KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:17 2014 Check: 00 .. Name: ENSTTRP00000014527/1-442 Len: 548 Check: 859 Weight: 1.00 Name: ENSP00000354340/1-463 Len: 548 Check: 8008 Weight: 1.00 Name: ENSBTAP00000020672/1-463 Len: 548 Check: 6618 Weight: 1.00 Name: bmy_01242T0/1-548 Len: 548 Check: 2410 Weight: 1.00 Name: BACU015112/1-442 Len: 548 Check: 615 Weight: 1.00 // 1 50 ENSTTRP00000014527/1-442 ---------- ---------- -MAVDGGCGD TGDWEGRWNH VKKFLERSGP ENSP00000354340/1-463 MADGEEPEKK RRRIEELLAE KMAVDGGCGD TGDWEGRWNH VKKFLERSGP ENSBTAP00000020672/1-463 MADGEEPEKK RRRIEELLAE KMAVDGGCGD TGDWEGRWNH VKKFLERSGP bmy_01242T0/1-548 MADGEEPEKK RRRIEELLAE KMAVDGGCGD TGDWEGRWNH VKKFLERSGP BACU015112/1-442 ---------- ---------- -MAVDGGCGD TGDWEGRWNH VKKFLERSGP 51 100 ENSTTRP00000014527/1-442 FTHPDFEPST ESLQFLLDTC KVLVIGAGGL GCELLKNLAL SGFRQIHVID ENSP00000354340/1-463 FTHPDFEPST ESLQFLLDTC KVLVIGAGGL GCELLKNLAL SGFRQIHVID ENSBTAP00000020672/1-463 FTHPDFEPST ESLQFLLDTC KVLVIGAGGL GCELLKNLAL SGFRQIHVID bmy_01242T0/1-548 FTHPDFEPST ESLQFLLDTC KVLVIGAGGL GCELLKNLGL SGFRQIHVID BACU015112/1-442 FTHPDFEPST ESLQFLLDTC KVLVIGAGGL GCELLKNLGL SGFRQIHVID 101 150 ENSTTRP00000014527/1-442 MDTIDVSNLN RQFLFRPKDV GRPKAEVAAE FLNDRVPNCN VVPHFNKIQD ENSP00000354340/1-463 MDTIDVSNLN RQFLFRPKDI GRPKAEVAAE FLNDRVPNCN VVPHFNKIQD ENSBTAP00000020672/1-463 MDTIDVSNLN RQFLFRPKDV GRPKAEVAAE FLNDRIPNCN VVPHFNKIQD bmy_01242T0/1-548 MDTIDVSNLN RQFLFRPKDV GRPKAEVAAE FLNDRVPNCN VVPHFNKIQD BACU015112/1-442 MDTIDVSNLN RQFLFRPKDV GRPKAEVAAE FLNDRVPNCN VVPHFNKIQD 151 200 ENSTTRP00000014527/1-442 FNDTFYRQFH IIVCGLDSVI ARRWINGMLX XXXXXXXXXX XXXXXXXXXX ENSP00000354340/1-463 FNDTFYRQFH IIVCGLDSII ARRWINGMLI SLLNYEDGVL DPSSIVPLID ENSBTAP00000020672/1-463 FNDTFYRQFH IIVCGLDSII ARRWINGMLI SLLNYEDGVL DPSSIVPLID bmy_01242T0/1-548 FNDTFYRQFH IIVCGLDSVI ARRWINGMLI SLLNYEDGVL DPSSIVPLID BACU015112/1-442 FNDTFYRQFH IIVCGLDSVI ARRWINGMLI SLLNYEDGVL DPSSIVPLID 201 250 ENSTTRP00000014527/1-442 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XVNFPMCTIA SMPRLPEHCI ENSP00000354340/1-463 GGTEGFKGNA RVILPGMTAC IECTLELYPP QVNFPMCTIA SMPRLPEHCI ENSBTAP00000020672/1-463 GGTEGFKGNA RVILPGMTAC IECTLELYPP QVNFPMCTIA SMPRLPEHCI bmy_01242T0/1-548 GGTEGFKGNA RVILPGMTAC VECTLELYPP QVNFPMCTIA SMPRLPEHCI BACU015112/1-442 GGTEGFKGNA RVILPGMTAC VECTLELYPP QVNFPMCTIA SMPRLPEHCI 251 300 ENSTTRP00000014527/1-442 EYVRILQWPK EQPFGEGVPL DGDDPDHIQW IFQKSLERAS QYNIRGITYR ENSP00000354340/1-463 EYVRMLQWPK EQPFGEGVPL DGDDPEHIQW IFQKSLERAS QYNIRGVTYR ENSBTAP00000020672/1-463 EYVRILQWPK EQPFGEGVPL DGDDPDHIQW IFQKALERAS QYNIRGVTYR bmy_01242T0/1-548 EYVRILQWPK EQPFGEGVPL DGDDPDHIQW IFQKSLERAS QYNIRGITYR BACU015112/1-442 EYVRILQWPK EQPFGEGVPL DGDDPDHIQW IFQKSLERAS QYNIRGITYR 301 350 ENSTTRP00000014527/1-442 LTQXXXXXXX XXXXXXXXXX X--------- ---------- ---------- ENSP00000354340/1-463 LTQGVVKRII PAVASTNAVI A--------- ---------- ---------- ENSBTAP00000020672/1-463 LTQGVVKRII PAVASTNAVI A--------- ---------- ---------- bmy_01242T0/1-548 LTQGVVKRII PAVASTNAAI AGFDSIPKLI FLQLLDLRKL VFWEFDYLLG BACU015112/1-442 LTQGVVKRII PAVASTNATI A--------- ---------- ---------- 351 400 ENSTTRP00000014527/1-442 ---------- ---------- ---------- ---------- ---------- ENSP00000354340/1-463 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020672/1-463 ---------- ---------- ---------- ---------- ---------- bmy_01242T0/1-548 WMVYNRLHSN LKKREKNMRW YSVIWSIQNK YKMLLSQFLK IRVFIYLKHL BACU015112/1-442 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000014527/1-442 ------XVCA TEVFKIATSA YIPLNNYLVF NDVDGLYTYT FEAERKENCP ENSP00000354340/1-463 ------AVCA TEVFKIATSA YIPLNNYLVF NDVDGLYTYT FEAERKENCP ENSBTAP00000020672/1-463 ------AVCA TEVFKIATSA YIPLNNYLVF NDVDGLYTYT FEAERKENCP bmy_01242T0/1-548 YFLSALAVCA TEVFKIATSA YIPLNNYLVF NDVDGLYTYT FEAERKENCP BACU015112/1-442 ------AVCA TEVFKIATSA YIPLNNYLVF NDVDGLYTYT FEAERKENCP 451 500 ENSTTRP00000014527/1-442 ACSQLPQNIQ FSPSAKLQEV LDYLTNSASL QMKSPAITAT LEGKNRTLYL ENSP00000354340/1-463 ACSQLPQNIQ FSPSAKLQEV LDYLTNSASL QMKSPAITAT LEGKNRTLYL ENSBTAP00000020672/1-463 ACSQLPQNIQ FSPSAKLQEV LDYLTNSASL QMKSPAITAT LEGKNRTLYL bmy_01242T0/1-548 ACSQLPQNIQ FSPSAKLQEV LDYLTNSASL QMKSPAITAT LEGKNRTLYL BACU015112/1-442 ACSQLPQNIQ FSPSAKLQEV LDYLTNSASL QMKSPAITAT LEGKNRTLYL 501 550 ENSTTRP00000014527/1-442 QSVTSIEERT RPNLSKTLKE LGLVDGQELA VADVTTPQTV LFKLHFTS ENSP00000354340/1-463 QSVTSIEERT RPNLSKTLKE LGLVDGQELA VADVTTPQTV LFKLHFTS ENSBTAP00000020672/1-463 QSVTSIEERT RPNLSKTLKE LGLVDGQELA VADVTTPQTV LFKLHFTS bmy_01242T0/1-548 QSVTSIEERT RPNLSKTLKE LGLVDGQELA VADVTTPQTV LFKLHFTS BACU015112/1-442 QSVTSIEERT RPNLSKTLKE LGLVDGQELA VADVTTPQTV LFKLHFTS