KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:12 2014 Check: 00 .. Name: ENSP00000355082/1-1135 Len: 1135 Check: 1844 Weight: 1.00 Name: ENSBTAP00000020655/1-1134 Len: 1135 Check: 8390 Weight: 1.00 Name: BACU004171/1-637 Len: 1135 Check: 3372 Weight: 1.00 Name: ENSTTRP00000002561/1-1128 Len: 1135 Check: 9776 Weight: 1.00 Name: bmy_11178T0/1-835 Len: 1135 Check: 1061 Weight: 1.00 // 1 50 ENSP00000355082/1-1135 MHQMNAKMHF RFVFALLIVS FNHDVLGKNL KYRIYEEQRV GSVIARLSED ENSBTAP00000020655/1-1134 MYQMNAKMHF TFVFALLVVS FNLDVLGKNL KYRIYEEQRV GSVIARLSED BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 MYQMNAKMHF RFVFALLVVS FNSDVLGKNL KYRIYEEQRV GSVIARLSED bmy_11178T0/1-835 ---MNAKMHF RFVFALLVVS FNSEVLGKNL KYRIYEEQRV GSVIARLSED 51 100 ENSP00000355082/1-1135 VADVLLKLPN PSTVRFRAMQ RGNSPLLVVN EDNGEISIGA TIDREQLCQK ENSBTAP00000020655/1-1134 VADVLVKLPN PSTVRFRAMQ RGNTPLLVVN EDNGEISIGA KIDREQLCQK BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 VADVLVKLPN PSTVRFRAMQ RGNSPLLVVN EDSGEISIGA KIDREQLCQK bmy_11178T0/1-835 VADILVKLPN PSTVRFRAMQ RGNSPLLVVN EDSGEISIGA KIDREQLCQK 101 150 ENSP00000355082/1-1135 NLNCSIEFDV ITLPTEHLQL FHIEVEVLDI NDNSPQFSRS LIPIEISESA ENSBTAP00000020655/1-1134 NLNCSIEFDV ITLPTEHLQL FHIEVEVLDI NDNSPQFSRS LIPIEISESA BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 NLNCSIEFDV ITLPTEHLQL FHIEVEVLDI NDNSPQFSRP LIPIEISESA bmy_11178T0/1-835 NLNCSIEFDV ITLPTEHLQL FHIEVEVLDI NDNSPQFSRP LIPIEISESA 151 200 ENSP00000355082/1-1135 AVGTRIPLDS AFDPDVGENS LHTYSLSAND FFNIEVRTRT DGAKYAELIV ENSBTAP00000020655/1-1134 AVGTRIPLDS AFDPDVGENS LHTYSLSAND FFNIEVRTRT DGAKYAELIV BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 AVGTRIPLDS AFDPDVGENS LHTYSLSAND FFNIEVQTRT DGAKYAELIV bmy_11178T0/1-835 AVGTRIPLDS AFDPDVGENS LHTYSLSAND FFNIEVRTRT DGAKYAELIV 201 250 ENSP00000355082/1-1135 VRELDRELKS SYELQLTASD MGVPQRSGSS ILKISISDSN DNSPAFEQQS ENSBTAP00000020655/1-1134 VRELDRELKS SYELQLTASD MGVPQRSGSS ILKISISDSN DNSPAFEQQS BACU004171/1-637 ---------- ---------- MGVPQRSGSS ILKISISDSN DNSPAFEQQS ENSTTRP00000002561/1-1128 VRELDRELKS SYELQLTASD MGVPQRSGSS ILKISISDSN DNSPAFEQQS bmy_11178T0/1-835 VRELDRELKS SYELQLTASD MGVPQRSGSS ILKISISDSN DNSPAFEQQS 251 300 ENSP00000355082/1-1135 YIIQLLENSP VGTLLLDLNA TDPDEGANGK IVYSFSSHVS PKIMETFKID ENSBTAP00000020655/1-1134 YIIQLLENSP VGTLLLDLNA TDPDEGANGK IVYSFSSHVS PKIIETFKID BACU004171/1-637 YIIQLLENSP IGTLLLDLNA TDPDEGANGK IVYSFSSHVS PKIIETFKID ENSTTRP00000002561/1-1128 YIIQLLENSP IGTLLLDLNA TDPDEGANGK IVYSFSSHVS PKIIETFKID bmy_11178T0/1-835 YIIQLLENSP IGTLLLDLNA TDPDEGANGK IVYSFSSHVS PKIIETFKID 301 350 ENSP00000355082/1-1135 SERGHLTLFK QVDYEITKSY EIDVQAQDLG PNSIPAHCKI IIKVVDVNDN ENSBTAP00000020655/1-1134 SERGHLTLFK QVDYEITKSY EIDVQAQDLG PNSIPAHCKI IIKVVDVNDN BACU004171/1-637 SERGHLTLFK QVDYEITKSY EIDVQAQDLG PNSIPAHCKI IIKVVDVNDN ENSTTRP00000002561/1-1128 SERGHLTLFK PVDYEITKSY EIDVQAQDLG PNSIPAHCKI IIKVVDVNDN bmy_11178T0/1-835 SERGHLTLFK QVDYEITKSY EIDVQAQDLG PNSIPAHCKI IIKVVDVNDN 351 400 ENSP00000355082/1-1135 KPEININLMS PGKEEISYIF EGDPIDTFVA LVRVQDKDSG LNGEIVCKLH ENSBTAP00000020655/1-1134 KPEISINLMS PGKEEISYIF EGDPIDTFVA LVRVQDKDSG LNGEIVCKLH BACU004171/1-637 KPEININLMS PGKEEISYIF EGDPIDTFVA LVRVQDKDSG LNGEIVCRLH ENSTTRP00000002561/1-1128 K-EININLMS --KEEISYIF EG-PID--LV AVRVQDKD-G LNGEIVCRLH bmy_11178T0/1-835 KPEININLMS PGKEEISYIF EGDPIDTFVA LVRVQDKDSG LNGEIVCRLH 401 450 ENSP00000355082/1-1135 GHGHFKLQKT YENNYLILTN ATLDREKRSE YSLTVIAEDR GTPSLSTVKH ENSBTAP00000020655/1-1134 GHGHFKLQKT YENNYLILTN ATLDREKRSE YSLTVIAEDK GTPSLSTVKH BACU004171/1-637 GHGHFKLQKT YENNYLILTN ATLDREKRSE YSLTVIAEDK GTPSLSTVKH ENSTTRP00000002561/1-1128 GHGHFKLQKT YENNYLILTN ATLDREKRSE YSLTVIAEDK GTPSLSTVKH bmy_11178T0/1-835 GHGHFKLQKT YENNYLILTN ATLDREKRSE YSLTVIAEDK GTPSLSTIKH 451 500 ENSP00000355082/1-1135 FTVQINDIND NPPHFQRSRY EFVISENNSP GAYITTVTAT DPDLGENGQV ENSBTAP00000020655/1-1134 FTVQINDIND NPPHFQRSRY EFAISENNSP GAYITTVTAT DPDLGENGQV BACU004171/1-637 FTVQINDIND NPPHFQRSRY EFAISENNSP GAYITTVTAT DPDLGENGQV ENSTTRP00000002561/1-1128 FTVQINDIND NPPHFQRSRY EFAISENNSP GAYITTVTAT DPDLGENGQV bmy_11178T0/1-835 FTVQINDVND NPPHFQRSRY EFAISENNSP GAYITTVTAT DPDLGENGQV 501 550 ENSP00000355082/1-1135 TYTILESFIL GSSITTYVTI DPSNGAIYAL RIFDHEEVSQ ITFVVEARDG ENSBTAP00000020655/1-1134 TYTILESFIL GSSITTYVTI DPSNGAIYAL RIFDHEEVSQ ITFVVEARDG BACU004171/1-637 TYTMLESFIL GSSITTYVTI DPSNGAIYAL RIFDHEEVSQ ITFVVEARDG ENSTTRP00000002561/1-1128 TYTILESFIL GSSITTYVTI DPSNGAIYAL RIFDHEEVSQ ITFVVEARDG bmy_11178T0/1-835 TYTMLESFIL GSSITTYVTI DPSNGAIYAL RIFDHEEVSQ ITFVVEARDG 551 600 ENSP00000355082/1-1135 GSPKQLVSNT TVVLTIIDEN DNVPVVIGPA LRNNTAEITI PKGAESGFHV ENSBTAP00000020655/1-1134 GSPKQLVSNT TVVLTIIDEN DNVPVVIGPA LRNNTAEISI PKGAESGFHV BACU004171/1-637 GSPKQLVSNT TVVLTIIDEN DNIPVVIGPA LRNNTAEIAI PKGAESGFHV ENSTTRP00000002561/1-1128 GSPKQLVSNT TVVLTIIDEN DNIPVVIGPA LRNNTAEISI PKGAESGFHV bmy_11178T0/1-835 GSPKQLVSNT TVVLTIIDEN DNIPVVIGPA LRNNTAEISI PKGAESGFHV 601 650 ENSP00000355082/1-1135 TRIRAIDRDS GVNAELSCAI VAGNEENIFI IDPRSCDIHT NVSMDSVPYT ENSBTAP00000020655/1-1134 TRIRAIDRDS GVNAELSCSI VAGNEENIFV IDPRSCDIHT NVSMESVPYT BACU004171/1-637 TRIRAMDRDS GVNAELSCSI VAGNEENIFV IDPRSS---- ---------- ENSTTRP00000002561/1-1128 TRIRAMDRDS GVNAELSCSI VAGNEENIFV IDPRSCDIHT NVSMESVPYT bmy_11178T0/1-835 TRIRAMDRDS GVNAELSCSI VAGNEENIFV IDPRSCDIHT NVSMESVPYT 651 700 ENSP00000355082/1-1135 EWELSVIIQD KGNPQLHTKV LLKCMIFEYA ESVTSTAMTS VSQASLDVSM ENSBTAP00000020655/1-1134 EWELSVVIQD KGNPQLHTKV LLKCVIFEYA ESVTSTAMTS VSQAPLDVSM BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 EWELSVVIQD KGNPQLHTKV LLKCMIFEYA ESVTSTAMTS VSQASLDVSM bmy_11178T0/1-835 EWELSVVIQD KGNPQLHTKV LLKCMIFEYA ESVTSTAMTS VSQASLDVSM 701 750 ENSP00000355082/1-1135 IIIISLGAIC AVLLVIMVLF ATRCNREKKD TRSYNCRVAE STYQHHPKRP ENSBTAP00000020655/1-1134 IIIISLGAIC AVLLVIMVLF ATRCNREKKD TRSYNCRVAE STYQHHPKRP BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 IIIISLGAIC AVLLVIMVLF ATRCNREKKD TRSYNCRVAE STYQHHPKRP bmy_11178T0/1-835 IIIISLGAIC AVLLVIMVLF ATRCNREKKD TRSYNCRVAE STYQHHPKRP 751 800 ENSP00000355082/1-1135 SRQIHKGDIT LVPTINGTLP IRSHHRSSPS SSPTLERGQM GSRQSHNSHQ ENSBTAP00000020655/1-1134 SRQIHKGDIT LVPTVNGTLP IRSHHRSSPS SSPTLERGQM GSRQSHNSHQ BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 SRQIHKGDIT LVPTVNGTLP IRSHHRPSPS SSPTLERGQM GSRQSHNSHQ bmy_11178T0/1-835 SRQIHKGDIT LVPTVNGTLP IRSHHRPSPS SSPTLERGQM GSRQSHNSHQ 801 850 ENSP00000355082/1-1135 SLNSLVTISS NHVPENFSLE LTHATPAVEQ VSQLLSMLHQ GQYQPRPSFR ENSBTAP00000020655/1-1134 SLNSLVTISS NHVPENFSLE LTHATPAVE- VSQLLSMLHQ GQYQPRPSFR BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 SLNSLVTISS NHVPENFSLE LTHATPAVEQ VSQLLSMLHQ GQYQPRPSFR bmy_11178T0/1-835 SLNSLVTISS NHVPENFSLE LTHATPAVE- ---------- ---------- 851 900 ENSP00000355082/1-1135 GNKYSRSYRY ALQDMDKFSL KDSGRGDSEA GDSDYDLGRD SPIDRLLGEG ENSBTAP00000020655/1-1134 GNKYSRSYRY ALQDMDKFSL KDSGRGDSEA GDSDYDLGRD SPIDRLLGEG BACU004171/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002561/1-1128 GNKYSRSYRY ALQDMDKFSL KDSGRGDSEA GDSDYDLGRD SPIDRLLGEG bmy_11178T0/1-835 ----VRSY-- ---------- ---------- ---------- ---------- 901 950 ENSP00000355082/1-1135 FSDLFLTDGR IPAAMRLCTE ECRVLGHSDQ CWMPPLPSPS SDYRSNMFIP ENSBTAP00000020655/1-1134 FSDLFLTDGR IPAAMRLCTE ECRVLGHSDQ CWMPPLPSPS SDYRSNMFIP BACU004171/1-637 ---------- ----MRLCTE ECRVLGHSDQ CWMPALPSPS SDYRSNMFIP ENSTTRP00000002561/1-1128 FSDLFLTDGR IPAAMRLCTE ECRVLGHSDQ CWMPPLPSPS SDYRSNMFIP bmy_11178T0/1-835 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000355082/1-1135 GEEFPTQPQQ QHPHQSLEDD AQPADSGEKK KSFSTFGKDS PNDEDTGDTS ENSBTAP00000020655/1-1134 GEEFPAQPQQ QHPHQSLEDD VQPVDSGEKK KSFSTFGKDS PSEEDSGDTS BACU004171/1-637 GEEFPAQPQQ QHPHPSLEDD TQPVDAGEKK KSFSTFGKDS PNDEDSGDTS ENSTTRP00000002561/1-1128 GEEFPAQPQQ QHPHPSLEDD TQPVDSGEKK KSFSTFGKDS PNDEDSGDTS bmy_11178T0/1-835 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000355082/1-1135 TSSLLSEMSS VFQRLLPPSL DTYSECSEVD RSNSLERRKG PLPAKTVGYP ENSBTAP00000020655/1-1134 TSSLLSEMSS VFQRLLPASL DTYSECTEMD RSNSLERRKG PLPAKTVGYP BACU004171/1-637 TSSLLSEMSN VFQRLLPPSL DTYSECSEID RSNSLERRKG PLSAKTVGYP ENSTTRP00000002561/1-1128 TSSLLSEMSN VFQRLLPPSL DTYSECSEMD RSNSLERRKG PLSAKTVGYP bmy_11178T0/1-835 ---------- ------PPPI H--------- ---------- ---------- 1051 1100 ENSP00000355082/1-1135 QGVAAWAAST HFQNPTTNCG PPLGTHSSVQ PSSKWLPAME EIPENYEEDD ENSBTAP00000020655/1-1134 QGVAAWAAST HFQNPTNNSG PPLGTHSSVQ PSSKWLPAME EIPENYEEDD BACU004171/1-637 QGVAAWAAST HFQNPTTNSG PPLGTHSSVQ PSSKWLPAME EIPENYEEDD ENSTTRP00000002561/1-1128 QGVAAWAAST HFQNPTTNSG PPLGTHSSVQ PSSKWLPAME EIPENYEEDD bmy_11178T0/1-835 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000355082/1-1135 FDNVLNHLND GKHELMDASE LVAEINKLLQ DVRQS ENSBTAP00000020655/1-1134 FDNVLNHLND GKHELMDASE LVAEINKLLQ DVRQS BACU004171/1-637 FDNVLNHLND GKHELMDASE LVAEINKLLQ DVRQS ENSTTRP00000002561/1-1128 FDNVLSHLGD GKHELMDASE LVAEINKLLQ DVRQS bmy_11178T0/1-835 ---------- ---------- ---------- -----