KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:34 2014 Check: 00 .. Name: ENSP00000254928/1-437 Len: 437 Check: 1351 Weight: 1.00 Name: ENSBTAP00000020770/1-437 Len: 437 Check: 9459 Weight: 1.00 Name: bmy_00123T0/1-269 Len: 437 Check: 2162 Weight: 1.00 Name: BACU010498/1-437 Len: 437 Check: 8788 Weight: 1.00 Name: ENSTTRP00000003869/1-437 Len: 437 Check: 627 Weight: 1.00 // 1 50 ENSP00000254928/1-437 MAAPSWRGAR LVQSVLRVWQ VGPHVARERV IPFSSLLGFQ RRCVSCVAGS ENSBTAP00000020770/1-437 MAASSWRGAV LLRTVSGLWQ AGPDAAREWM TRLPSLLGFQ QRCVSCVAGP bmy_00123T0/1-269 ------MGVG QI-------- PYPVSFGSWG ERVVITL--- ---------- BACU010498/1-437 MAAPGRSGAA LLRTVIGVWP PGPDAAREWV TRLPSLLGSQ QRCVSCVSGP ENSTTRP00000003869/1-437 MAASGRRGAE LLRTVLGVWP PGPDAAREWV TRLPLLLGSQ QRCVSCVSGP 51 100 ENSP00000254928/1-437 AFSGPRLASA SRSNGQGSAL DHFLGFSQPD SSVTPCVPAV SMNRDEQDVL ENSBTAP00000020770/1-437 AFSGPRLASA SRPNGQNSAL DCFLGLSQPD NSLPFRVPAV SVHRDEQDLL bmy_00123T0/1-269 ---------- -------SSL HC-------- ---------- ---------- BACU010498/1-437 AFFGPRLASA SRPNGQNSAL DCFLGLSQPD SSLNFRVPAV CMHRDEQDLL ENSTTRP00000003869/1-437 AFSGPRLASA SRPNGQSSAL DCFLGLSQPD SSLNFRVPAV SMHRDEQDLL 101 150 ENSP00000254928/1-437 LVHHPDMPEN SRVLRVVLLG APNAGKSTLS NQLLGRKVFP VSRKVHTTRC ENSBTAP00000020770/1-437 LVHRPDMPEN PRVLRVVLLG APNAGKSTLS NQLLGRKVFP VSKKVHTTRS bmy_00123T0/1-269 -----QLP-- ---------- ---------- ---------- ---------- BACU010498/1-437 LVHRPDMPEN PRVLRVVLLG APNAGKSTLS NQLLGRKVFP VSQKVHTTRS ENSTTRP00000003869/1-437 LVHRPDMPEN PRVLRAVLLG APNAGKSTLS NQLLGRKVFP VSQKVHTTRS 151 200 ENSP00000254928/1-437 QALGVITEKE TQVILLDTPG IISPGKQKRH HLELSLLEDP WKSMESADLV ENSBTAP00000020770/1-437 QALGVITEKE TQVILLDTPG LISPAKQKRH HLELSLLEDP WKSMESADLV bmy_00123T0/1-269 ---------- ---------- ---------- ---------- ---------V BACU010498/1-437 QALGVITEKE TQVILLDTPG LISPAKQKRH HLELSLLEDP WKSMESADLV ENSTTRP00000003869/1-437 QALGVITEKE TQVILLDTPG LISPAKQKRH HLELSLLEDP WKSMESADLV 201 250 ENSP00000254928/1-437 VVLVDVSDKW TRNQLSPQLL RCLTKYSQIP SVLVMNKVDC LKQKSVLLEL ENSBTAP00000020770/1-437 VVLVDVSDKW TRNQLSPQVL RCLTQFSQVP SILVMNKVDC LKQKSVLLEL bmy_00123T0/1-269 VVLVDVSDKW TRNQLSPQVL QCLTQFSQVP SILVMNKVDC LKQKSVLLEL BACU010498/1-437 VVLVDVSDKW TRNQLSPQVL QCLTHFSQVP SILVMNKVDC LKQKSVLLEL ENSTTRP00000003869/1-437 VVLVDVSDKW TRNQLSPQVL QCLTQFSQVP SILVMNKVDC LKQKSVLLEL 251 300 ENSP00000254928/1-437 TAALTEGVVN GKKLKMRQAF HSHPGTHCPS PAVKDPNTQS VGNPQRIGWP ENSBTAP00000020770/1-437 TAALTEGVVN GKKLKTKQAL RSRPDTHCPS PAAQGPNPQP VRDPQQMGWP bmy_00123T0/1-269 TAALTEGVVN GKKLKTRQAV RSQPGNHCPS PAAKGPNTLS MGDPQRIGWP BACU010498/1-437 TAALTEGVVN GKKLKTRQAV CSQRGNHCPS LAAKGPNTLS MGDPQQIGWP ENSTTRP00000003869/1-437 TAALTEGVVN GKKLKMRQAV RSQPGNHCSS PAAKGPNTLS VGDPQRIGWP 301 350 ENSP00000254928/1-437 HFKEIFMLSA LSQEDVKTLK QYLLTQAQPG PWEYHSAVLT SQTPEEICAN ENSBTAP00000020770/1-437 HFQEIFMLSA LSQEDVKTLK QYLLAQARPG PWEFHSEVLT SQTPEEICAN bmy_00123T0/1-269 HFQEIFMLSA LSQEDVKTLK QYLLAQARPG PWEFHSGVLT SQTPEEICAN BACU010498/1-437 HFQEIFMLSA LSQEDVKTLK QYLLAQAQPG PWEFHSGVLT SQTPEEICAN ENSTTRP00000003869/1-437 HFQEIFMLSA LSQEDVKTLK QYLLAQARPG PWEFHSGVLT SQTPEEICAN 351 400 ENSP00000254928/1-437 IIREKLLEHL PQEVPYNVQQ KTAVWEEGPG GELVIQQKLL VPKESYVKLL ENSBTAP00000020770/1-437 MIREKLLEYL PEEVPYNVQQ KTVVWDEGPS GELVIEQKLL VSKESHMKIL bmy_00123T0/1-269 MIREKLLEYL PQEVPYNVQQ KTVMWEEGPN GKLMIEQKLL VPKESHMRIL BACU010498/1-437 MIREKLLEYL PQEVPYNVQQ KTVTWEEGPN GKLMIEQKLL VPKESHMRIL ENSTTRP00000003869/1-437 MIREKLLEYL PQEVPYNVQQ KTVMWEEGPD GKLMIEQKLL VPKESHMRIL 401 450 ENSP00000254928/1-437 IGPKGHVISQ IAQEAGHDLM DIFLCDVDIR LSVKLLK ENSBTAP00000020770/1-437 IGPKGYLIAQ IAQEVGRDLM NIFLCEVQLR LSVKLLK bmy_00123T0/1-269 IGPKGHLISQ MAQEVGRDLM NIFLCEVQLR LSVKLLK BACU010498/1-437 IGPKGHLISQ MAQEVGRDLM NIFLCEVQLR LSVKLLK ENSTTRP00000003869/1-437 IGPKGHLISQ VAQEVGRDLM NIFLCEVQLR LSVKLLK