KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:31 2014 Check: 00 .. Name: ENSP00000252809/1-308 Len: 313 Check: 2560 Weight: 1.00 Name: ENSBTAP00000020744/1-310 Len: 313 Check: 7215 Weight: 1.00 Name: ENSTTRP00000004094/1-308 Len: 313 Check: 6813 Weight: 1.00 Name: bmy_02630T0/1-308 Len: 313 Check: 6042 Weight: 1.00 Name: BACU016659/1-294 Len: 313 Check: 5417 Weight: 1.00 // 1 50 ENSP00000252809/1-308 --MPGQELRT VNGSQMLLVL LVLSWLPHGG ALSLAEASRA SFPGPSELHS ENSBTAP00000020744/1-310 IAMPGQRPAA PHRSRMLLML LMFSWLRSGG ALSLTQEHLQ TFQGPSNVHS ENSTTRP00000004094/1-308 --MPGQRPTP PHCSPMLLML FMFSWLPSRG ALSLAQEHLP TFPGPSNVHS bmy_02630T0/1-308 --MPGQRPTP PHRSPMLLML LMFSWLPSGG ALSLAQEHLS AFPGPSNVHS BACU016659/1-294 ---------- -----MLLML LMFSWLPSGG ALSLAQEHLS AFPGPANVHS 51 100 ENSP00000252809/1-308 --EDSRFREL RKRYEDLLTR LRANQSWEDS NTDLVPAPAV RILTPEVRLG ENSBTAP00000020744/1-310 SPDISRFREL RKRYEDLLTR LRANQTWEDS NPDLIPPPQV RIVTPKLRLG ENSTTRP00000004094/1-308 SPDVSRFREL RKRYEDLLTR LRANQTREDS NPDLIPLPQV LVVTPKLRLG bmy_02630T0/1-308 SPDVSRFREL RKRYEDLLTR LRANQTREDS NPDLIPPPQV RIVTPKLRLG BACU016659/1-294 SPDVSRFREL RKRYEDLLTR LRANQTREDS NPDLIP-PEV RIVTPKLRLG 101 150 ENSP00000252809/1-308 SGGHLHLRIS RAALPEGLPE ASRLHRALFR LSPTASRSWD VTRPLRRQLS ENSBTAP00000020744/1-310 PGGHLHLRIP RVNLTEGLPA ASRLHRALLR LSPKAWSSWD VTRPLRRQLR ENSTTRP00000004094/1-308 PGGHLHLRIP RVDLTEGLPA ASRLHRALLR LSPKARSSWD VTRPLQRQLS bmy_02630T0/1-308 PGGHLHLRIP RVDLTEGLPA ASRLHRALLR LSPKARSSWD VTRPLQRQLS BACU016659/1-294 PGGHLHLRIP RVDLTEGLPA ASRLHRALLQ LSPKARSSWD VTRPLQRQLS 151 200 ENSP00000252809/1-308 LARPQAPALH LRLSPPPSQS DQLLAESSSA RPQLELHLRP QAARGRRRAR ENSBTAP00000020744/1-310 LGGSRGPSIR LR---LLARP DQLQEALPSA PPQLELHWRP SATRGRRHAH ENSTTRP00000004094/1-308 LGSSRAPAIR LR---PLRRP DQLLEALSSA QPQLELHWRT SATRGRRHAH bmy_02630T0/1-308 LGSSRAPAIR LR---PLRRT DQLLDALSSA QPQLELHWRT SATRGRRHAH BACU016659/1-294 LGSSRSPAIR LR---PLRRT DQLLEALSSA QPQLELHWRT SATRGRRHAH 201 250 ENSP00000252809/1-308 ARNGDHCPLG PGRCCRLHTV RASLEDLGWA DWVLSPREVQ VTMCIGACPS ENSBTAP00000020744/1-310 AHTRDGCPLG EGRCCHLQSL RASLEDLGWA DWVLAPRELD VRMCIGACPS ENSTTRP00000004094/1-308 ARTRDGCPLG EGRCCRLQSL RASLEDLGWA DWVLAPRELD VRMCTGACPS bmy_02630T0/1-308 ARTRDGCPLG EGRCCRLQSL RASLEDLGWA DWVLAPRELD VRMCIGACPS BACU016659/1-294 ARTRDGCPLG EGRCCRLQSL RASLEDLGWA DWVLAPRELD VRMCIGACPS 251 300 ENSP00000252809/1-308 QFRAANMHAQ IKTSLHRLKP DTVPAPCCVP ASYNPMVLIQ KTDTG-VSLQ ENSBTAP00000020744/1-310 HFRSANTHAQ MQARLHGLNP DAAPAPCCVP ASYEPVVLMH QDSDGRVSLT ENSTTRP00000004094/1-308 HFRSANTHAQ MQARLHGLNP DAAPAPCCVP ASYDPVVLMH QDSDGRVSLT bmy_02630T0/1-308 HFRSANTHAQ MQARLHGLNP DAAPAPCCVP ASYDPVVLMH QDSDGRVSLT BACU016659/1-294 HFRSANTHAQ MQARLHGLNP DAAPAPCCVP ASYDPVVLMH QDSDGRVSLT 301 350 ENSP00000252809/1-308 TYDDLLAKDC HCI ENSBTAP00000020744/1-310 PFDDLVAKDC HCV ENSTTRP00000004094/1-308 PFDDLVAKDC HCV bmy_02630T0/1-308 PFDDLVAKDC HCV BACU016659/1-294 PFDDLVAKDC HCV