1-533 VPPQWQVSHE FPINFNPSNP YCNGVQGIVE AYRACLPQIK LYGPTNFSPI bmy_15811T0/1-533 IPPQWQVSHE FPINFNPSNP NCNGIQGIIE AYRICLPQIK LYGPTNFSPI 401 450 BACU006256/1-531 INHVARFAAA ATQQQTAS-Q YFVLLIITDG VITDLDETRQ AIVNAAKLPM ENSP00000430934/1-537 INHVARFAAA ATQQQTAS-Q YFVLLIITDG VITDLDETRQ AIVNASRLPM ENSTTRP00000002141/1-538 INHVARFAAA ATQQQTASXX XXXXXXXXXS VITDLDETRQ AIVNAAKLPM ENSBTAP00000020644/1-533 INHVARFAAA ATQQRTAS-Q YFVLLIITDG VITDLDETRQ AIVNAAKLPM bmy_15811T0/1-533 INHVARFAAA ATQQQTAS-Q YFVLLIITDG VITDLDETRQ AIVNAAKLPM 451 500 BACU006256/1-531 SIIIVGVGGA DFGAMEFLDG DGGSLRSPSG EVAIRDIVQF VPFRQFQNDW ENSP00000430934/1-537 SIIIVGVGGA DFSAMEFLDG DGGSLRSPLG EVAIRDIVQF VPFRQFQNA- ENSTTRP00000002141/1-538 SIIIVGVGDA DFGAMEFLDG DGGSLRSPSG EIAIRDIVQF VPFRQFQSA- ENSBTAP00000020644/1-533 SIIIVGVGGA DFGAMEFLDG DGGSLRSPTG EEAVRDIVQF VPFRQFQNA- bmy_15811T0/1-533 SIIIVGVGGA DFGAMEFLDG DGGSLRSPSG EVAIRDIVQF VPFRQFQNA- 501 550 BACU006256/1-531 TQECQGLGSS REFSERRLTK ---YEIVFSA MPSIQ---- ENSP00000430934/1-537 PKEALAQCVL AEIPQQVVGY FNTYKLLPPK NPATKQQKQ ENSTTRP00000002141/1-538 PKEALAQCVL AEIPQQVVGY FNTYKLLPPK NPATKKELW ENSBTAP00000020644/1-533 PKEALAQSVL AEVPQQVVGY FNTYKLLPPK NPATK---- bmy_15811T0/1-533 PKEALAQCVL AEIPQQVVGY FNTYKLLPPK NPATK----