KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:24 2014 Check: 00 .. Name: ENSTTRP00000010726/1-554 Len: 574 Check: 9981 Weight: 1.00 Name: ENSP00000380747/1-561 Len: 574 Check: 2995 Weight: 1.00 Name: bmy_08069T0/1-502 Len: 574 Check: 3104 Weight: 1.00 Name: BACU006801/1-452 Len: 574 Check: 1446 Weight: 1.00 Name: ENSBTAP00000020713/1-560 Len: 574 Check: 1726 Weight: 1.00 // 1 50 ENSTTRP00000010726/1-554 ---------- ----MQGEPN PSASLIDRTI KMRKETEARK VVLAWGLLNV ENSP00000380747/1-561 ---------- ---MMQGEAH PSASLIDRTI KMRKETEARK VVLAWGLLNV bmy_08069T0/1-502 MKGANVEPRK VSELMQGEPN PSASLIDRTI KMRKETEARK VVLAWGLLNV BACU006801/1-452 ---------- ----MQGEPN PSASLIDRTI KMRKETEARK VVLAWGLLNV ENSBTAP00000020713/1-560 ---------- ----MQGEPN PSASLIDRTI KMRRETEARK VVLAWGLLNV 51 100 ENSTTRP00000010726/1-554 SMAGMIYTEM TGRMCSLYYN VRYWPLWYIE LALGFLFSLN ALFDFWRYFK ENSP00000380747/1-561 SMAGMIYTEM TGKLISSYYN VTYWPLWYIE LALASLFSLN ALFDFWRYFK bmy_08069T0/1-502 SMAGMIYTEM TGKLISSYYN VTHWPLWYIE LALASLFSLN ALFDFWRYFK BACU006801/1-452 SMAGMIYTEM TGKLISSYYN VTHWPLWYIE LALASLFSLN ALFDFWRYFK ENSBTAP00000020713/1-560 SMAGMIYTEM TGKLISSYYN VTYWPLWYIE LALASLFSLN ALFDFWRYFK 101 150 ENSTTRP00000010726/1-554 YTVAPTSLVV SPGQQTLLGL KTAVVQTTPP RDLAAPQIPP SPPSPSIQGQ ENSP00000380747/1-561 YTVAPTSLVV SPGQQTLLGL KTAVVQTTPP HDLAATQIPP APPSPSIQGQ bmy_08069T0/1-502 YTVAPTSLVV SPGQQTLLGL KTAVEKNCQC TGLAS----- ---------- BACU006801/1-452 YTVAPTSLVV SPGQQTLLGL KTAVVQTAPP RDLAAPQIPP SPPSPSIQGQ ENSBTAP00000020713/1-560 CTVAATSLVV SPEQQTLLGL KTAVVQTTPP RDLAAAQIPP SPPSPSIQGQ 151 200 ENSTTRP00000010726/1-554 SVLSYSPSRS PSTSPKFTTS CITGYSPQLQ GLSSGGSGSY SPGVTYSPIS ENSP00000380747/1-561 SVLSYSPSRS PSTSPKFTTS CMTGYSPQLQ GLSSGGSGSY SPGVTYSPVS bmy_08069T0/1-502 ----YSPS-- ---------- ---------- ---------- ---------- BACU006801/1-452 SVLSYSPSRS PSTSPKFTTS CITGYSPQLQ ---------- ---------- ENSBTAP00000020713/1-560 SVLSYSPSRS PSTSPKFTTS CITGYSPQLQ GLSSGGSGSY SPGVTYSPIS 201 250 ENSTTRP00000010726/1-554 GYNKLASYSP SPSSPYPTTV GPVENSGLRS RYRSSPTVYN SPTDKEDYMT ENSP00000380747/1-561 GYNKLASFSP SPPSPYPTTV GPVESSGLRS RYRSSPTVYN SPTDKEDYMT bmy_08069T0/1-502 ---------- -PSSPYPTTV GPVENSGLRS RYRSSPTVYN SPTDKEDYMT BACU006801/1-452 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020713/1-560 GYNKLASYSP SPPPPYPTTV GPVESSGLRS RYRSSPTVYN SPTDKEDYMT 251 300 ENSTTRP00000010726/1-554 DLRTLDTFLR SEEEKQHRVK LGSPDSTSPS TSPTFWNHSR FMGDYAQTLK ENSP00000380747/1-561 DLRTLDTFLR SEEEKQHRVK LGSPDSTSPS SSPTFWNYSR SMGDYAQTLK bmy_08069T0/1-502 DLRTLDTFLR SEEEKQHRVK LGSPDSTSPS TSPTFWNYSR SVGDYAQTLK BACU006801/1-452 ---------- ---------- -GSPDSTSPS TSPTFWNYSR SVGDYAQTLK ENSBTAP00000020713/1-560 DLRTLDTFLR SEEEKQQRVK LGSPDSTSPP TSPTFWNYSR SVGDYAQTLK 301 350 ENSTTRP00000010726/1-554 KFQYQLACRS QAPCANKDEA DLSSKQAAEE ------MNRQ LLDHMDSWTA ENSP00000380747/1-561 KFQYQLACRS QAPCANKDEA DLSSKQAAEE VWARVAMNRQ LLDHMDSWTA bmy_08069T0/1-502 KFQYQLACRS QAPCANKDEA DLSSKQAAEE VWARVTMNRQ LLDHMDSWTA BACU006801/1-452 KFQYQLACRS QAPCANKDEA DLSSKQAAEE VWARVTMNRQ LLDHMDSWTA ENSBTAP00000020713/1-560 KFQYQLACRS QAPCANKDEA DLSSKQAAEE VWARVTMNRQ LLDHMDSWTA 351 400 ENSTTRP00000010726/1-554 KFRNWINETI LVPLVQEIES VSTQMRRMGC PELQIGEASI TSLKQAALVK ENSP00000380747/1-561 KFRNWINETI LVPLVQEIES VSTQMRRMGC PELQIGEASI TSLKQAALVK bmy_08069T0/1-502 KFRNWINETI LVPLVQEIES VSTQMRRMGC PELQIGEASI TSLKQAALVK BACU006801/1-452 KFRNWINETI LVPLVQEIES VSTQMRRMGC PELQIGEASI TSLKQAALVK ENSBTAP00000020713/1-560 KFRNWINETI LVPLVQEIES VSTQMRRMGC PELQIGEASI TSLKQAALVK 401 450 ENSTTRP00000010726/1-554 APLIPTLNTI VQYLDLTPNQ EYLFERIKEL SQGGCMSSFR WNRGGDFKGR ENSP00000380747/1-561 APLIPTLNTI VQYLDLTPNQ EYLFERIKEL SQGGCMSSFR WNRGGDFKGR bmy_08069T0/1-502 APLIPTLNTI VQYLDLTPNQ EYLFERIKEL SQGGCMSSFR WNRGGDFKGR BACU006801/1-452 APLIPTLNTI VQYLDLTPNQ EYLFERIKEL SQGGCMSSFR WNRGGDFKGR ENSBTAP00000020713/1-560 APLIPTLNTI VQYLDLTPNQ EYLFERIKEL SQGGCMSSFR WNRGGDFKGR 451 500 ENSTTRP00000010726/1-554 KWDTDLPTDS AIIMHVFCTY LDSRLPPHPK YPDGKTFTSQ HFVQTPNKPD ENSP00000380747/1-561 KWDTDLPTDS AIIMHVFCTY LDSRLPPHPK YPDGKTFTSQ HFVQTPNKPD bmy_08069T0/1-502 KWDTDLPTDS AIIMHVFCTY LDSRLPPHPK YPDGKTFTSQ HFVQTPNKPD BACU006801/1-452 KWDTDLPTDS AIIMHVFCTY LDSRLPPHPK YPDGKTFTSQ HFVQTPNKPD ENSBTAP00000020713/1-560 KWDTDLPTDS AIIMHVFCTY LDSRLPPHPK YPDGKTFTSQ HFVQTPNKPD 501 550 ENSTTRP00000010726/1-554 VTNENVFCIY QSAINPPHYE LIYQRHFYSL PKGRNNMFHT LLMFLYIIKT ENSP00000380747/1-561 VTNENVFCIY QSAINPPHYE LIYQRHVYNL PKGRNNMFHT LLMFLYIIKT bmy_08069T0/1-502 VTNENVFCIY QSAINPPHYE LIYQRHVYSL PKGRNNMFHT LLMFLYIIKT BACU006801/1-452 VTNENVFCIY QSAINPPHYE LIYQRHVYSL PKGRNNMFHT LLMFLYIIKT ENSBTAP00000020713/1-560 VTNENVFCIY QSAINPPHYE LIYQRHVYNL PKGRNNMFHT LLMFLYIIKT 551 600 ENSTTRP00000010726/1-554 KESGMLGRVN LGLSGVNILW IFGE ENSP00000380747/1-561 KESGMLGRVN LGLSGVNILW IFGE bmy_08069T0/1-502 KESGMLGRVN LGLSGVNILW IFGE BACU006801/1-452 KESGMLG--- ---------- ---- ENSBTAP00000020713/1-560 KESGMLGRVN LGLSGVNILW IFGE