KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:29 2014 Check: 00 .. Name: ENSBTAP00000020740/1-598 Len: 629 Check: 2974 Weight: 1.00 Name: BACU013927/1-577 Len: 629 Check: 5854 Weight: 1.00 Name: ENSP00000261708/1-597 Len: 629 Check: 1346 Weight: 1.00 Name: bmy_08839T0/1-564 Len: 629 Check: 9670 Weight: 1.00 Name: ENSTTRP00000009400/1-598 Len: 629 Check: 9403 Weight: 1.00 // 1 50 ENSBTAP00000020740/1-598 MAEVIQERVE DRLPELQQLE RTGLFSHAEI KAIIRKALEL EYRIQRRSLL BACU013927/1-577 MAEIIQERIE DRLPELQQLE RIGLFSRAEI KAIIKKASDL EYRIQRRTLF ENSP00000261708/1-597 MAEIIQERIE DRLPELEQLE RIGLFSHAEI KAIIKKASDL EYKIQRRTLF bmy_08839T0/1-564 MAEIIQERIE DRLPELQQLE RIGLFSRAEI KAIIKKASDL EYRIQRRTLF ENSTTRP00000009400/1-598 MAEIIQERIE DRLPELQQLE RIGLFSRAEI KAIIKKASDL EYRIQRRTLF 51 100 ENSBTAP00000020740/1-598 KDDFIRYVQY EIHLLDLIEK RRARVGYTFK KDEIEDPIIH RIQSVFRRAS BACU013927/1-577 KEDFINYVQY EINLLELIQR RRVRIGYSFK KDEIENSIVH RVQGVFRRAS ENSP00000261708/1-597 KEDFINYVQY EINLLELIQR RRTRIGYSFK KDEIENSIVH RVQGVFQRAS bmy_08839T0/1-564 KEDFINYVQY EINLLELIQR RRVRIGYSFK KDEIENSIVH RVQGVFRRAS ENSTTRP00000009400/1-598 KEDFINYVQY EINLLELIQR RRVRIGYSFK KDEIENSIVH RVQGVFRRAS 101 150 ENSBTAP00000020740/1-598 IKWKDDVRLW LSFIAFCRKW ASNVHLSKIF SSLLAFHSNK PGLWILAAKW BACU013927/1-577 AKWKVSVQSA LS----CK-- ---------- --------GC EALWIMAAKW ENSP00000261708/1-597 AKWKDDVQLW LSYVAFCKKW ATKTRLSKVF SAMLAIHSNK PALWIMAAKW bmy_08839T0/1-564 AKWKDDVQLW LSYVVFCKKW ATKVQLSKVF SAMLAIHSNK PALWIMAAKW ENSTTRP00000009400/1-598 AKWKDDVQLW LSYVVFCKKW ATKVQLSKVF SAMLAIHSNK PALWIMAAKW 151 200 ENSBTAP00000020740/1-598 ELEDRFSSES ARQLFLRALR FHPRCPKLYE EYFRMELMHA EKLRKEKQEF BACU013927/1-577 EMEDRLSSES ARQLFLRALR FHPECPKLYQ EYFRMELMHA EKLRKEKQEF ENSP00000261708/1-597 EMEDRLSSES ARQLFLRALR FHPECPKLYK EYFRMELMHA EKLRKEKEEF bmy_08839T0/1-564 EMEDRLSSES ARQLFLRALR FHPECPKLYQ EYFRMELMHA EKLRKEKQEF ENSTTRP00000009400/1-598 EMEDRLSSES ARQLFLRALR FHPECPKLYQ EYFRMELMHA EKLRKEKQEF 201 250 ENSBTAP00000020740/1-598 EKANMDVGNL EHAEEILTGE LARIIYKNST SVIKSAKFHV SLLSIARLFD BACU013927/1-577 EKAKMDVGNL EYAEEILMGE LARIIYKNSV NIIKSAEFHV SLLSIAQLFD ENSP00000261708/1-597 EKASMDVENP DYSEEILKGE LAWIIYKNSV SIIKGAEFHV SLLSIAQLFD bmy_08839T0/1-564 EKAKMDV--- --VQNFMCHC FQLHSYSTLP KICK------ ---------- ENSTTRP00000009400/1-598 EKAKMDVGNL EYAEEILMGE LARIIYKNSV NIIKSAEFHV SLLSIAQLFD 251 300 ENSBTAP00000020740/1-598 FAKDLQREIY NDLKALHADD PVTWDYVARQ ELVIESQPVE ELPATKQAKA BACU013927/1-577 FAKDLQREIY DDLQALHTDD PLTWDYVARR ELEIESQPGE EPPTAKQTKV ENSP00000261708/1-597 FAKDLQKEIY DDLQALHTDD PLTWDYVARR ELEIESQ-TE EQPTTKQAKA bmy_08839T0/1-564 ---------- ---EKFMMND PLTWDYVARR ELEIESQPAE EPPTAKQTKV ENSTTRP00000009400/1-598 FAKDLQREIY DDLQALHTDD PLTWDYVARR ELEIESQPGE EPPTTKQTKV 301 350 ENSBTAP00000020740/1-598 KEVGRREERC CAVYEEAVKT VPTEAMWKCY MNFCMERFTK KTSSRLLRKK BACU013927/1-577 AEVGRREERC CAVYEEAVKT LRTETMCKCY INFCMERFAK KTSSRLLREK ENSP00000261708/1-597 VEVGRKEERC CAVYEEAVKT LPTEAMWKCY ITFCLERFTK KSNSGFLRGK bmy_08839T0/1-564 AEVGRREERC CAVYEEAVKT LRTEAMCKCY INFCMERFAK KTSSRLLREK ENSTTRP00000009400/1-598 AEVGRREERC CAVYEEAVKT LPTEAMCKCY INFCMERFAK KTSSRHLRGK 351 400 ENSBTAP00000020740/1-598 RLERTMVAFW KAHELKLLPE LQYRQLSKLL LHRQLLKESL EVADAGVKLF BACU013927/1-577 RLERTMVAFR KAHDLKLLPE LQYKQWSELL LRHDFLTEAL EVAGAGMELF ENSP00000261708/1-597 RLERTMTVFR KAHELKLLSE CQYKQLSVSL LCYNFLREAL EVAVAGTELF bmy_08839T0/1-564 RLERTMVAFR KAHDLRLLPE FQYKQWSELL LRHDFLTEAL EVAGAGMELF ENSTTRP00000009400/1-598 RLERTMVAFR KAHDLKLLSE FQYKQWSELL LHHDFLTEAL EVAGAGMELF 401 450 ENSBTAP00000020740/1-598 KKSVEMWQVK LEALITSESH EMSKGFEQAF EYLKPQICLP LWLTWAQWSE BACU013927/1-577 PGSVVMWQVK LQVLIASKSP DVAVLFEEAF VHLKPQ---- ---------- ENSP00000261708/1-597 RDSGTMWQLK LQVLIESKSP DIAMLFEEAF VHLKPQVCLP LWISWAEWSE bmy_08839T0/1-564 PGSVMMWQXK LQVLIASKSP DVAMLFEEAF VHLKPQICLP LWISWAEWSE ENSTTRP00000009400/1-598 RGSVMMWQVK LQVLIASKSP DVAMLFEEAF VHLKPQICLP LWISWAEWSE 451 500 ENSBTAP00000020740/1-598 DAGKQEETEA IYKRAIFGLP GADSVPVKEM YLNWAYRSGG YKKARDVFKS BACU013927/1-577 ---------- ---KAVLAVT GGDSVTLKDK YLDWAYRSGG YKKARAVFKS ENSP00000261708/1-597 GAKSQEDTEA VFKKALLAVI GADSVTLKNK YLDWAYRSGG YKKARAVFKS bmy_08839T0/1-564 GAKSQEDTEA IFKKAVLAVT GGDSVTLKDK YLDWAYRSGG YKKARAVFKS ENSTTRP00000009400/1-598 GAKSQEDTEA IFKKAVLAIT GGDSVTLKDK YLDWAYRSGG YKKARAVFKS 501 550 ENSBTAP00000020740/1-598 LQENRPFSVD FFRKMIQFEK EQESCKMENL REY---YERA LREFGTNDSD BACU013927/1-577 GAQSFPHDSP AHGEGTHCEE EGFAVDDEDS DGEPSPWELS EGVSGCPRRE ENSP00000261708/1-597 LQESRPFSVD FFRKMIQFEK EQESCNMANI REY---YERA LREFGSADSD bmy_08839T0/1-564 LQESRPFSVD FFRKMIQFEK EQESCKIANL REY---YERA LREFGSVDSD ENSTTRP00000009400/1-598 LQESRPFSVD FFRKMIQFEK EQESCKMANL REY---YERA LREFGSVDSD 551 600 ENSBTAP00000020740/1-598 LWMDYIKEEL NHPL----GR PENCGQIY-- -------WRA MKMLQGESV- BACU013927/1-577 QAADLFNEDW DLELKADQGN PYDADDIQGC LSQEVRPWVC CA-PQGDMIY ENSP00000261708/1-597 LWMDYMKEEL NHPL----GR PENCGQIY-- -------WRA MKMLQGESA- bmy_08839T0/1-564 LWMDYIKEEL NHPL----GR PEHCGQIY-- -------WRA MKMLQGESA- ENSTTRP00000009400/1-598 LWMDYIKEEL NHPL----GR PEHCGQIY-- -------WRA MKMLQGESA- 601 650 ENSBTAP00000020740/1-598 -------EQF MAKHA--LYQ AGRL----- BACU013927/1-577 DPSWHHPPPL IPHYSKMVFE TGQFDDAED ENSP00000261708/1-597 -------EAF VAKHA--MHQ TGHL----- bmy_08839T0/1-564 -------ELF VAKHA--VHQ AGQL----- ENSTTRP00000009400/1-598 -------ELF VAKHA--VHQ AGQL-----