KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:28 2014 Check: 00 .. Name: ENSP00000365198/1-775 Len: 775 Check: 7435 Weight: 1.00 Name: ENSBTAP00000020730/1-635 Len: 775 Check: 5344 Weight: 1.00 Name: ENSTTRP00000016269/1-695 Len: 775 Check: 3906 Weight: 1.00 Name: bmy_09934T0/1-366 Len: 775 Check: 7765 Weight: 1.00 Name: BACU005665/1-634 Len: 775 Check: 5300 Weight: 1.00 // 1 50 ENSP00000365198/1-775 MMEDNKQLAL RIDGAVQSAS QEVTNLRAEL TATNRRLAEL SGGGGPGPGP ENSBTAP00000020730/1-635 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016269/1-695 ---------- ---------- ---------- ---------- ---------- bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000365198/1-775 GAAASASAAG DSAATNMENP QLGAQVLLRE EVSRLQEEVH LLRQMKEMLA ENSBTAP00000020730/1-635 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016269/1-695 ---------- ---------- ------LLRE EVSRLQEEVH LLRQMKEMLM bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000365198/1-775 KDLEESQGGK SSEVLSATEL RVQLAQKEQE LARAKEALQA MKADRKRLKG ENSBTAP00000020730/1-635 ---------- ---------- ---------- ---------- MKADRKRLKG ENSTTRP00000016269/1-695 KDLEESQGGK SSEVLAATEL RVQLAQKGQE LARAREALQA MKADRKRLKG bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 ---------- ---------- ---------- ---------- MKADRKRLKG 151 200 ENSP00000365198/1-775 EKTDLVSQMQ QLYATLESRE EQLRDFIRNY EQHRKESEDA VKALAKEKDL ENSBTAP00000020730/1-635 EKTDLVNQMQ QLYATLESRE EQLRDFIRNY EQHRKESEDA VKALAKEKDL ENSTTRP00000016269/1-695 EKTDLVSQMQ QLYATLESRE EQLRDFIRNY EQHRKESEDA VKALAKEKDL bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 EKTDLVSQMQ QLYATLESRE EQLRDFIRNY EQHRKESEDA VKALAKEKDL 201 250 ENSP00000365198/1-775 LEREKWELRR QAKEATDHAT ALRSQLDLKD NRMKELEAEL AMAKQSLATL ENSBTAP00000020730/1-635 LEREKWELRR QAKEATDHAT ALRSQLDLKD NRMKELEAEL AMAKQSLATL ENSTTRP00000016269/1-695 LEREKWELRR QAKEATDHAT ALRSQLDLKD NRMKELEAEL AMAKQSLATL bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 LEREKWELRR QAKEATDHAT ALRSQLDLKD NRMKELEAEL AMAKQSLATL 251 300 ENSP00000365198/1-775 TKDVPKRHSL AMPGETVLNG NQEWVVQADL PLTAAIRQSQ QTLYHSHPPH ENSBTAP00000020730/1-635 TKDVPKRHSL AMPGETVLNG NQEWVVQADL PLTAAIRQSQ QTLYHSHPPH ENSTTRP00000016269/1-695 TKDVPKRHSL AMPGETVLNG NQEWVVQADL PLTAAIRQSQ QTLYHSHPPH bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 TKDVPKRHSL AMPGETVLNG NQEWVVQADL PLTAAIRQSQ QTLYHSHPPH 301 350 ENSP00000365198/1-775 PADRQAVRVS PCHSRQPSVI SDASAAEGDR SSTPSDINSP RHRTHSLCNG ENSBTAP00000020730/1-635 PADRQAVRVS PCHSRQPSVI SDASAAEGDR SSTPSDINSP RHRTHSLCNG ENSTTRP00000016269/1-695 PGDRQAVRVS PCHSRQPSVI SDASAAEGDR SSTPSDINSP RHRTHSLCNG bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 PGDRQAVRVS PCHSRQPSVI SDASAAEGDR SSTPSDINSP RHRTHSLCNG 351 400 ENSP00000365198/1-775 DSPGPVQKNL HNPIVQSLED LEDQKRKKKK EKMGFGSISR VFARGKQRKS ENSBTAP00000020730/1-635 DSPGPVQKNL HNPIVQSLED LEDQKRKKKK EKMGFGSISR VFARGKQRKS ENSTTRP00000016269/1-695 DSPGPVQKNL HNPIVQSLED LEDQKRKKKK EKMGFGSISR VFARGKQRKS bmy_09934T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU005665/1-634 DSPGPVQKNL HNPIVQSLED LEDQKRKKKK EKMGFGSISR VFARGKQRKS 401 450 ENSP00000365198/1-775 LDPGLFDDSD SQCSPTRQSL SLSEGEEQMD RLQQVELVRT TPMSHWKAGT ENSBTAP00000020730/1-635 LDPGLFDDSD SQCSPTRQSL SLSEGEEQMD RLQQVELVRT TPMSHWKAGT ENSTTRP00000016269/1-695 LDPGLFDDSD SQCSPTRQSL SLSEGEEQTD RLQQVELVRT TPMSHWKAGT bmy_09934T0/1-366 --------SD SQCSPTRQSL SLSEGEEQTD RLQQVELVRT TPMSHWKAGT BACU005665/1-634 LDPGLFDDSD SQCSPTRQSL SLSEGEEQTD RLQQVELVRT TPMSHWKAGT 451 500 ENSP00000365198/1-775 VQAWLEVVMA MPMYVKACTE NVKSGKVLLS LSDEDLQLGL GVCSSLHRRK ENSBTAP00000020730/1-635 VQAWLEVVMA MPMYVKACAE NVKSGKVLLS LSDEDLELGL GVCSSLHRRK ENSTTRP00000016269/1-695 VQAWLEVVMA MPMYVKACAE NVKSGKVLLS LSDEDLELGP GVCSSLHRR- bmy_09934T0/1-366 VQAWLEVVMA MPMYVKACAE NVKSGKVLLS LSDEDLELGL GVCSSLHRRK BACU005665/1-634 VQAWLEVVMA MPMYVKACAE NVKSGKVLLS LSDEDLELGL GVCSSLHRRK 501 550 ENSP00000365198/1-775 LRLAIEDYRD AEAGRSLSKA AELDHHWVAK AWLNDIGLSQ YSQAFQNHLV ENSBTAP00000020730/1-635 LRLAIEDYRD AEAGRSLSKA ADLDHHWVAK AWLNDIGLSQ YSQAFQNHLV ENSTTRP00000016269/1-695 LRLAIEDYRD -EAG--LSKA ADLDHHWVAK AWLNDIGLSQ YSQAFQNHLV bmy_09934T0/1-366 LRLAIEDYRD AEAGRSLSKA ADLDHHWVAK AWLNDIGLSQ YSQAFQNHLV BACU005665/1-634 LRLAIEDYRD AEAGRSLSKA ADLDHHWVAK AWLNDIGLSQ YSQAFQNHLV 551 600 ENSP00000365198/1-775 DGRMLNSLMK RDLEKHLNVS KKFHQVSILL GIELLYQVNF SREALQERRA ENSBTAP00000020730/1-635 DGRMLNSLMK RDLEKHLNVS KKFHQVSILL GIELLYQVNF SREALQERRA ENSTTRP00000016269/1-695 DGRMLNSLMK RDLEKHLNVS KKFHQISILL GIELLYQVNF SREALQERRA bmy_09934T0/1-366 DGRMLNSLMK RDLEKHLNVS KKFHQISILL GIELLYQVNF SREALQERRA BACU005665/1-634 DGRMLNSLMK RDLEKHLNVS KKFHQISILL GIELLYQVNF SREALQERRA 601 650 ENSP00000365198/1-775 RCETQNIDPV VWTNQRVLKW VRDIDLKEYA DNLTNSGVHG AVLVLEPTFN ENSBTAP00000020730/1-635 RCETQNIDPV VWTNQRVLKW VRDIDLKEYA DNLTNSGVHG AVLVLEPTFN ENSTTRP00000016269/1-695 RCETQNIDPV VWTNQRVLKW VRDIDLKEYA DNLTNSGVHG AVLVLEPTFN bmy_09934T0/1-366 RCETQNIDPV VWTNQRVLKW VRDIDLKEYA DNLTNSGVHG AVLVLEPTFN BACU005665/1-634 RCEMQNVDPV VWTNQRVLKW VRDIDLKEYA DNLTNSGVHG AVLVLEPTFN 651 700 ENSP00000365198/1-775 AEAMATALGI PSGKHILRRH LAEEMSAVFH PANSTGIREA ERFGTPPGRA ENSBTAP00000020730/1-635 AEAMATALGI PSGKHILRRH LAEEMSAIFH PANCTGIREA ERFGTPPGRA ENSTTRP00000016269/1-695 AEAMATALGI PSGKHILRRH LAEEMSAVFH PANSTGIREA ERFGTPPGRA bmy_09934T0/1-366 AEAMATALGI PSGKHILRRH LAEEMSAIFH PANSTGIREA ERFGTPPGRA BACU005665/1-634 AEAMATALGI PSGKHILRRH LAEEMSAIFH SANSTGIREA ERFGTPPGRA 701 750 ENSP00000365198/1-775 SSVTRAGKEE NSSGLKYKAG RLPLGKIGRG FSSKDPDFHD DYGSLQNEDC ENSBTAP00000020730/1-635 SSVTRAGKEE NSGGIKYKAG RLPLGKIGRG FSNKDPDFHD DYGSLQNEDC ENSTTRP00000016269/1-695 SSITRAGKEE NSGGIKYKTG RLPLGKIGRG FSSKDPDFHD DYGSLQNEDC bmy_09934T0/1-366 SSITRAGKEE NSGGIKYKAG RLPLGKIGRG FS-KDPDFHD DYGSLQNEDC BACU005665/1-634 SSITRAGKEE NSGGIKYKAG RLPLGKIGRG FS-KDPDFHD DYGSLQNEDC 751 800 ENSP00000365198/1-775 GDDDPQSRLE QCRLEGYNSL EVTNV ENSBTAP00000020730/1-635 GDEDSQGRPE QCRLEGYNGL EVTNV ENSTTRP00000016269/1-695 GDDDSQGRPE QCRLEGYNGL EVTNV bmy_09934T0/1-366 GDDDSQGRPE QCHLEGYNGL EVTNV BACU005665/1-634 GDDDSQGRPE QCRLEGYNGL EVTNV