KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:26 2014 Check: 00 .. Name: BACU000880/1-1044 Len: 1069 Check: 7762 Weight: 1.00 Name: bmy_01180T0/1-598 Len: 1069 Check: 5038 Weight: 1.00 Name: ENSBTAP00000020715/1-734 Len: 1069 Check: 3366 Weight: 1.00 Name: ENSP00000216122/1-734 Len: 1069 Check: 6042 Weight: 1.00 Name: ENSTTRP00000006946/1-734 Len: 1069 Check: 8520 Weight: 1.00 // 1 50 BACU000880/1-1044 MELEDQTGAV RDLQLWEPWF FICEVGVLIA AGRTEVPSPA CGVGNSSMPQ bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- ---------- ---------- ---------- ENSP00000216122/1-734 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006946/1-734 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000880/1-1044 DLSEALKEAT KEVHTLAENA EFMKNFQKGE VTREGFKLIM ASLYHIYVAL bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- ---------- ---------- ---------- ENSP00000216122/1-734 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006946/1-734 ---------- ---------- ---------- ---------- ---------- 101 150 BACU000880/1-1044 EEEIEHNKEN AVYAPLYFPE ELHRRGALEQ DMAFWYGSRW QEAIPYTQAT bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- ---------- ---------- ---------- ENSP00000216122/1-734 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006946/1-734 ---------- ---------- ---------- ---------- ---------- 151 200 BACU000880/1-1044 RRYVQRLQEV GRAEPELLVA HTYTRYLGDL SGGQVLKKIA QKALDLPSSG bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 --------MS GFDDP----- ---------- ---------- ---------- ENSP00000216122/1-734 --------MS GFDDP----- ---------- ---------- ---------- ENSTTRP00000006946/1-734 --------MS GFDDP----- ---------- ---------- ---------- 201 250 BACU000880/1-1044 EGLAFFTFPN VGSATKFKQL YRSRMNTLEM TPEVRKRVLD EAKTAFLLNI bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- ---------- ---------- ---------- ENSP00000216122/1-734 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006946/1-734 ---------- ---------- ---------- ---------- ---------- 251 300 BACU000880/1-1044 QLFEELQGLL TQDAKDQSPS RAPDLRRRAG SRAQDSAPTE ASRGKPQLSI bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- ---------- ---------- ---------- ENSP00000216122/1-734 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006946/1-734 ---------- ---------- ---------- ---------- ---------- 301 350 BACU000880/1-1044 LSQVPLMRWV LMFSFLVATV AVGLYTIDSF GGDNAADEGQ ARKSQLQRRF bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 ---------- ---------- --GIFYSDSF GGDNAADEGQ ARKSQLQRRF ENSP00000216122/1-734 ---------- ---------- --GIFYSDSF GGDAQADEGQ ARKSQLQRRF ENSTTRP00000006946/1-734 ---------- ---------- --GIFYSDSF GGDNAADEGQ ARKSQLQRRF 351 400 BACU000880/1-1044 KEFLRQYRVG TDRTGFTFKY RDELKRHYNL GEYWIEVEME DLASFDEDLA bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 KEFLRQYRVG TDRTGFTFKY RDELKRHYNL GEYWIEVEME DLASFDEELA ENSP00000216122/1-734 KEFLRQYRVG TDRTGFTFKY RDELKRHYNL GEYWIEVEME DLASFDEDLA ENSTTRP00000006946/1-734 KEFLRQYRVG TDRTGFTFKY RDELKRHYNL GEYWIEVEME DLASFDEDLA 401 450 BACU000880/1-1044 DYLYKQPAEH LQLLEEAAKE VADEVTRPRP AGDEVLQDIQ VMLKSDASPS bmy_01180T0/1-598 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020715/1-734 DYLYKQPAEH LQLLEEAAKE VADEVTRPRP AGDEVLQDIQ VMLKSDASPS ENSP00000216122/1-734 DYLYKQPAEH LQLLEEAAKE VADEVTRPRP SGEEVLQDIQ VMLKSDASPS ENSTTRP00000006946/1-734 DYLYKQPAEH LQLLEEAAKE VADEVTRPRP AGDEVLQDIQ VMLKSDASPS 451 500 BACU000880/1-1044 SIRSLKSDTM SHLVKIPGII ISASGVRAKA TRISVQCRSC RNTLTNVAMR bmy_01180T0/1-598 ---------M SHLVKIPGII IAASGVRAKA TRISVQCRSC RNTLTNVAMR ENSBTAP00000020715/1-734 SIRSLKSDTM SHLVKIPGIV IAASGVRAKA TRISIQCRSC HSTLTNIAMR ENSP00000216122/1-734 SIRSLKSDMM SHLVKIPGII IAASAVRAKA TRISIQCRSC RNTLTNIAMR ENSTTRP00000006946/1-734 SIRSLKSDTM SHLVKIPGII IAASGVRAKA TRISVQCRSC RNTLTNVAMR 501 550 BACU000880/1-1044 PGLEGYALPR KCNTDQAGRP KCPLDPYFIM PDKCKCVDFQ TLKLQELPDA bmy_01180T0/1-598 PGLEGYALPR KCNTDQAGRP KCPLDPYFIM PDKCKCVDFQ TLKLQELPDA ENSBTAP00000020715/1-734 PGLEGYALPR KCNTDQAGRP KCPLDPYFIM PDKCKCVDFQ TLKLQELPDA ENSP00000216122/1-734 PGLEGYALPR KCNTDQAGRP KCPLDPYFIM PDKCKCVDFQ TLKLQELPDA ENSTTRP00000006946/1-734 PGLEGYALPR KCNTDQAGRP KCPLDPYFIM PDKCKCVDFQ TLKLQELPDA 551 600 BACU000880/1-1044 VPHGEMPRHM QLYCDRYLCD KVVPGNRVTI MGIYSIKKFG LTASRGRDRV bmy_01180T0/1-598 VPHGEMPRHM QLYCDRYLCD KVVPGNRVTI MGIYSIKKFG LTASRGRDR- ENSBTAP00000020715/1-734 VPHGEMPRHM QLYCDRYLCD KVVPGNRVTI MGIYSIKKFG LTSNRGRDRV ENSP00000216122/1-734 VPHGEMPRHM QLYCDRYLCD KVVPGNRVTI MGIYSIKKFG LTTSRGRDRV ENSTTRP00000006946/1-734 VPHGEMPRHM QLYCDRYLCD KVVPGNRVTI MGIYSIKKFG LTTSRGRDRV 601 650 BACU000880/1-1044 GVGIRSAYIR VLGIQVDTDG SSRSFAGAVT PQEEEEFRRL AALPNVYEVI bmy_01180T0/1-598 GAHAPPSSAR ---------- PGRSFAGAVT PQEEEEFRRL AALPNVYEVI ENSBTAP00000020715/1-734 GVGIRSAYIR VLGIQVDTDG SGRTFAGAMT PQEEEEFRRL AALPNIYELI ENSP00000216122/1-734 GVGIRSSYIR VLGIQVDTDG SGRSFAGAVS PQEEEEFRRL AALPNVYEVI ENSTTRP00000006946/1-734 GVGIRSAYIR VLGIQVDTDG SSRSFAGAVT PQEEEEFRRL AALPSVYEVV 651 700 BACU000880/1-1044 SKSIAPSIFG GTDMKKAIAC LLFGGSRKRL PDGLTRRGDI NLLMLGDPGT bmy_01180T0/1-598 SKSIAPSIFG GTDMKKAIAC LLFGGSRKRL PDGLTRRGDI NLLMLGDPGT ENSBTAP00000020715/1-734 SKSIAPSIFG GTDMKKAIAC LLFGGSRKRL PDGLTRRGDI NLLMLGDPGT ENSP00000216122/1-734 SKSIAPSIFG GTDMKKAIAC LLFGGSRKRL PDGLTRRGDI NLLMLGDPGT ENSTTRP00000006946/1-734 SKSIAPSIFG GTDMKKAIAC LLFGGSRKRL PDGLTRRGDI NLLMLGDPGT 701 750 BACU000880/1-1044 AKSQLLKFVE KCSPIGVYTS GKGSSAAGLT ASVMRDPSSR NFIMEGGAMV bmy_01180T0/1-598 AKSQLLKFVE KCSPIGVYTS GKGSSAAGLT ASVMRDPSSR NFIMEGGAMV ENSBTAP00000020715/1-734 AKSQLLKFVE KCSPIGVYTS GKGSSAAGLT ASVMRDPSSR NFIMEGGAMV ENSP00000216122/1-734 AKSQLLKFVE KCSPIGVYTS GKGSSAAGLT ASVMRDPSSR NFIMEGGAMV ENSTTRP00000006946/1-734 AKSQLLKFVE KCSPIGVYTS GKGSSAAGLT ASVMRDPSSR NFIMEGGAMV 751 800 BACU000880/1-1044 LADGGVVCID EFDKMREDDR VAIHEAMEQQ TISIAKAGIT TTLNSRCSVL bmy_01180T0/1-598 LADGGVVCID EFDKMREDDR VAIHEAMEQQ TISIAKAGIT TTLNSRCSVL ENSBTAP00000020715/1-734 LADGGVVCID EFDKMREDDR VAIHEAMEQQ TISIAKAGIT TTLNSRCSVL ENSP00000216122/1-734 LADGGVVCID EFDKMREDDR VAIHEAMEQQ TISIAKAGIT TTLNSRCSVL ENSTTRP00000006946/1-734 LADGGVVCID EFDKMREDDR VAIHEAMEQQ TISIAKAGIT TTLNSRCSVL 801 850 BACU000880/1-1044 AAANSVFGRW DETKGEDNID FMPTILSRFD MIFIVKDEHN EERDM----- bmy_01180T0/1-598 AAANSVFGRW DETKGEDNID FMPTILSRFD MIFIVKDEHN EERDMVRGGP ENSBTAP00000020715/1-734 AAANSVFGRW DETKGEDNID FMPTILSRFD MIFIVKDEHN EERDV----- ENSP00000216122/1-734 AAANSVFGRW DETKGEDNID FMPTILSRFD MIFIVKDEHN EERDV----- ENSTTRP00000006946/1-734 AAANSVFGRW DETKGEDNID FMPTILSRFD MIFIVKDEHN EERDM----- 851 900 BACU000880/1-1044 ---------- ----MLAKHV ITLHVSALTQ TQAVEGEIDL TKLKKFIAYC bmy_01180T0/1-598 DSSQARGSGG RGARMLAKHV ITLHVSALTQ TQAVEGEIDL TKLKKFIAYC ENSBTAP00000020715/1-734 ---------- ----MLAKHV ITLHVSALTQ AQAVEGEIDL AKLKKFIAYC ENSP00000216122/1-734 ---------- ----MLAKHV ITLHVSALTQ TQAVEGEIDL AKLKKFIAYC ENSTTRP00000006946/1-734 ---------- ----MLAKHV ITLHVSALTQ TQAVEGEIDL TKLKKFIAYC 901 950 BACU000880/1-1044 RAKCGPRLSA GAAEKLKNRY IIMRSGARQH ERDSDRRSSI PITVRQLEAI bmy_01180T0/1-598 RAKCGPRLSA GAAEKLKNRY IIMRSGARQH ERDSDRRSSI PITVRQLEAI ENSBTAP00000020715/1-734 RAKCGPRLSA EAAEKLKNRY IIMRSGARQH ERDSDRRSSI PITVRQLEAI ENSP00000216122/1-734 RVKCGPRLSA EAAEKLKNRY IIMRSGARQH ERDSDRRSSI PITVRQLEAI ENSTTRP00000006946/1-734 RAKCGPRLSA EAAEKLKNRY IIMRSGARQH ERDSDRRSSI PITVRQLEAV 951 1000 BACU000880/1-1044 VRIAEALSKM KLQPFATEAD VEEALRLFQV STLDAALSGT LSGVEGFTSQ bmy_01180T0/1-598 VRIAEALSKM KLQPFAMEAD VEEALRLFQV STLDAALSGT LSGVEGFTSQ ENSBTAP00000020715/1-734 VRIAEALSKM KLQPFATEAD VEEALRLFQV STLDAALSGT LSGVEGFTSQ ENSP00000216122/1-734 VRIAEALSKM KLQPFATEAD VEEALRLFQV STLDAALSGT LSGVEGFTSQ ENSTTRP00000006946/1-734 VRIAEALSKM KLQPFATEAD VEEALRLFQV STLDAALSGT LSGVEGFTSQ 1001 1050 BACU000880/1-1044 EDQELLSRIE KQLKRRFAIG SQVSEHSIIQ DFTKQ--PET LVFAAFIA-- bmy_01180T0/1-598 EDQELLSRIE KQLKRRFAIG SQVSEHSIVQ DFTKQKYPEH AIHKVLQLML ENSBTAP00000020715/1-734 EDQELLSRIE KQLKRRFAIG SQVSEHSIIQ DFTKQKYPEH AIHKVLQLML ENSP00000216122/1-734 EDQEMLSRIE KQLKRRFAIG SQVSEHSIIK DFTKQKYPEH AIHKVLQLML ENSTTRP00000006946/1-734 EDQELLSRIE KQLKRRFAIG SQVSEHSIIQ DFTKQKYPEH AIHKVLQLML 1051 1100 BACU000880/1-1044 --GPILLFLC LRSVGALTL bmy_01180T0/1-598 RRGEIQHRMQ RKVLYRLK- ENSBTAP00000020715/1-734 RRGEIQHRMQ RKVLYRLK- ENSP00000216122/1-734 RRGEIQHRMQ RKVLYRLK- ENSTTRP00000006946/1-734 RRGEIQHRMQ RKVLYRLK-