KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:27 2014 Check: 00 .. Name: ENSTTRP00000012232/1-837 Len: 1070 Check: 5220 Weight: 1.00 Name: BACU002140/1-1067 Len: 1070 Check: 6061 Weight: 1.00 Name: ENSP00000393978/1-878 Len: 1070 Check: 6538 Weight: 1.00 Name: bmy_06589T0/1-878 Len: 1070 Check: 3773 Weight: 1.00 Name: ENSBTAP00000020721/1-879 Len: 1070 Check: 923 Weight: 1.00 // 1 50 ENSTTRP00000012232/1-837 MAAAPSHPA- GLPGSPGPGS PPPSGSLELQ APPPLLSHVP APGSGVSFHI BACU002140/1-1067 MAAAPSHPA- GLPGSPGPGS PPPSGSLELQ APPPLLPHVP APGSGVSFHI ENSP00000393978/1-878 MATAPSYPA- GLPGSPGPGS PPPPGGLELQ SPPPLLPQIP APGSGVSFHI bmy_06589T0/1-878 MAAAPSHPA- GLPGSPGPGS PPPSGSLELQ APPPLLHHVP APGSGVSFHI ENSBTAP00000020721/1-879 SSWIPGIPAY KIPGIHGPGS PSPSGGLELQ SPPPLLPQVP APGSGVSFHI 51 100 ENSTTRP00000012232/1-837 QIGLTREFVL LPTASELAHV KQLACSIVDQ KFPECGFYGL YDKILLFKHD BACU002140/1-1067 QIGLTREFVL LPTASELAHV KQLACSIVDQ KFPECGFYGL YDKILLFRHD ENSP00000393978/1-878 QIGLTREFVL LPAASELAHV KQLACSIVDQ KFPECGFYGL YDKILLFKHD bmy_06589T0/1-878 QIGLTREFVL LPTASELAHV KQLACSIVDQ KFPECGFYGL YDKILLFKHD ENSBTAP00000020721/1-879 QIGLTREFVL LPAASELAHV KQLACSIVDQ KFPECGFYGL YDKILLFKHD 101 150 ENSTTRP00000012232/1-837 PTSANLLQLV RSAGDIQEGD LVEVVLSASA TFEDFQIRPH ALTVHSYRAP BACU002140/1-1067 PTSANLLQLV RSAGDIQEGD LVEVVLSASA TFEDFQIRPH ALTVHSYRAP ENSP00000393978/1-878 PTSANLLQLV RSSGDIQEGD LVEVVLSASA TFEDFQIRPH ALTVHSYRAP bmy_06589T0/1-878 PTSANLLQLV RSAGDIQEGD LVEVVLSASA TFEDFQIRPH ALTVHSYRAP ENSBTAP00000020721/1-879 PTSANLLQLV RSAGDIQEGD LVEVVLSASA TFEDFQIRPH ALTVHSYRAP 151 200 ENSTTRP00000012232/1-837 AFCDHCGEML FGLVRQGLKC EG-------- ---------- ---------- BACU002140/1-1067 AFCDHCGEML FGLVRQGLKC DAAIDIAIVH MPYPTLEVLV YVTVVVEQPW ENSP00000393978/1-878 AFCDHCGEML FGLVRQGLKC DG-------- ---------- ---------- bmy_06589T0/1-878 AFCDHCGEML FGLVRQGLKC DG-------- ---------- ---------- ENSBTAP00000020721/1-879 AFCDHCGEML FGLVRQGLKC DG-------- ---------- ---------- 201 250 ENSTTRP00000012232/1-837 ---------- ---------- ---------- ---------- ---------- BACU002140/1-1067 YHQVLMAILR MDFIGPASQM MVQVHRVPKE AQMPVLYAID TFLREFGSTL ENSP00000393978/1-878 ---------- ---------- ---------- ---------- ---------- bmy_06589T0/1-878 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020721/1-879 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000012232/1-837 ---------- -------CGL NYHKRCAFSI PNNCSGARKR RLSSTSLASG BACU002140/1-1067 ILITGPIDEI LKFCEACCGL NYHKRCAFSI PNNCSGARKR RLSSTSLASG ENSP00000393978/1-878 ---------- -------CGL NYHKRCAFSI PNNCSGARKR RLSSTSLASG bmy_06589T0/1-878 ---------- -------CGL NYHKRCAFSI PNNCSGARKR RLSSTSLASG ENSBTAP00000020721/1-879 ---------- -------CGL NYHKRCAFSI PNNCSGARKR RLSSTSLASS 301 350 ENSTTRP00000012232/1-837 HSVRLGTSES LLSMTDELSR STTELIPRRP TSSSSSSSVS SYTGRPIELD BACU002140/1-1067 HSVRLGTSES LLSMADELSR STTELIPRRP PSSSSSSSAS SYTGRPIELD ENSP00000393978/1-878 HSVRLGTSES LPCTAEELSR STTELLPRRP PSSSSSSSAS SYTGRPIELD bmy_06589T0/1-878 HSVRLGTSES LLSMADELSR STTELIPRRP PSSSYSSSAS SYTGRPIELD ENSBTAP00000020721/1-879 HSVRLGTSES LLSMTDELSR STTELVPRRP PSSSSSSSAS SYTGRPIELD 351 400 ENSTTRP00000012232/1-837 KMLLSKVKVP HTFLIHSYTR PTVCQACKKL LKGLFRQGLQ CKDCKFNCHK BACU002140/1-1067 KMLLSKVKVP HTFLIHSYTR PTVCQACKKL LKGLFRQGLQ CKDCKFNCHK ENSP00000393978/1-878 KMLLSKVKVP HTFLIHSYTR PTVCQACKKL LKGLFRQGLQ CKDCKFNCHK bmy_06589T0/1-878 KMLLSKVKVP HTFLIHSYTR PTVCQACKKL LKGLFRQGLQ CKDCKFNCHK ENSBTAP00000020721/1-879 KMLLSKVKVP HTFLIHSYTR PTVCQACKKL LKGLFRQGLQ CKDCKFNCHK 401 450 ENSTTRP00000012232/1-837 RCATRVPNDC LGEALINGDV PMEEATDFSE ADKSSLMDES DDSGFVPGSH BACU002140/1-1067 RCATRVPNDC LGEALINGDV PMEEATDFSE ADKSSLMDES DDSGFVPGSH ENSP00000393978/1-878 RCATRVPNDC LGEALINGDV PMEEATDFSE ADKSALMDES EDSGVIPGSH bmy_06589T0/1-878 RCATRVPNDC LGEALINGDV PMEEATDFSE ADKSSLMDES DDSGFVPGSH ENSBTAP00000020721/1-879 RCATRVPNDC LGEALINGDV PMEEATDFSE ADKSSLTDEP DDSGFIPGSH 451 500 ENSTTRP00000012232/1-837 SENALHASEE EEGEGGKAQX XXXXXXXXXX XXXXXXXXXX XXXXXX---- BACU002140/1-1067 SENALHASEE EEGEGGKAQS TTELIP--RR PPSSSSSSSA SSYTGRPIEL ENSP00000393978/1-878 SENALHASEE EEGEGGKAQS SLGYIPLMRV VQSVRHTTRK SSTTLR---- bmy_06589T0/1-878 SENALHASEE EEGEGGKAQS SLGYIPLMRV VQSVRHTTRK SSTTLR---- ENSBTAP00000020721/1-879 SENALHASEE EEGEGGKSES SLGYIPLMRV VQSVRHTTRK SSTTLR---- 501 550 ENSTTRP00000012232/1-837 ---------- -XXXXXXXXX XXXX------ ---------- ---------R BACU002140/1-1067 DKMLLSKVKV PHTFLIHSYT RPTVCQACKK LLKGLFRQGL QCKDCKFNCH ENSP00000393978/1-878 ---------- -EGWVVHYSN KDTL------ ---------- ---------R bmy_06589T0/1-878 ---------- -EGWVVHYSN KDTL------ ---------- ---------R ENSBTAP00000020721/1-879 ---------- -EGWVVHYSN KDTL------ ---------- ---------R 551 600 ENSTTRP00000012232/1-837 KRHYWRLDCK CI-------- ---------- -----TLFQN NTTNRYYK-- BACU002140/1-1067 KRCATRVPND CLGEALINGD VPMEEATDFS EADKSSLMDE SDDSGFVPGS ENSP00000393978/1-878 KRHYWRLDCK CI-------- ---------- -----TLFQN NTTNRYYK-- bmy_06589T0/1-878 KRHYWRLDCK CI-------- ---------- -----TLFQN NTTNRYYK-- ENSBTAP00000020721/1-879 KRHYWRLDCK CI-------- ---------- -----TLFQN NTTNRYYK-- 601 650 ENSTTRP00000012232/1-837 ---------- ---------- ---------- -EIPLSEILA VEPAQNFSLV BACU002140/1-1067 HSENALHASE EEEGEGGKAQ RAPSASFLVS YEIPLSEILA VEPAQNFSLV ENSP00000393978/1-878 ---------- ---------- ---------- -EIPLSEILT VESAQNFSLV bmy_06589T0/1-878 ---------- ---------- ---------- -EIPLSEILA VEPAQNFSLV ENSBTAP00000020721/1-879 ---------- ---------- ---------- -EIPLSEILT VEPAQNFSLV 651 700 ENSTTRP00000012232/1-837 PPGTNPHCFE IVTANTTYFV GETPGGAPGG PSGQGAETAR GWETAIRQAL BACU002140/1-1067 PPGTNPHCFE IVTANTTYFV GETPGGAPGG PSGQGAETAR GWETAIRQAL ENSP00000393978/1-878 PPGTNPHCFE IVTANATYFV GEMPGGTPGG PSGQGAEAAR GWETAIRQAL bmy_06589T0/1-878 PPGTNPHCFE IVTANTTYFV GETPGGAPGG PSGQGAETAR GWETAIRQAL ENSBTAP00000020721/1-879 PPGTNPHCFE IVTANATYFV GETPGGAPGG PSGQGAETAR GWETAIRQAL 701 750 ENSTTRP00000012232/1-837 MPVILQDAPS APGHAPHRQA SLSISVSNSQ IPENVXXXXX XXXXXXXXXX BACU002140/1-1067 MPVILQDAPS APGHAPHRQA SLSISVSNSQ IQENVDIATV YQIFPDEVLG ENSP00000393978/1-878 MPVILQDAPS APGHAPHRQA SLSISVSNSQ IQENVDIATV YQIFPDEVLG bmy_06589T0/1-878 MPVILQDAPS APGHAPHRQA SLSISVSNSQ IQENVDIATV YQIFPDEVLG ENSBTAP00000020721/1-879 MPVILQDAPS APGHAPHRQA SLSISVSNSQ IQENVDIATV YQIFPDEVLG 751 800 ENSTTRP00000012232/1-837 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSLRHP BACU002140/1-1067 SGQFGVVYGG KHRKTGRDVA VKVIDKLRFP TKQESQLRNE VAILQSLRHP ENSP00000393978/1-878 SGQFGVVYGG KHRKTGRDVA VKVIDKLRFP TKQESQLRNE VAILQSLRHP bmy_06589T0/1-878 SGQFGVVYGG KHRKTGRDVA VKVIDKLRFP TKQESQLRNE VAILQSLRHP ENSBTAP00000020721/1-879 SGQFGVVYGG KHRKTGRDVA VKVIDKLRFP TKQESQLRNE VAILQSLRHP 801 850 ENSTTRP00000012232/1-837 GIVNLECMFE TPEKVFVVME KLHGDMLEMI LSSEKGRLPE RLTKFLITQI BACU002140/1-1067 GIVNLECMFE TPEKVFVVME KLHGDMLEMI LSSEKGRLPE RLTKFLITQI ENSP00000393978/1-878 GIVNLECMFE TPEKVFVVME KLHGDMLEMI LSSEKGRLPE RLTKFLITQI bmy_06589T0/1-878 GIVNLECMFE TPEKVFVVME KLHGDMLEMI LSSEKGRLPE RLTKFLITQI ENSBTAP00000020721/1-879 GIVNLECMFE TPEKVFVVME KLHGDMLEMI LSSEKGRLPE RLTKFLITQI 851 900 ENSTTRP00000012232/1-837 LVXXXXXXXX XXXXCDLKPE NVLLASADPF PQVKLCDFGF ARIIGEKSFR BACU002140/1-1067 LVALRHLHFK NIVHCDLKPE NVLLASADPF PQVKLCDFGF ARIIGEKSFR ENSP00000393978/1-878 LVALRHLHFK NIVHCDLKPE NVLLASADPF PQVKLCDFGF ARIIGEKSFR bmy_06589T0/1-878 LVALRHLHFK NIVHCDLKPE NVLLASADPF PQVKLCDFGF ARIIGEKSFR ENSBTAP00000020721/1-879 LVALRHLHFK NIVHCDLKPE NVLLSSADPF PQVKLCDFGF ARIIGEKSFR 901 950 ENSTTRP00000012232/1-837 RSVVGTPAYL APEVLLNQGY NRSLDMWSVG VIMYVSLSGT FPFNEDEDIK BACU002140/1-1067 RSVVGTPAYL APEVLLNQGY NRSLDMWSVG VIMYVSLSGT FPFNEDEDIK ENSP00000393978/1-878 RSVVGTPAYL APEVLLNQGY NRSLDMWSVG VIMYVSLSGT FPFNEDEDIN bmy_06589T0/1-878 RSVVGTPAYL APEVLLNQGY NRSLDMWSVG VIMYVSLSGT FPFNEDEDIK ENSBTAP00000020721/1-879 RSVVGTPAYL APEVLLNQGY NRSLDMWSVG VIMYVSLSGT FPFNEDEDIK 951 1000 ENSTTRP00000012232/1-837 DQIQNAAFMY PACPWSCISA GAIDLINNLL QVKMRKRYSV DKSLSHPWLQ BACU002140/1-1067 DQIQNAAFMY PACPWSCISA GAIDLINNLL QVKMRKRYSV DKSLSHPWLQ ENSP00000393978/1-878 DQIQNAAFMY PASPWSHISA GAIDLINNLL QVKMRKRYSV DKSLSHPWLQ bmy_06589T0/1-878 DQIQNAAFMY PACPWSCISA GAIDLINNLL QVKMRKRYSV DKSLSHPWLQ ENSBTAP00000020721/1-879 DQIQNAAFMY PACPWSCISA GAIDLINNLL QVKMRKRYSV DKSLSHPWLQ 1001 1050 ENSTTRP00000012232/1-837 EYQTWLDLRE LEGKMGERYI THESDDARW- ---------- ---------- BACU002140/1-1067 EYQTWLDLRE LEGKMGERYI THESDDARWE QFVAEHPLPG PGLPADGELG ENSP00000393978/1-878 EYQTWLDLRE LEGKMGERYI THESDDVRWE QFAAEHPLPG SGLPTDRDLG bmy_06589T0/1-878 EYQTWLDLRE LEGKMGERYI THESDDARWE QFVAEHPLPG PGLPADGELG ENSBTAP00000020721/1-879 EYQTWLDLRE LEGKMGERYI THESDDARWD QFVAEHPLPG PGLPADRVLG 1051 1100 ENSTTRP00000012232/1-837 ---------- ---------- BACU002140/1-1067 GSLPPRDHEM QGLAERISVL ENSP00000393978/1-878 GACPPQDHDM QGLAERISVL bmy_06589T0/1-878 GSLPPRDHEM QGLAERISVL ENSBTAP00000020721/1-879 GTLPPPDHEM QGLAERISVL