KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:14 2014 Check: 00 .. Name: ENSP00000356621/1-1280 Len: 1432 Check: 6770 Weight: 1.00 Name: ENSBTAP00000020658/1-1111 Len: 1432 Check: 8339 Weight: 1.00 Name: BACU004557/1-1143 Len: 1432 Check: 9918 Weight: 1.00 Name: bmy_08534T0/1-1208 Len: 1432 Check: 5979 Weight: 1.00 Name: ENSTTRP00000014141/1-1269 Len: 1432 Check: 9394 Weight: 1.00 // 1 50 ENSP00000356621/1-1280 MELSPSSGGA AEALSWPEMF PALESDSPLP PEDLDAVVPV SGAVAGGMLD ENSBTAP00000020658/1-1111 ---------- ---------- ---------- ---------- ---------- BACU004557/1-1143 ---------- ---------- ---------- ---------- ---------- bmy_08534T0/1-1208 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014141/1-1269 ---------- --------MF PGLKSDSPLP PEELDAVVPV SGAVAGGMLD 51 100 ENSP00000356621/1-1280 RILLESVCQQ QSWVRVYDVK GPPTHRLSCG QSPYTETTTW ERKYCILTDS ENSBTAP00000020658/1-1111 ---------- ---------- ---------- ---------- ---------- BACU004557/1-1143 ---------- ---------- ---------- ---------- ---------- bmy_08534T0/1-1208 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014141/1-1269 RILLESVCQQ QSWVRVYDVK GPPTHRLSCG QSPYTDTTTW ERKYCILTDS 101 150 ENSP00000356621/1-1280 QLVLLNKEKE IPVEGGQEQQ TDSTKGRCLR RTVSVPSEGQ FPEYPPEGAT ENSBTAP00000020658/1-1111 ---------- ---------- ---------- ---------- ---------- BACU004557/1-1143 ---------- ---------- ---------- ---------- --------MQ bmy_08534T0/1-1208 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014141/1-1269 QLVLLNKEKE IPVEGGQDQQ TDSTKGRCLR RTVSVPSEGQ FPEYPPEGAA 151 200 ENSP00000356621/1-1280 KLEVPAERSP RRRSISGTST SEKPNSMDTA NTSPFKVPGF FSKRLKGSIK ENSBTAP00000020658/1-1111 ---------- ---------- ------MDTA NTSPFKVPGF FSKRLKGSIK BACU004557/1-1143 TPEVPAERSP RRRSISGTST SEKPNSMDTA NTSPFKVPGF FSKRLKGSIK bmy_08534T0/1-1208 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014141/1-1269 KLEVPAERSP RRRSISGTST SEKPNSMDTA NTSPFKVPXX XXXXXXXXXX 201 250 ENSP00000356621/1-1280 RTKSQSKLDR NTSFRLPSLR STDDRSRGLP KLKESRSHES LLSPCSTVEC ENSBTAP00000020658/1-1111 RTKSQSKLDR NTSFRLPSLR NTDDRSRGLP KLKESRSHES LLSPCSAVEC BACU004557/1-1143 RTKSQSKLDR NTSFRLPSLR NTDDRSRGLP KLKESRSHES LLSPCSAVEC bmy_08534T0/1-1208 ---------- ---------- ----RSRGLP KLKESRSHES LLSPCSAVEC ENSTTRP00000014141/1-1269 XXXXXXXXXX XXXXXXXXXX XXXXXSRGLP KLKESRSHES LLSPCSAVEC 251 300 ENSP00000356621/1-1280 LDLGRGEPVS VKPLHSSILG QDFCFEVTYL SGSKCFSCNS ASERDKWMEN ENSBTAP00000020658/1-1111 LDLGRGEPVS VKPLHSSILG QDFCFEVTYL SGSKCFSCNS ASERDKWMEN BACU004557/1-1143 LDLGRGEPVS VKPLHSSILG QDFCFEVTYL SGSKCFSCNS ASERDKWMEN bmy_08534T0/1-1208 LDLGRGEPVS VKPLHSSILG QDFCFEVTYL SGSKCFSCNS ASERDKWMEN ENSTTRP00000014141/1-1269 LDLGRGEPVS VKPLHSSILG QDFCFEVTYL SGSKCFSCNS ASERDKWMEN 301 350 ENSP00000356621/1-1280 LRRTVQPNKD NCRRAENVLR LWIIEAKDLA PKKKYFCELC LDDTLFARTT ENSBTAP00000020658/1-1111 LRRTVQPNKD NCRRAENVLR LWIIEAKDLA PKKKYFCELC LDDTLFARTT BACU004557/1-1143 LRRTVQPNKD NCRRAENVLR LWIIEAKDLA PKKKYFCELC LDDTLFARTT bmy_08534T0/1-1208 LRRTVQPNKD NCRRAENVLR LWIIEAKDLA PKKKYFCELC LDDTLFARTT ENSTTRP00000014141/1-1269 LRRTVQPNKD NCRRAENVLR LWIIEAKDLA PKKKYFCELC LDDTLFARTT 351 400 ENSP00000356621/1-1280 SKTKADNIFW GEHFEFFSLP PLHSITVHIY KDVEKKKKKD KNNYVGLVNI ENSBTAP00000020658/1-1111 SKTKADNIFW GEHFEFYSLP PLHSITVHIY KDVEKKKKKD KNNYVGLVNI BACU004557/1-1143 SKTKADNIFW GEHFEFYSLP PLHSITVHIY KDVEKKKKKD KNNYVGLVNI bmy_08534T0/1-1208 SKTKADNIFW GEHFEFYSLP PLHSITVHIY KDVEKKKKKD KNNYVGLVNI ENSTTRP00000014141/1-1269 SKTKADNIFW GEHFEFYSLP PLHSITVHIY KDVEKKKKKD KNNYVGLVNI 401 450 ENSP00000356621/1-1280 PTASVTGRQF VEKWYPVSTP TPNKGKTGGP SIRIKSRFQT ITILPMEQYK ENSBTAP00000020658/1-1111 PTASVTGRQF VEKWYPVSTP TPNKGKTGGP SIRIKSRFQT ITILPMEQYK BACU004557/1-1143 PTASVTGRQF VEKWYPVSTP TPNKGKTGGP SIRIKSRFQT ITILPMEQYK bmy_08534T0/1-1208 PTASVTGRQF VEKWYPVSTP TPNKGKTGGP SIRIKSRFQT ITILPMEQYK ENSTTRP00000014141/1-1269 PTASVTGRQF VEKWYPVSTP TPNKGKTGGP SIRIKSRFQT ITILPMEQYK 451 500 ENSP00000356621/1-1280 EFAEFVTSNY TMLCSVLEPV ISVRNKEELA CALVHILQST GRAKDFLTDL ENSBTAP00000020658/1-1111 EFAEFVTSNY TMLCSVLEPV ISVRNKEELA CALVHILQST GRAKDFLTDL BACU004557/1-1143 EFAEFVTSNY TMLCSVLEPV ISVRNKEELA CALVHILQST GRAKDFLTDL bmy_08534T0/1-1208 EFAEFVTSNY TMLCSVLEPV ISVRNKEELA CALVHILQST GRAKDFLTDL ENSTTRP00000014141/1-1269 EFAEFVTSNY TMLCSVLEPV ISVRNKEELA CALVHILQST GRAKDFLTDL 501 550 ENSP00000356621/1-1280 VMSEVDRCGE HDVLIFRENT IATKSIEEYL KLVGQQYLHD ALGEFIKALY ENSBTAP00000020658/1-1111 VMSEVDRCGE HDVLIFRENT IATKSIEEYL KLVGQQYLHD ALGEFIKALY BACU004557/1-1143 VMSEVDRCGE HDVLIFRENT IATKSIEEYL KLVGQQYLHD ALGEFIKALY bmy_08534T0/1-1208 VMSEVDRCGE HDVLIFRENT IATKSIEEYL KLVGQQYLHD ALGEFIKALY ENSTTRP00000014141/1-1269 VMSEVDRCGE HDVLIFRENT IATKSIEEYL KLVGQQYLHD ALGEFIKALY 551 600 ENSP00000356621/1-1280 ESDENCEVDP SKCSSSELID HQSNLKMCCE LAFCKIINSY CVFPRELKEV ENSBTAP00000020658/1-1111 ESDENCEVDP SKCSSSELLD HQSNLKMCCE LAFCKIINSY CVFPRELKEV BACU004557/1-1143 ESDENCEVDP SKCSSSELID HQSNLKMCCE LAFCKIINSY CVFPRELKEV bmy_08534T0/1-1208 ESDENCEVDP SKCSSSELID HQSNLKMCCE LAFCKIINSY CVFPRELKEV ENSTTRP00000014141/1-1269 ESDENCEVDP SKCSSSELID HQSNLKMCCE LAFCKIINSY CVFPRELKEV 601 650 ENSP00000356621/1-1280 FASWKQQCLN RGKQDISERL ISASLFLRFL CPAIMSPSLF NLMQEYPDDR ENSBTAP00000020658/1-1111 FASWKQQCLN RGKQDISERL ISASLFLRFL CPAIMSPSLF NLMQEYPDDR BACU004557/1-1143 FASWKQQCLN RSKQDISERL ISASLFLRFL CPAIMSPSLF NLMQEYPDDR bmy_08534T0/1-1208 FASWKQQCLN RSKQDISERL ISASLFLRFL CPAIMSPSLF NLMQEYPDDR ENSTTRP00000014141/1-1269 FASWKQQCLN RSKQDISERL ISASLFLRFL CPAIMSPSLF NLMQEYPDDR 651 700 ENSP00000356621/1-1280 TSRTLTLIAK VIQNLANFAK FGNKEEYMAF MNDFLEHEWG GMKRFLLEIS ENSBTAP00000020658/1-1111 TSRTLTLIAK VIQNLANFAK FGNKEEYMAF MNDFLEHEWG GMKRFLLEIS BACU004557/1-1143 TSRTLTLIAK VIQNLANFAK FGNKEEYMAF MNDFLEHEWG GMKRFLLEIS bmy_08534T0/1-1208 TSRTLTLIAK VIQNLANFAK FGNKEEYMAF MNDFLEHEWG GMKRFLLEIS ENSTTRP00000014141/1-1269 TSRTLTLIAK VIQNLANFAK FGNKEEYMAF MNDFLEHEWG GMKRFLLEIS 701 750 ENSP00000356621/1-1280 NPDTISNTPG FDGYIDLGRE LSVLHSLLWE VVSQLDK--- ----ATVAKL ENSBTAP00000020658/1-1111 NPDTISNTPG FDGYIDLGRE LSVLHSLLWE VVSQLDKGEN SFLQATVAKL BACU004557/1-1143 NPDTISNTPG FDGYIDLGRE LSVLHSLLWE VVSQLDKGEN SFLQATVAKL bmy_08534T0/1-1208 NPDTISNTPG FDGYIDLGRE LSVLHSLLWE VVSQLDKGEN SFLQATVAKL ENSTTRP00000014141/1-1269 NPDTISNTPG FDGYIDLGRE LSVLHSLLWE VVSQLDKGEN SFLQATVAKL 751 800 ENSP00000356621/1-1280 GPLPRVLADI TKSLTNPTPI QQQLRRFTEH NSSPNVSGSL SSGLQKIFED ENSBTAP00000020658/1-1111 GPLPRVLADI TKSLTNPTPI QQQLRRFTEH NSSPNVSGSL SSGLQKIFED BACU004557/1-1143 GPLPRVLADI TKSLTNPTPI QQQLRRFTEH NSSPNVSGSL SSGLQKIFED bmy_08534T0/1-1208 GPLPRVLADI TKSLTNPTPI QQQLRRFTEH NSSPNVSGSL SSGLQKIFED ENSTTRP00000014141/1-1269 GPLPRVLADI TKSLTNPTPI QQQLRRFTEH NSSPNVSGSL SSGLQKIFED 801 850 ENSP00000356621/1-1280 PTDSDLHKLK SPSQDNTDSY FRGKTLLLVQ QASSQSMTYS EKDERESSLP ENSBTAP00000020658/1-1111 PTDSDLHKLK SPSQDNTDSY FRGKTLLLVQ QASSQSMTYS EKDEKESSLP BACU004557/1-1143 PTDSDLHKLK SPSQDNTDSY FRGKTLLLVQ QASSQSMTYS EKDEKESSLP bmy_08534T0/1-1208 PTDSDLHKLK SPSQDNTDSY FRGKTLLLVQ QASSQSMTYS EKDEKESSLP ENSTTRP00000014141/1-1269 PTDSDLHKLK SPSQDNTDSY FRGKTLLLVQ QASSQSMTYS EKDEKENSLP 851 900 ENSP00000356621/1-1280 NGRSVSLMDL QDTHAAQVEH ASVMLDVPIR LTGSQLSITQ VASIKQLRET ENSBTAP00000020658/1-1111 NGRSISLMDL QETHAAQAEH PSVILDVPMR LTGSQLSITQ VASIKQLRET BACU004557/1-1143 NGRSISLMDL QDTHAAQVEH ASVMLDVPMR LTGSQLSITQ VASIKQLRET bmy_08534T0/1-1208 NGRSISLMDL QDTHAAQVEH ASVMLDVPMR LTGSQLSITQ VASIKQLRET ENSTTRP00000014141/1-1269 NGRSISLMDL QDTHAAQVEH ASVMLDMPMR LTGSQLSITQ VASIKQLRET 901 950 ENSP00000356621/1-1280 QSTPQSAPQV RRPLHPALNQ PGGLQPLSFQ NPVYHLNNPI PAMPKASIDS ENSBTAP00000020658/1-1111 QSTPQSAPQV RRPLHPALNQ PGSLQPLSFQ NPVYHLSNPI PAMPKASVDS BACU004557/1-1143 QSTPQSAPQV RRPLHPALNQ PGSLQPLSFQ NPVYHLNNPI PAMPKASVDS bmy_08534T0/1-1208 QSTPQSAPQV RRPLHPALNQ PGSLQPLSFQ NPVYHLNNPI PAMPKASVDS ENSTTRP00000014141/1-1269 QSTPQSAPQV RRPLHPALNQ PGSLQPLSFQ NPVYHLNNPI PAMPKASVDS 951 1000 ENSP00000356621/1-1280 SLENLSTASS RSQSNSEDFK LSGPSNSSME DFTKRSTQSE DFSRRHTVPD ENSBTAP00000020658/1-1111 SLENLSTASS RSQSNSEDFK LSGPSNSSME DFTKRSTQSE DFSRRHTMPD BACU004557/1-1143 SLENLSTASS RSQSNSEDFK LSGPSNSSME DFTKRSTQSE DFSRRHTVSD bmy_08534T0/1-1208 SLENLSTASS RSQSNSEDFK LSGPSNSSME DFTKRSTQSE DFSRRHTVSD ENSTTRP00000014141/1-1269 SLENLSTASS RSQSNSEDFK LSGPSNSSME DFTKRSTQSE DFSRRHTVSD 1001 1050 ENSP00000356621/1-1280 RHIPLALPRQ NSTGQAQIRK VDQGGLGARA KAPPSLPHSA SLRSTGSMSV ENSBTAP00000020658/1-1111 RHIPLALPRQ NSTGQTQLRK MDPAGLGARA KAPPSLPHSA SLRSTGSMSV BACU004557/1-1143 RYIPLALPRQ NSTGQAQIRK MDQAGLGARA KAPPSLPHSA SLRSTGSMSL bmy_08534T0/1-1208 RHIPLALPRQ NSTGQAQIRK MDQAGLGARA KAPPSLPHSA SLRSTGSMSL ENSTTRP00000014141/1-1269 RHIPLALPRQ NSTGQAQIRK MDQAGLGARA KAPPSLPHSA SLRSTGSMSL 1051 1100 ENSP00000356621/1-1280 VSAALVAEPV QNGSRSRQQS SSSRESPVPK VRAIQRQQTQ QVQSPVDSAT ENSBTAP00000020658/1-1111 ASAALVAEPL QNGSRSRQQS SSSRESPVPK VRAIQRQQTQ QVQSPVDSAT BACU004557/1-1143 ASAALVAEPV QNGSRSRQQS SSSRESPVPK VRAIQRQQTQ QVQSPVDSAT bmy_08534T0/1-1208 ASAALVAEPV QNGSRSRQQS SSSRESPVPK VRAIQRQQTQ QVQSPVDSAT ENSTTRP00000014141/1-1269 ASAALVAEPV QNGSRSRQQS SSSRESPVPK VRAIQRQQTQ QVQSPVDSAT 1101 1150 ENSP00000356621/1-1280 MSPVERTAAW VLNNGQYEED VEETEQNLDE AKHAEKYEQE ITKLKERLRV ENSBTAP00000020658/1-1111 MSPVERTAAW VLNNGQYEED VEETEQNQDE AKHAEKYEQE ITKLKERLRV BACU004557/1-1143 MSPVERTAAW VLNNGQYEED VEETEQNQDE AKHAEKYEQE ITKLKERLRV bmy_08534T0/1-1208 MSPVERTAAW VLNNGQYEED VEETEQNQDE AKHAEKYEQE ITKLKERLRV ENSTTRP00000014141/1-1269 MSPVERTAAW VLNNGQYEED VEETEQNQDE AKHAEKYEQE ITKLKERLRV 1151 1200 ENSP00000356621/1-1280 SSRRLEEYER RLLVQEQQMQ KLLLEYKARL EDSEERLRRQ QEEKDSQMKS ENSBTAP00000020658/1-1111 SSRRLEEYER RLLVQEQQMQ KLLLEYKARL EDSEERLRRQ QEEKDSQMKS BACU004557/1-1143 SSRRLEEYER RLLVQEQQMQ KLLLEYKARL EDSEERLRRQ QEEKDSQMKS bmy_08534T0/1-1208 SSRRLEEYER RLLVQEQQMQ KLLLEYKARL EDSEERLRRQ QEEKDSQMKS ENSTTRP00000014141/1-1269 SSRRLEEYER RLLVQEQQMQ KLLLEYKARL EDSEERLRRQ QEEKDSQMKS 1201 1250 ENSP00000356621/1-1280 IISRLMAVEE ELKKDHAEMQ AVIDAKQKII DAQ------- ---------- ENSBTAP00000020658/1-1111 IISRLMAVEE ELKKDHAEMQ AVIDAKQKII DAQ------- ---------- BACU004557/1-1143 IISRLMAVEE ELKKDHAEMQ AVIDAKQKII DAQ------- ---------- bmy_08534T0/1-1208 IISRLMAVEE ELKKDHAEMQ AVIDAKQKII DAQSETNNKR QCSLDVAGLA ENSTTRP00000014141/1-1269 IISRLMAVEE ELKKDHAEMQ AVIDAKQKII DAQ------- ---------- 1251 1300 ENSP00000356621/1-1280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020658/1-1111 ---------- ---------- ---------- ---------- ---------- BACU004557/1-1143 ---------- ---------- ---------- ---------- ---------- bmy_08534T0/1-1208 TECITSLKTT QPGSRFSPLS TELGVRLKAQ PWEECVMGLL LPHIHETRKS ENSTTRP00000014141/1-1269 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSP00000356621/1-1280 ---------- ---------- ---------- ------EKRI VSLDSANTRL ENSBTAP00000020658/1-1111 ---------- ---------- ---------- ------EKRI VSLDSANTRL BACU004557/1-1143 ---------- ---------- ---------- ------EKRI VSLDSANTRL bmy_08534T0/1-1208 SVSPRAVVFT LHPWAARFRH SSAAHGPVEL CYVDSKEKRI VSLDSANTRL ENSTTRP00000014141/1-1269 ---------- ---------- ---------- ------EKRI VSLDSANTRL 1351 1400 ENSP00000356621/1-1280 MSALTQVKER YSMQVRNGIS PTNPTKLSIT ENGEFKNS-- ---------- ENSBTAP00000020658/1-1111 MSALTQVKER YSMQVRNGIS PTNPTKLSIT ENGEFKNS-- ---------- BACU004557/1-1143 MSALTQVKER YSMQVRNGIS PTNPTKLSIT ENGEFKNSS- ---------- bmy_08534T0/1-1208 MSALTQVKER YSMQVRNGIS PTNPTKLSIT ENGKHANTEI QTQQFIPLIN ENSTTRP00000014141/1-1269 MSALTQVKER YSMQVRNGIS PTNPTKLSIT ENGEFKNS-- ---------- 1401 1450 ENSP00000356621/1-1280 ---------- ---------- --SC------ -- ENSBTAP00000020658/1-1111 ---------- ---------- --SC------ -- BACU004557/1-1143 ---------- ---------- --CCWAL--- -- bmy_08534T0/1-1208 QDWFWMDSYL IWGYTVPEDT DKSCWIKTGL QE ENSTTRP00000014141/1-1269 ---------- ---------- --SC------ --