KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:33 2014 Check: 00 .. Name: ENSP00000328207/1-255 Len: 294 Check: 8472 Weight: 1.00 Name: ENSBTAP00000020759/1-230 Len: 294 Check: 7150 Weight: 1.00 Name: bmy_10016T0/1-286 Len: 294 Check: 8967 Weight: 1.00 Name: BACU001185/1-269 Len: 294 Check: 3849 Weight: 1.00 // 1 50 ENSP00000328207/1-255 MAQHGAMG-- -AFRALCGLA LLCALSLGQR PTGGPGCGPG RLLLGTGTDA ENSBTAP00000020759/1-230 ---MGARG-- -ARVALCGVA LLCALGLGQR PLSDLSCSPG QVLHGTGTDA bmy_10016T0/1-286 MGAAGAMGAR VARVALCGVA LLCALGLAQR PPGGLSCGPG RHLHGTGTSA BACU001185/1-269 MGAAGAMGAR VARVALCGVA LLCALGLAQR PPGGLSCGPG RHLHGTGTSA 51 100 ENSP00000328207/1-255 RCCRVHTTRC CRDY------ ---------- -PGEECCSEW DCMCVQPEFH ENSBTAP00000020759/1-230 RCCR-CA--- ---------- ---------- -PDEGTCPEP DCQCIQPEFH bmy_10016T0/1-286 RCCRSCTPGP GAGRPGEGGS APLLRGLFVP CPAEGVCPEL GCQCVQPEFH BACU001185/1-269 RCCRSCT--- ---------- ---------- -PAEGVCPEL GCQCVQPEFH 101 150 ENSP00000328207/1-255 CGDPCCTTCR HHPCPPGQGV QSQGKFSFGF QCIDCASGTF SGGHEGHCKP ENSBTAP00000020759/1-230 CGDPQCKSCK YYSCPPGQGV QPEGNFKFGF ECVDCAVGTF SRGHEGRCKP bmy_10016T0/1-286 CGDPQCKSCK YYSCPPGQRA WPVGKFNFGF ECIDCAAGTF SGGREGRCKP BACU001185/1-269 CGDPQCKSCK YYSCPPGQWA RPVGEFNFGF ECIDCAAGTF SGGREGRCKP 151 200 ENSP00000328207/1-255 WTD------- -------CCW RCRRRPKTPE AASSPRKSGA SDRQRRRGGW ENSBTAP00000020759/1-230 WAD------- ---------- ---------- ----CVQLGF PTLFPGNKTH bmy_10016T0/1-286 WAE------- AAALLRGCSG GRGLTEGSVS VRPSCSKLGF PTAFPGNKTH BACU001185/1-269 WADDPQTARR AAALLRGCSG GRGLTEGSVS VRPSCSKLGF PTAFPGNKTH 201 250 ENSP00000328207/1-255 ETCGCEPGRP PGPPTAASPS PGAPQAAGAL RSALGR-ALL PWQQKWVQEG ENSBTAP00000020759/1-230 NAV-CSLGLP PTEPPSPVTI VILSLAACIL ALTVTQLSLH IWQLRRQRMW bmy_10016T0/1-286 DAV-CSPGLP PTEPHGLLTA ILLALAACIL ALTVTQLSLH IWQLRRQRVR BACU001185/1-269 DAV-CSPGLP PTEPHGLLTA ILLALTACIL AVTVTQLSLH IWQLRRQRAR 251 300 ENSP00000328207/1-255 GSDQR---PG PCSSAAAAGP CRRERETQSW PPSSLAGP-D GVGS ENSBTAP00000020759/1-230 PPETQ-LLEA PPPPPEDACS CQFPEEERGE RLSENKGRQE DLWV bmy_10016T0/1-286 PPETQLLLEA PPPPPEDACS CPFPEEERGE PLSENKGRLE DLWV BACU001185/1-269 PPEMQLLLEA PPPPPEDACS CPFPEEERGE PLSENKGRLE DLWV