KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:18 2014 Check: 00 .. Name: bmy_01966T0/1-287 Len: 560 Check: 2376 Weight: 1.00 Name: ENSBTAP00000020677/1-545 Len: 560 Check: 7643 Weight: 1.00 Name: BACU016977/1-509 Len: 560 Check: 4975 Weight: 1.00 Name: ENSTTRP00000011799/1-549 Len: 560 Check: 6220 Weight: 1.00 // 1 50 bmy_01966T0/1-287 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020677/1-545 MSRHSQDERL GLPQPPALLP LLLLLLAVAV PLSQAGVYYA TAYWMPTEKT BACU016977/1-509 ---------- ---------- ---------- ------VYYA TAYWMPTEKR ENSTTRP00000011799/1-549 MSRRSPDGSL GLLSPPALL- LLLLLLAAVV PSGLAGVYYA TAYWMPTEKR 51 100 bmy_01966T0/1-287 ---------- ---------- ---------- ---------- -MLICIF--- ENSBTAP00000020677/1-545 IQVKNVLDRK GDAYGFYNNS VKTTGWGILE IKAGYGSQSL SNEIIMFAAG BACU016977/1-509 IQVKNVLDRN GDAYGFYNNS VKTTGWGILE IRAGYGSQSL SNEIVMFAAG ENSTTRP00000011799/1-549 IQVQNVLDRN GDAYGFYNNS VKTTGWGILE IRAGYGSRSL SNEIVMFAAG 101 150 bmy_01966T0/1-287 ---------- -------VFP V--------- ---------- ---------- ENSBTAP00000020677/1-545 FLEGYLTAPH MDDHFTNLYP QLIKKRSMLN KVQDFLTKQD QWTRENIKYY BACU016977/1-509 FLEGYLTAPH MYDHFTNLYP QLINKRSVVD KVQEFLTKQD QWARDNIKNN ENSTTRP00000011799/1-549 FLEGYLTAPH MFDHFTNLYP QLIKERSVLD KVQEFLTKQD QWARANIKNY 151 200 bmy_01966T0/1-287 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020677/1-545 KSDPFWRHAD YVMAQMDGLF AGATKRAVLE GKKPMTLFQI QFLNAIGDLL BACU016977/1-509 KDDPFWRHTG YAMAQMDGLY VGATQRAIVE GTKPITLFQI QFLNAVGDLL ENSTTRP00000011799/1-549 KDDPFWRHTG YVMAQMDGLY VGAKKRATVE GTKPMTLFQI QFLNAVGDLL 201 250 bmy_01966T0/1-287 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020677/1-545 DLIPSLSPTK NSSLKFFKRW DMGHCSALIK VLPGFENIFF AHSSWYTYAA BACU016977/1-509 DLIPTLSPTK NSGLEVFKRW DMGHCSALIK VLPGFENIFF AHSSWYTYAA ENSTTRP00000011799/1-549 DLIPSLSPTK NSGLEAFKRW DMGHCSALIK VLPGFENIFF AHSSWYTYAA 251 300 bmy_01966T0/1-287 ---------- ---------- --------GF LESLDDFYLL SSGLVLLQTT ENSBTAP00000020677/1-545 MLRIYKHWDF NIVDKDTSSS RLSFSSYPGF LESLDDFYLL SSGLVLLQTT BACU016977/1-509 MLRIYKHWDF NIIDKDTSSS RLSFSSYPGF LESLDDFYLL SSGLVLLQTT ENSTTRP00000011799/1-549 MLRIYKHWDF NIIDKDTRSS RLSFSSYPGF LESLDDFYLL SSGLVLLQTT 301 350 bmy_01966T0/1-287 NSVYNKTLLQ HVVPQSLLAW QRVRVANMMA NGGKQWAEVF SKYNSGTYNN ENSBTAP00000020677/1-545 NSVYNKTLLQ HVVPQSLLAW QRVRVASMMA NNGKQWAEVF SKYNSGTYNN BACU016977/1-509 NSVYNKTLLQ HVVPQSLLAW QRVRVANMMA NGGKQWAEVF SKYNSGTYNN ENSTTRP00000011799/1-549 NSVYNKTLLQ HVVPKSLLAW QRVRVANMMA NGGKQWAEVF SKYNSGTYNN 351 400 bmy_01966T0/1-287 QYMVLDLKKV NLNYSLDKGT LYIVEQIPTY VEYSEQTDVL RTGYWPSYNI ENSBTAP00000020677/1-545 QYMVLDLKKV NLNHSLDEGT LYIVEQIPTY VEYSEQTAVL RRGYWPSYNI BACU016977/1-509 QYMVLDLKKV NLNYSLDKGT LYIVEQIPTY VEYSEQTDVL RTGYWPSYNI ENSTTRP00000011799/1-549 QYMVLDLKKV NLNYSLGKGT LYIVEQIPAY VEYSEQTDVL RTGYWPSYNI 401 450 bmy_01966T0/1-287 PFHEKIYNWS GYPMLVKKLG LDYSYDLASR AKIFRRDQGK VTDMESMKYI ENSBTAP00000020677/1-545 PFHEKVYNWS GYPILVKKLG LDYSYDLASR AKIFRRDQGK VTDMESMKYI BACU016977/1-509 PFHEKIYNWS GYPVLVKKLG LDYSYDLASR AKIFRRDQGK VTDMESMKYI ENSTTRP00000011799/1-549 PFHEKIYNWS GYPMLVKKLG LDYSYDLASR AKIFRRDQGK VTDMESMKYI 451 500 bmy_01966T0/1-287 MRYNKERTHV GYFFYPTVPN TDFLPRRKAA TKTTIIRKHF IFDEQYRVRF ENSBTAP00000020677/1-545 MRYNN----- ----YKQDPY SKGDPCNTVC CREDLNSHSP SPGGCYDTK- BACU016977/1-509 MRYNN----- ----YKNDTY SKGDPCNTIC CREDLNSLNP SPGGCYDTK- ENSTTRP00000011799/1-549 MRYNN----- ----YKNDTY SNGDPCNTIC CREDLNSLNP SPGGCYDTK- 501 550 bmy_01966T0/1-287 VADIYLASEY TAYAISGPTV QGGLPVFHWS RFNKTLHEGM PEAYNFDFIT ENSBTAP00000020677/1-545 VADIYLASKY KAYAISGPTV QGGLPVFHWS RFNKTLHEGM PEAYNFDFIT BACU016977/1-509 VADIYLASKY TAYAISGPTV QGGLPVFHWS RFNKTLHEGM PEAYNFDFIT ENSTTRP00000011799/1-549 VADIHLASAY TAYAISGPTV QGGLPVFHWS RFNKTLHEGM PEAYNFDFIT 551 600 bmy_01966T0/1-287 MKPIL----- ENSBTAP00000020677/1-545 MKPIL----- BACU016977/1-509 MKPIL----- ENSTTRP00000011799/1-549 MKPILLDMKW