KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:20 2014 Check: 00 .. Name: ENSP00000339245/1-727 Len: 783 Check: 3927 Weight: 1.00 Name: ENSBTAP00000020694/1-728 Len: 783 Check: 5566 Weight: 1.00 Name: BACU015721/1-744 Len: 783 Check: 737 Weight: 1.00 Name: ENSTTRP00000004801/1-727 Len: 783 Check: 1170 Weight: 1.00 Name: bmy_18794T0/1-768 Len: 783 Check: 1689 Weight: 1.00 // 1 50 ENSP00000339245/1-727 ---------- ---------- ---------- --------MA ADSREEKDGE ENSBTAP00000020694/1-728 ---------- ---------- ---------- --------MA ADSREEKDGE BACU015721/1-744 ---------- ---------- ---------- --------MA ADSREEKDGE ENSTTRP00000004801/1-727 ---------- ---------- ---------- --------MA ADSREEKDGE bmy_18794T0/1-768 DGLTDAPVLL LPRLRRPRES RRSGGGGGGG SSGNKRGAMA ADSREEKDGE 51 100 ENSP00000339245/1-727 LNVLDDILTE VPEQDDELYN PESEQDKNEK KGSKRKSDRM ESTDTKRQKP ENSBTAP00000020694/1-728 LNVLDDILTE VPEQDDELYN PESEQDKNEK KGSKRKSDRM ESADTKRQKP BACU015721/1-744 LNVLDDILTE VPEQDDELYN PESEQDKNEK KGSKRKSDRM ESTDTKRQKP ENSTTRP00000004801/1-727 LNVLDDILTE VPEQDDELYN PESEQDKNEK KGSKRKSDRM ESTDTKRQKP bmy_18794T0/1-768 LNVLDDILTE VPEQDDELYN PESEQDKNEK KGSKRKSDRM ESTDTKRQKP 101 150 ENSP00000339245/1-727 SVHSRQLVSK PLSSSVSNNK RIVSTKGKSA TEYKNEEYQR SERNKRL--- ENSBTAP00000020694/1-728 SVHSRQLISK PLSSSVNNNK RMVSTKGKSV TEYKNEEYQR SERNKRL--- BACU015721/1-744 SVHSRQLICK PLSSSVSNNK RMVSTKGKSV TEYKNEEYQR SERNKRKLIG ENSTTRP00000004801/1-727 SVHSRQLISK PLSSSVSNNK -MVSTKG-SV TEYKNEEYQR SERNKRL--- bmy_18794T0/1-768 SVHSRQLISK PLSSSVSNNK RMVSTKGKSV TEYKNEEYQR SERNKRL--- 151 200 ENSP00000339245/1-727 DADRKIRLSS SASREPYKNQ PEKTCVRKRD PERRAKSPTP DGSERIGLEV ENSBTAP00000020694/1-728 EADRKIRLSS SASREPYKSQ PDKTCLRKRD PERRVKSPTP DDSERIGLEV BACU015721/1-744 KFVRKIRLSS SASREPYKSQ PEKTCLRKRD PERRVKSPTP DGSERIGLEV ENSTTRP00000004801/1-727 EADRKIRLSS SASRESYKSQ SEKTCLRKRD PERRVKSPTP DGSERIGLEV bmy_18794T0/1-768 EADRKIRLSS SASREPYKSQ PEKTCLRKRD PERRVKSPTP DGSERIGLEV 201 250 ENSP00000339245/1-727 DRRASRSSQS SKEEVNSEEY GSDHETGSSG SSDEQGNNTE NEEEGVEEDV ENSBTAP00000020694/1-728 DRRASRSSQS SKEEVNSEEY GSDHETGSSG SSDEQGNNTE NEEEGV-EDV BACU015721/1-744 DRRASRSSQS SKEEVNSEEY GSDHETGSSG SSDEQGNNTE NEEEGV-EDV ENSTTRP00000004801/1-727 DRRASRSSQS SKEEVNSEEY GSDHETGSSG SSDEQGNNTE NEEEGV-EDV bmy_18794T0/1-768 DRRASRSSQS SKEEVNSEEY GSDHETGSSG SSDEQGNNTE NEEEGV-EDV 251 300 ENSP00000339245/1-727 EEDEEVEEDA EEDEEVDEDG ----EEEEEE EEEEEEEEEE EEEEYEQDER ENSBTAP00000020694/1-728 EEDEEVEEDA EEDEEVDEDG --EEEEEEEE EEEEEEEEEE EEEEYEQDER BACU015721/1-744 EEDEEVEDDA EEDEEVDDDG EEEEEEEEEE EEEEEEEEEE EEEEYEQDER ENSTTRP00000004801/1-727 EEDEEVEEDA EEDEEVDDDG EEEEEEEEEE EEEEEEEEEE EEEEYEQDER bmy_18794T0/1-768 EEDEEVEEDA EEDEEVDDDG EEEEEEEEEE EEEEEEEEEE EEEEYEQDER 301 350 ENSP00000339245/1-727 DQKEEGNDYD TRSEASDSGS ESVSFTDGSV RSGSGTDGSD EKKKERKRAR ENSBTAP00000020694/1-728 DQKEEGNDYD TRSEASDSDS ESVTFTDGSV RSGSGTDGSD EKKKERKRAR BACU015721/1-744 DQKEEGNDYD TRSEASDSDS ESVSFTDGSV RSGSGTDASD EKKKERKRAR ENSTTRP00000004801/1-727 DQKEEGNDYD TRSEASDSDS ESVSFTDGSV RSGSGTDGSD EKKKERKRAR bmy_18794T0/1-768 DQKEEGNDYD TRSEASDSDS ESVSFTDGSV RSGSGTDASD EKKKERKRAR 351 400 ENSP00000339245/1-727 GISPIVFDRS GSSASESYAG SEKKHEKLSS SVRAVRKDQT SKLKYVLQDA ENSBTAP00000020694/1-728 GISPIIFDRS GSSASESYAG SEKKHEKLSS SVRAVRKDQT SKLKYVLQDA BACU015721/1-744 GISPIVFDRS GSSASESYAG SEKKHEKLSS SVRAVRKDQT SKLKYVLQDA ENSTTRP00000004801/1-727 GISPIVFDRS GSSASESYAG SEKKHEKLSS SVRAVRKDQT SKLKYVLQDA bmy_18794T0/1-768 GISPIVFDRS GSSASESYAG SEKKHEKLSS SVRAVRKDQT SKLKYVLQDA 401 450 ENSP00000339245/1-727 RFFLIKSNNH ENVSLAKAKG VWSTLPVNEK KLNLAFRSAR SVILIFSVRE ENSBTAP00000020694/1-728 RFFLIKSNNH ENVSLAKAKG VWSTLPVNEK KLNVAFRSAR SVILIFSVRE BACU015721/1-744 RFFLIKSNNH ENVSLAKAKG VWSTLPVNEK KLNAAFRSAR SVILIFSVRE ENSTTRP00000004801/1-727 RFFLIKSINH EMLSLAKAKG VWSTLPVNEK KLNAAFRSAR SVILIFSVRE bmy_18794T0/1-768 RFFLIKSNNH ENVSLAKAKG VWSTLPVNEK KLNAAFRSAR SVILIFSVRE 451 500 ENSP00000339245/1-727 SGKFQGFARL SSESHHGGSP IHWVLPA--- GMSAKMLGGV FKIDWICRRE ENSBTAP00000020694/1-728 SGKFQGFARL SSESHHGGSP IHWVLPA--- GMSAKMLGGV FKIDWICRRE BACU015721/1-744 SGKFQGFARL SSESHHGGSP IHWVLPAXXX XXXAKMLGGV FKIDWICRRE ENSTTRP00000004801/1-727 SGKFQGFARL SSESHHGGSP IHWVLPA--- GMNAKMLGGV F-IDWICRRE bmy_18794T0/1-768 SGKFQGFARL SSESHHGGSP IHWVLPA--- GMNAKMLGGV FKIDWICRRE 501 550 ENSP00000339245/1-727 LPFTKSAHLT NPWNEHKPVK IGRDGQEIEL ECGTQLCLLF PPDESIDLYQ ENSBTAP00000020694/1-728 LPFTKSAHLT NPWNEHKPVK IGRDGQEIEL ECGTQLCLLF PPDESIDLYQ BACU015721/1-744 LPFTKSAHLT NPWNEHKPVK IGRDGQEIEL ECGTQLCLLF PPDESIDLYQ ENSTTRP00000004801/1-727 LPFTKSAHLT NPWNEHKPVK IGRDGQEIEL ECGTQLCLLF PPDESIDLYQ bmy_18794T0/1-768 LPFTKSAHLT NPWNEHKPVK IGRDGQEIEL ECGTQLCLLF PPDESIDLYQ 551 600 ENSP00000339245/1-727 VIHKMRHKRR MHSQPRSRGR PSRREPVRDV GRRRPEDYDI HNSRKKPRID ENSBTAP00000020694/1-728 VIHKMRHKRR MHSQPRSRGR PSRREPVRDV GRRRPEDYDI HNSRKKPRID BACU015721/1-744 VIHKMRHKRR MHSQPRSRGR PSRREPVRDV GRRRPEDYDI HNSRKKPRID ENSTTRP00000004801/1-727 VIHKMRHKRR MHSQPRSRGR PSRREPVRDV GRRRPEDYDI HNSRKKPRID bmy_18794T0/1-768 VIHKMRHKRR MHSQPRSRGR PSRREPVRDV GRRRPEDYDI HNSRKKPRID 601 650 ENSP00000339245/1-727 YPPEFHQRPG YLKDPRYQEV D--------R RFSGVRRDVF LNGSYNDYVR ENSBTAP00000020694/1-728 YAPEFHQRPG YLKDPRYQEV D--------R RFSGVRRDVF LNGSYNDYVR BACU015721/1-744 YAPEFHQRPG YLKDPRYQEV DSFTNLIPNR RFSGVRRDVF LNGSYNDYVR ENSTTRP00000004801/1-727 YAPEFHQRPG YLKDPRYQEV D--------R RFSGVRRDVF LNGSYNDYVR bmy_18794T0/1-768 YAPEFHQRPG YLKDPRYQEV D--------R RFSGVRRDVF LNGSYNDYVR 651 700 ENSP00000339245/1-727 EFHNMGPPPP WQGMPPYPGM EQPPHHPYYQ HHAPPPQAHP PYSGHHPVPH ENSBTAP00000020694/1-728 EFHNMGPPPP WQGMTPYPGM EQPPHHPYYQ HHAPPPQAHP PYSGHHPVPH BACU015721/1-744 EFHNMGPPPP WQGMTPYPGM EQPPHHPYYQ HHAPPPQAHP PYSGHHPVPH ENSTTRP00000004801/1-727 EFHNMGPPPP WQGMTPYPGM EQPPHHPYYQ HHAPPPQAHP PYSGHHPVPH bmy_18794T0/1-768 EFHNMGPPPP WQGMTPYPGM EQPPHHPYYQ HHAPPPQAHP PYSGHHPVPH 701 750 ENSP00000339245/1-727 EARYRDKRVH DYDMRVDDFL RRTQAVVSGR RSRPRERDRE RERDRPRDNR ENSBTAP00000020694/1-728 EARYRDKRVH DYDMRVDDFL RRTQAVVSGR RSRPRERDRE RERDRPRDNR BACU015721/1-744 EARYRDKRVH DYDMRVDDFL RRTQAVVSGR RSRPRERDRE RERDRPRDNR ENSTTRP00000004801/1-727 EARYRDKRVH DYDMRVDDFL RRTQAVVSGR RSRPRERDRE RERDRPRDNR bmy_18794T0/1-768 EARYRDKRVH DYDMRVDDFL RRTQAVVSGR RSRPRERDRE RERDRPRDNR 751 800 ENSP00000339245/1-727 RDRERDRGRD RERERERLCD RDRDRGERGR YRR ENSBTAP00000020694/1-728 RDRERDRGRD RERERERLCD RDRDRGERGR YRR BACU015721/1-744 RDRERDRGRD RERERERLCD RDRDRGERGR YRR ENSTTRP00000004801/1-727 RDRERDRGRD RERERERLCD RDRDRGERGR YRR bmy_18794T0/1-768 RDRERDRGRD RERERERLCD RDRDRGERGR YRR