KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:35 2014 Check: 00 .. Name: BACU001183/1-391 Len: 422 Check: 5231 Weight: 1.00 Name: ENSP00000353094/1-362 Len: 422 Check: 4973 Weight: 1.00 Name: ENSBTAP00000020778/1-254 Len: 422 Check: 7679 Weight: 1.00 Name: ENSTTRP00000016131/1-362 Len: 422 Check: 3549 Weight: 1.00 Name: bmy_10018T0/1-240 Len: 422 Check: 4164 Weight: 1.00 // 1 50 BACU001183/1-391 ---------- ---------- ---------- -MDASARPAN HSSARERAAN ENSP00000353094/1-362 MVWPWVAMAS RWGPLIGLAP CCLWLLGAVL LMDASARPAN HSSTRERVAN ENSBTAP00000020778/1-254 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016131/1-362 AAQTPAAMTS RQAPLCGLAP RCLWLLGAVL LMDASARPAN HSSARERVGS bmy_10018T0/1-240 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001183/1-391 REENEMLPPD HLNGVKLEMD GHLNRDFHQE VFLGKDAGGF EEDAGPRRSR ENSP00000353094/1-362 REENEILPPD HLNGVKLEMD GHLNRGFHQE VFLGKDLGGF DEDAEPRRSR ENSBTAP00000020778/1-254 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016131/1-362 REENEILPPD HLNGVKLEMD GHLNRDFHQE VFLGKDTDGF EQDAEPRRSR bmy_10018T0/1-240 ---------- ---------- ---------- ---------- ---------- 101 150 BACU001183/1-391 RKLMLIFSKV DLNTDRRISA KEMQHWIMEK TAEHFQEAIA ESRAHFRAVD ENSP00000353094/1-362 RKLMVIFSKV DVNTDRKISA KEMQRWIMEK TAEHFQEAME ESKTHFRAVD ENSBTAP00000020778/1-254 --------RV DLNTDRRISA KEMQKWIMQK TAEHFQEAVA ESRAHFRAVD ENSTTRP00000016131/1-362 RKLMAIFSKV DLNTDRRISA KEMQRWIMEK TAEHFQEAIA ESKAHFRAVD bmy_10018T0/1-240 ---------- ---------- --MQHWIMEK TAEHFQEAIA ESRAHFRAVD 151 200 BACU001183/1-391 PDGDGRVSWD EYKVKFLASK GHDEREVADK IKNKWDLNVD EESKGSASRG ENSP00000353094/1-362 PDGDGHVSWD EYKVKFLASK GHSEKEVADA IRLNEELKVD EET------- ENSBTAP00000020778/1-254 PDGDGHVSWD EYKVKFLVTK GHNEREVAEK IKNKWDLNID EET------- ENSTTRP00000016131/1-362 PDGDGHVSWD EYKVKFLASK GHDEREVADK IKNKWDLNID EET------- bmy_10018T0/1-240 PDGDGRVSWD EYKVRFLASK GHDEREVADK IKNKWDLNVD EET------- 201 250 BACU001183/1-391 QCGACGSTDA EREVGEVLTD ARLSAQEVLE NLKDRWYQAD NPPPDLLLTE ENSP00000353094/1-362 ---------- ---------- -----QEVLE NLKDRWYQAD SPPADLLLTE ENSBTAP00000020778/1-254 ---------- ---------- -----QEVLE NLKDRWYQAD NPPPDLLLTE ENSTTRP00000016131/1-362 ---------- ---------- -----QEVLE NLKDRWYQAD NPPPDLLLTE bmy_10018T0/1-240 ---------- ---------- -----QEVLE NLKDRWYQAD NPPPDLLLTE 251 300 BACU001183/1-391 SEFLSFLHPE HSRGMLQFMV KEIIRDLDQD GDKKLSLSEF ISLPVGTVEN ENSP00000353094/1-362 EEFLSFLHPE HSRGMLRFMV KEIVRDLDQD GDKQLSVPEF ISLPVGTVEN ENSBTAP00000020778/1-254 SEFLSFLHPE HSRGMLQFMV KEIIRDLDQD GDKKLSLSEF ISLPVGTVEN ENSTTRP00000016131/1-362 SEFLSFLHPE HSRGMLQFMV KEIIRDLDQD GDKKLSLSEF ISLPVGTVEN bmy_10018T0/1-240 SEFLSFLHPE HSRGMLQFMV KEIIRDLDQD GDKKLSLSEF ISLPVGTVEN 301 350 BACU001183/1-391 QQGQDVDDGW VRDRKREFEE LIDANHDGIV TMAELEVLRG ACFSPSLDES ENSP00000353094/1-362 QQGQDIDDNW VKDRKKEFEE LIDSNHDGIV TAEELE---- ----SYMD-- ENSBTAP00000020778/1-254 QQGQDVDDSW VRDRKREFEE LIDANHDGIV TMAELE---- ----DYMD-- ENSTTRP00000016131/1-362 QQGQDVDDGW VRDRKREFEE LIDANRDGIV TAAELE---- ----DYMD-- bmy_10018T0/1-240 QQGQDVDDGW VRDRKREFEE LIDANHDGIV TMAELE---- ----DYMD-- 351 400 BACU001183/1-391 FHFSQNSLMP ADSWRDLWFR SSLPSALPSR RPSRSACVCP APGPAFSLSC ENSP00000353094/1-362 ---------P MNEYNAL--- NEAKQMIAVA DENQNHHLEP EEVLKYS--- ENSBTAP00000020778/1-254 ---------P MNEFSAL--- NEAKQMIAIA DENQNHYLEP EEVLKYS--- ENSTTRP00000016131/1-362 ---------P MNEFSAL--- NEAKQMIAVA DENQNHCLEP EEVLKYS--- bmy_10018T0/1-240 ---------P MNEFSAL--- NEAKQMIAIA DENQNHFLEP EEVLKYS--- 401 450 BACU001183/1-391 PSVAGHPDVG GELPMPVKAA WP ENSP00000353094/1-362 EFFTGSKLV- -DYARSVHEE F- ENSBTAP00000020778/1-254 EFFTGSKLV- -DYARSVHEE F- ENSTTRP00000016131/1-362 EFFTGSKLV- -DYARSVHEE F- bmy_10018T0/1-240 EFFTGSKLV- -DYARSVHEE F-