KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:29 2014 Check: 00 .. Name: ENSTTRP00000008102/1-680 Len: 690 Check: 1250 Weight: 1.00 Name: ENSP00000325929/1-690 Len: 690 Check: 5676 Weight: 1.00 Name: ENSBTAP00000020741/1-682 Len: 690 Check: 3042 Weight: 1.00 Name: bmy_09572T0/1-617 Len: 690 Check: 850 Weight: 1.00 Name: BACU000127/1-681 Len: 690 Check: 8510 Weight: 1.00 // 1 50 ENSTTRP00000008102/1-680 MGTTNDEMVS VEQTSSSSFN PLCFECGQQH WTRENHLYNY QDEVDDDLVC ENSP00000325929/1-690 MGTTSDEMVS VEQTSSSSLN PLCFECGQQH WTRENHLYNY QNEVDDDLVC ENSBTAP00000020741/1-682 MGTTSDEMGS VEQTLSSSFN PLCFECGQQH WTRENHLYNY QDEVDDDLVC bmy_09572T0/1-617 MGTTNDEMVP VEQTSSSSFN PLCFECGQQH WTRENHLYNY QDEVDDDLVC BACU000127/1-681 MGTTNDEMVP VEQTSSSSFN PLCFECGQQH WTRENHLYNY QDEVDDDLVC 51 100 ENSTTRP00000008102/1-680 HICLQPLLQP LDTPCGHTFC CKCLRNFLQE KDFCPLDRKR LHFKLCKKSS ENSP00000325929/1-690 HICLQPLLQP LDTPCGHTFC YKCLRNFLQE KDFCPLDRKR LHFKLCKKSS ENSBTAP00000020741/1-682 HICLQPLLQP LDTPCGHTFC CKCLRNFLQE KDFCPLDRKK LHFKSCKKSS bmy_09572T0/1-617 HICLQPLLQP LDTPCGHTFC CKCLRNFLQE KDFCPLDRKR LHFKLCKKSS BACU000127/1-681 HICLQPLLQP LDTPCGHTFC CKCLRNFLQE KDFCPLDRKR LHFKLCKKSS 101 150 ENSTTRP00000008102/1-680 ILVHKLLDKL LVLCPFSSVC QDVVQRCDLE AHLKNRCPGA SHQRVALERR ENSP00000325929/1-690 ILVHKLLDKL LVLCPFSSVC KDVMQRCDLE AHLKNRCPGA SHRRVALERR ENSBTAP00000020741/1-682 ILVHKLLDKL LISCPFSSVC HDVMQRCDLE GHLKNRCPGA SHRRAALEKR bmy_09572T0/1-617 ILVHKLLDKL LVLCPFSSVC QDVVQRCDLE AHLKNRCPGA SHQRVALERQ BACU000127/1-681 ILVHKLLDKL LVLCPFSSVC QDAVQRCDLE AHLKNRCPGA SHQRVALERR 151 200 ENSTTRP00000008102/1-680 KTSKAQTEIE NENGTMVIDL PATLSPEADC SG-------P TLTSVSLPAW ENSP00000325929/1-690 KTSRTQAEIE NENGPTLLDP AGTLSPEADC LGTGAVPVER HLTSASLSTW ENSBTAP00000020741/1-682 KTSKTQMEIE NENGTTVTDL PAALSPETDC SG-------R TLTSASLPSW bmy_09572T0/1-617 KTSKTQTEIE NENGTTVIDV PATLSPEADC SG-------P TLTSASLPAW BACU000127/1-681 KSSKTQTEIE NENGTTVIDL PATSSPEADC SG-------P TLTSVSLPAW 201 250 ENSTTRP00000008102/1-680 TEEPGLDNPA FEESPTGDTT QQPLSLPEGE ITTIEIHRSN PYIQLGISIV ENSP00000325929/1-690 SEEPGLDNPA FEESAGADTT QQPLSLPEGE ITTIEIHRSN PYIQLGISIV ENSBTAP00000020741/1-682 TEEPGLDNPA FEESPAGDTT PQPLSLPEGE ITTIEIHRSN PFIRLGISIV bmy_09572T0/1-617 TEEPGLDNPA FEESPAGDTT QQPLSLPEGE ITTIEIHRSN PYIQLGISIV BACU000127/1-681 TEEPGLDNPV FEESPAGDTT QQPLSLPEGE ITTIEIHRSN PYIQLGISIV 251 300 ENSTTRP00000008102/1-680 GGNETPLINI VIQEVYRDGI IARDGRLLAG DQILQVNHHN ISSVSHNHAR ENSP00000325929/1-690 GGNETPLINI VIQEVYRDGV IARDGRLLAG DQILQVNNYN ISNVSHNYAR ENSBTAP00000020741/1-682 GGNETPLINI VIQEVYRDGV IAKDGRLLAG DQILQVNNYN ISSVSHNYAR bmy_09572T0/1-617 GGNETPLINI VIQEVYRDGI IARDGRLLAG DQILQVNHHN ISSVSHNHAR BACU000127/1-681 GGNETPLINI VIQEVYRDGI IARDGRLLAG DQILQVNHHN ISSVSHNHAR 301 350 ENSTTRP00000008102/1-680 AVLSQPCSTL HLTVLRERRC GGRAHSRPVG GSPPEEVFQV VLHKRDSAEQ ENSP00000325929/1-690 AVLSQPCNTL HLTVLRERRF GNRAHNHSDS NSPREEIFQV ALHKRDSGEQ ENSBTAP00000020741/1-682 AVLSQPCSTL QLTVLRERRF GSRAHGHPEG GSPREEVFPV VLHKRDSAEQ bmy_09572T0/1-617 AVLSQPCSTL HLTVLRERRF GSRAHNRPEG GSPREEVFQV VLHKRDSAEQ BACU000127/1-681 AVLSQPCSTL HLTVLRERRF GSRAHNRPEG GSPREEVFLV VLHKRDSAEQ 351 400 ENSTTRP00000008102/1-680 LGIKLVRRTD EPGVFVLDLL EGGLAAQDGR LSGNDRVLAV NGHDLKHGTP ENSP00000325929/1-690 LGIKLVRRTD EPGVFILDLL EGGLAAQDGR LSSNDRVLAI NGHDLKYGTP ENSBTAP00000020741/1-682 LGIKLVRRTD EPGVFILDLL EGGLAAQDGR LSSNDRVLAI NGHDLKHGTP bmy_09572T0/1-617 LGIKLVRRTD EPGVFVLDLL EGGLAAQDGR LSGNDRVLAI NGHDLKHGTP BACU000127/1-681 LGIKLVRRTD EPGVFVLDLL EGGLAAQDGR LSGNDRVLAI NGHDLKHGTP 401 450 ENSTTRP00000008102/1-680 ELAAQIIQAS GERVNLTIAR PGKPQPGNAV REAGTQ--SS QHHTQPLPYN ENSP00000325929/1-690 ELAAQIIQAS GERVNLTIAR PGKPQPGNTI REAGNHSSSS QHHTPPPYYS ENSBTAP00000020741/1-682 ELAAQIIQAS GERVSLTIAR PGKPQPGSTV REAGTQ-SSS QHHTQTLPYN bmy_09572T0/1-617 ELAAQIIQAS GERVNLTIAR PGKPQPGNAV REAGTQ--SS QHHAQPLPYN BACU000127/1-681 ELAAQIIQAS GETVNLTISR PGKPQPGNAV REAGTQ--SS QHHAQPLPYN 451 500 ENSTTRP00000008102/1-680 RPSSHKDLAQ CVTCQEKHIT IKKEPHESLG MTVAGGRGSK SGELPIFVTS ENSP00000325929/1-690 RPSSHKDLTQ CVTCQEKHIT VKKEPHESLG MTVAGGRGSK SGELPIFVTS ENSBTAP00000020741/1-682 RPSSHKDLAQ CVTCQEKHIT IKKEPHESLG MTVAGGRGSK SGELPIFVTS bmy_09572T0/1-617 RPSSHKDLAQ CVTCQEKHIT VKKEPHESLG MTVAGGRGSK SGELPIFVTS BACU000127/1-681 RPSSHKDLAQ CVTCQEKHIT VKKEPHESLG MTVAGGRGSK SGELPIFVTS 501 550 ENSTTRP00000008102/1-680 VPPHGCLARD GRIKRXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000325929/1-690 VPPHGCLARD GRIKRGDVLL NINGIDLTNL SHSEAVAMLK ASAASPAVAL ENSBTAP00000020741/1-682 VPPHGCLARD GRIKRGDILL NINGIDLTNL SHSEAVAMLK ASATSPTVAL bmy_09572T0/1-617 VPPHGCLARD GRIKRGDILL NINGIDLTSL SHSEAVAXLK ASATSPTVAL BACU000127/1-681 VPPHGCLARD GRIKRGDILL NINGIDLTSL SHSEAVAMLK ASATSPTVAL 551 600 ENSTTRP00000008102/1-680 XXXXXXXXXX XXXXXXEQPS TVSENEYDAS WSPSWVMWLG LXXX-XXXXX ENSP00000325929/1-690 KALEVQIVEE ATQNAEEQPS TFSENEYDAS WSPSWVMWLG LPSTLHSCHD ENSBTAP00000020741/1-682 KALEVQVVEE AAQGLDEPLS AVSENEYDAS WSPSWVMWLG LPSALHSCHD bmy_09572T0/1-617 KALEVQVVEE AAHGPDEQPS TVSENEYDAS WSPSWVMWLG LPR--YCSFS BACU000127/1-681 KALEVQVVEE AAHGPDDQPS TVSENEYDAS WSPSWVMWLG LPSALHSCHD 601 650 ENSTTRP00000008102/1-680 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXCGDM ENSP00000325929/1-690 IVLRRSYLGS WGFSIVGGYE ENHTNQPFFI KTIVLGTPAY YDGRLKCGDM ENSBTAP00000020741/1-682 IVLRRSYLGS WGFSIVGGYE ENHTNQPFFI KTIVLGTPAY YDGRLKCGDM bmy_09572T0/1-617 VVLQKIAIAT ---------- --------FI RV-------- ---------- BACU000127/1-681 IVLRRSYLGS WGFSIVGGYE ENHTNQPFFI KTIVLGTPAY YDGRLKCGDM 651 700 ENSTTRP00000008102/1-680 IVAVNGLSTV GMSHSALVPM LKGQRNKVTL TVVCWPGSLV ENSP00000325929/1-690 IVAVNGLSTV GMSHSALVPM LKEQRNKVTL TVICWPGSLV ENSBTAP00000020741/1-682 IVAVNGLSTV GMSHSALVPM LKEQRNKVTL TVICWPGSLV bmy_09572T0/1-617 ---------- ---YSTANSL IEEEKRL--- ---------- BACU000127/1-681 IVAVNGLSTV GMSHSALVPM LKGQRSKVTL TVVCWPGSLV