KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:36 2014 Check: 00 .. Name: ENSP00000371364/1-296 Len: 341 Check: 9644 Weight: 1.00 Name: ENSBTAP00000020782/1-312 Len: 341 Check: 4712 Weight: 1.00 Name: bmy_07383T0/1-231 Len: 341 Check: 4497 Weight: 1.00 Name: BACU007644/1-229 Len: 341 Check: 8687 Weight: 1.00 Name: ENSTTRP00000000609/1-297 Len: 341 Check: 9131 Weight: 1.00 // 1 50 ENSP00000371364/1-296 MTKTALLKLF VAIVITFILI LPEYFKTPKE RTLELSCLEV CLQSNFTYSL ENSBTAP00000020782/1-312 MTKTALLKLL LAIMIMFILI LPEYFKAPKG NMLELSCLEV YLQQNFSYSF bmy_07383T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU007644/1-229 MTNTAVLKLL LAIVITFILI LPEYFKTPN- ---------- ---------- ENSTTRP00000000609/1-297 MTNTALLKLL LAMVITFILI LPEYFKTPNR NTLELSCLEV CLQPNFTYSF 51 100 ENSP00000371364/1-296 SSLNFSFVTF LQPVRETQII MRIFLNPSNF RNFTRTCQDI TGEFKMCSSC ENSBTAP00000020782/1-312 FSINASFVTF LQPIKETQTI TGIFLNHSNF QNFTRICQDI TSELKTCFSC bmy_07383T0/1-231 ---------- ---------- MGIFLNHSSF QNFTRICQDI TSEFKTCSSC BACU007644/1-229 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000609/1-297 SSLNFSFVTF LQPIKETQTI MGIFLNHSSF QNFTRICQDI TSEFKMCSSC 101 150 ENSP00000371364/1-296 LVCESKGNMD FISQEQTSKV LIRRGSMEVK ANDFHSPCQH FNFSVAPLVD ENSBTAP00000020782/1-312 LACESKGNTD FIFQEQTSKV LIMRGSMEVK SNNFHSPCQH FNFTVTPTVD bmy_07383T0/1-231 LACEFKGNMD FISQEQTSKV LIMRGSMEVK ANDFHSPCQH FNFNVTPMVD BACU007644/1-229 -ACESKGNMD FISKEQTSKV LIMRGSTEVK ANDFHSPCQH FNFTVTPMVD ENSTTRP00000000609/1-297 LACESKGNMD FISQEQTSKV LIMRGSTEVK ANDFHSPCQH FNFTVTPVVD 151 200 ENSP00000371364/1-296 HLEEYNTTCH LKNHTGRSTI MEDEPSKEKS INYTCRIMEY PNDCIHISLH ENSBTAP00000020782/1-312 HLEEYNLTCN LKTHTGRSAI KEEDPTEATS INRTCRIMEH PHNCINISFH bmy_07383T0/1-231 HLEEYNITCN LKTHTRRSAI KEEDPTKETD INHTCRIMEH PNNCINISLH BACU007644/1-229 HLEEYNITCN LKTHTRRSAI KEEDPTKETD INHTCRIMEH PNNCINISLH ENSTTRP00000000609/1-297 HLEQCNITCN LKTHTRRSAI EEEDPNKETD INHTCRIMEH PTNCINISLH 201 250 ENSP00000371364/1-296 LEMDIKNITC SMKITWYILV LLVFIFLIIL TIRKILEGQR RVQKWQSHRD ENSBTAP00000020782/1-312 LEMDAKNSIC SMKITWYVLV LLVFIVLLIF IVNKILEGHR RVQKWQSHKY bmy_07383T0/1-231 LEMDVKNFIC SMKITWYVLV LLVFIFLLIF IIHKILEAHR RVQKWQGHKY BACU007644/1-229 LEMDVK---- ---------- ---------- ---------- ------SHKY ENSTTRP00000000609/1-297 LEMDVKYFIC SMKITWYVLV LLVFIFLLIF IIHKILEAHR RVQKWQGHKY 251 300 ENSP00000371364/1-296 KPTSVLLRGS DSEKLRALNV QVLSAETTQR LPLDQVQEVL PPIPEL---- ENSBTAP00000020782/1-312 EPTSTLLRGS DSEKLRTLNV RVIS-ETTKR LPMTPVKDVL PPIPELEVTS bmy_07383T0/1-231 KPTSVLLRGS DSEKLRTLNV QVISGE---- --FCDMQSTT YEIPTLHHSL BACU007644/1-229 KPTSVLLRGS DSEKLRTLNM QVISAETTQR LPMAQVKDAL PPIPELEVTS ENSTTRP00000000609/1-297 KPTSVLLRGS DSEKLRTLNV QVISAETMQK LPMAHVKDVL PPIPELE--- 301 350 ENSP00000371364/1-296 ---------- ---------- ---------- ---------- - ENSBTAP00000020782/1-312 AVPQQDQHTR LSL------- ---------- ---------- - bmy_07383T0/1-231 LSKHKIE--- ---------- ---------- ---------- - BACU007644/1-229 MAHQQDQYTR NALVYDVSDN VEFLNSYGSL MGSNQCMVAA A ENSTTRP00000000609/1-297 ---------- ---------- ---------- ---------- -