KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:17 2014 Check: 00 .. Name: ENSTTRP00000016487/1-629 Len: 629 Check: 1928 Weight: 1.00 Name: bmy_04636T0/1-347 Len: 629 Check: 5697 Weight: 1.00 Name: ENSBTAP00000020665/1-605 Len: 629 Check: 881 Weight: 1.00 Name: ENSP00000362650/1-629 Len: 629 Check: 6883 Weight: 1.00 Name: BACU020577/1-578 Len: 629 Check: 1997 Weight: 1.00 // 1 50 ENSTTRP00000016487/1-629 IASETRQPHQ PSSRLAPTXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_04636T0/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020665/1-605 -LECTRKPPA TRNYLAPVVS AKVEKPTL-- ---------- ---------- ENSP00000362650/1-629 MVRGARQPQQ PRSRLAPRLT GTVEKPPRKR RSSIRGSGDS SHSQSQGERY BACU020577/1-578 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000016487/1-629 XXXXXXTEFA LKEIMSSGGA EDDIPQGERK TVTDFCYLLD KSKQLFNGLR bmy_04636T0/1-347 -MFT------ ---------- ---------- -----CH--- --------YR ENSBTAP00000020665/1-605 -ENLHKTEFA LKEIMSSGGA EDDIPQGERK TVTDFCYLLD KSKQLFNGLR ENSP00000362650/1-629 QHFTEKTEFA LKEIMSSGGA EDDIPQGERK TVTDFCYLLD KSKQLFNGLR BACU020577/1-578 -MFSYRTEFA LKEIMSSGGA EDDIPQGERK TVTDFCYLLD KSKQLFNGLR 101 150 ENSTTRP00000016487/1-629 DLPQYGQKQW QSYFGRTFDV YTKLWKFQQQ HRQVLDNRYG LKRWQIGEIA bmy_04636T0/1-347 DLPQYGQKQW QSYFGRTFDV YTKLWKFQQQ HRQVLDNRYG LKRWQIGEIA ENSBTAP00000020665/1-605 DLPQYGQKQW QSYFGRTFDV YTKLWKFQQQ HRQVLDNRYG LKRWQIGEIA ENSP00000362650/1-629 DLPQYGQKQW QSYFGRTFDV YTKLWKFQQQ HRQVLDNRYG LKRWQIGEIA BACU020577/1-578 DLPQYGQKQW QSYFGRTFDV YTKLWKFQQQ HRQVLDNRYG LKRWQIGEIA 151 200 ENSTTRP00000016487/1-629 SKIGQLYYHY XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPELVVK bmy_04636T0/1-347 SKIGQLYYHY YLRTSETSYL NEAFSFYSAI RQRSYYSQVN KEDRPELVVK ENSBTAP00000020665/1-605 SKIGQLYYHY YLRTSETSYL NEAFSFYSAI RQRSYYSQVN KEDRPELVVK ENSP00000362650/1-629 SKIGQLYYHY YLRTSETSYL NEAFSFYSAI RQRSYYSQVN KEDRPELVVK BACU020577/1-578 SKIGQLYYHY YLRTSETSYL NEAFSFYSAI RQRSYYSQVN KEDRPELVVK 201 250 ENSTTRP00000016487/1-629 KLRYYARFIV VCLLLNKMDV VKDLVKELSD EIEDYTHRFN TEDQVEWNLV bmy_04636T0/1-347 KLRYYARFIV VCLLLNKMDV VKDLVKELSD EIEDYTHRFN TEDQVEWNLV ENSBTAP00000020665/1-605 KLRYYARFIV VCLLLNKMDV VKDLVKELSD EIEDYTHRFN TEDQVEWNLV ENSP00000362650/1-629 KLRYYARFIV VCLLLNKMDV VKDLVKELSD EIEDYTHRFN TEDQVEWNLV BACU020577/1-578 KLRYYARFIV VCLLLNKMDV VKDLVKELSD EIEDYTHRFN TEDQVEWNLV 251 300 ENSTTRP00000016487/1-629 LQEVAAFIEA DPVMVLNDDN TIVITSNRLA ETGAPLLEQG MIVGQLSLAD bmy_04636T0/1-347 LQEVAAFIEA DPVMVLNDDN TIVITSNRLA ETGAPLLEQG MIVGQLSLAD ENSBTAP00000020665/1-605 LQEVAAFIEA DPVMVLNDDN TIVITSNRLA ETGAPLLEQG MIVGQLSLAD ENSP00000362650/1-629 LQEVAAFIEA DPVMVLNDDN TIVITSNRLA ETGAPLLEQG MIVGQLSLAD BACU020577/1-578 LQEVAAFIEA DPVMVLNDDN TIVITSNRLA ETGAPLLEQG MIVGQLSLAD 301 350 ENSTTRP00000016487/1-629 ALIIGNCNNQ VKFSELTVDM FRMLQALERE PMNLASQMNK PGMQESADKP bmy_04636T0/1-347 ALIIGNCNNQ VKFSELTVDM FRMLQALERE PMNLASQMNK PGMQ------ ENSBTAP00000020665/1-605 ALIIGNCNNQ VKFSELTVDM FRMLQALERE PMNLASQMNK PGMQESADKP ENSP00000362650/1-629 ALIIGNCNNQ VKFSELTVDM FRMLQALERE PMNLASQMNK PGMQESADKP BACU020577/1-578 ALIIGNCNNQ VKFSELTVDM FRMLQALERE PMNLASQMNK PGMQESADKP 351 400 ENSTTRP00000016487/1-629 TRRENPHKYL LYKPTFSQLY TFLAASFKEL PANSVXXXXX XXXGVFPTGR bmy_04636T0/1-347 ---------- ---------- --------EL PANSVLLIYL SATGVFPTGR ENSBTAP00000020665/1-605 TRRENPHKYL LYKPTFSQLY TFLAASFKEL PANSVLLIYL SATGVFPTGR ENSP00000362650/1-629 TRRENPHKYL LYKPTFSQLY TFLAASFKEL PANSVLLIYL SATGVFPTGR BACU020577/1-578 TRRENPHKYL LYKPTFSQLY TFLAASFKEL PANSVLLIYL SATGVFPTGR 401 450 ENSTTRP00000016487/1-629 SDSEGPYDFG GVLTNSNRDI INGDAIHKRN QSHKEMHCLH PGDLYPFTRK bmy_04636T0/1-347 SDSEGPYDFG GVLTNSNRDI INGDAIHKRN QSHKEMHCLH PGDLYPFTRK ENSBTAP00000020665/1-605 SDSEGPYDFG GVLTNSNRDI INGDAIHKRN QSHKEMHCLH PGDLYPFTRK ENSP00000362650/1-629 SDSEGPYDFG GVLTNSNRDI INGDAIHKRN QSHKEMHCLH PGDLYPFTRK BACU020577/1-578 SDSEGPYDFG GVLTNSNRDI INGDAIHKRN QSHKEMHCLH PGDLYPFTRK 451 500 ENSTTRP00000016487/1-629 PLFIIVDSSN SVAYKNFTNL FGQPLVCLLS PTAYPKALQD QSQRGSLFTL bmy_04636T0/1-347 PLFIIVDSSN SVAYK----- ---------- ---------- ---------- ENSBTAP00000020665/1-605 PLFIIVDSSN SVAYKNFTNL FGQPLVCLLS PTAYPKALQD QSQRGSLFTL ENSP00000362650/1-629 PLFIIVDSSN SVAYKNFTNL FGQPLVCLLS PTAYPKALQD QSQRGSLFTL BACU020577/1-578 PLFIIVDSSN SVAYKNFTNL FGQPLVCLLS PTAYPKALQD QSQRGSLFTL 501 550 ENSTTRP00000016487/1-629 FLNNPLMAFL FVSGLSSMRR GLWEKCQEYL RKINRDIAQL LTHSRSIDQA bmy_04636T0/1-347 ---------- -VSSMSAIAR ---------- ---------- ---------- ENSBTAP00000020665/1-605 FLNNPLMAFL FVSGLSSMRR GLWEKCQEYL RKINRDIAQL LTHSRSIDQA ENSP00000362650/1-629 FLNNPLMAFL FVSGLSSMRR GLWEKCQEYL RKINRDIAQL LTHSRSIDQA BACU020577/1-578 FLNNPLMAFL FVSGLSSMRR GLWEKCQEYL RKINRDIAQL LTHSRSIDQA 551 600 ENSTTRP00000016487/1-629 FLQFFGDEFL RLLLTRFIFC SATMRMHKIF RETRNYPESY PQLPRDETVE bmy_04636T0/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020665/1-605 FLQFFGDEFL RLLLTRFIFC SATMRMHKIF RETRNYPESY PQLPRDETVE ENSP00000362650/1-629 FLQFFGDEFL RLLLTRFIFC SATMRMHKIF RETRNYPESY PQLPRDETVE BACU020577/1-578 FLQFFGDEFL RLLLTRFIFC SATMRMHKIF RETRNYPESY PQLPRDETVE 601 650 ENSTTRP00000016487/1-629 NPHLQKHILE LASILDVRNV FLENTIDDY bmy_04636T0/1-347 ---------- ---------- --------- ENSBTAP00000020665/1-605 NPHLQKHILE LASILDVRNV FLENTIDDY ENSP00000362650/1-629 NPHLQKHILE LASILDVRNV FFENTIDDY BACU020577/1-578 NPHLQKHILE LASILDVRNV FLENTIDEY