KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:37 2014 Check: 00 .. Name: ENSP00000253109/1-470 Len: 471 Check: 9299 Weight: 1.00 Name: ENSBTAP00000020787/1-427 Len: 471 Check: 2264 Weight: 1.00 Name: ENSTTRP00000004254/1-462 Len: 471 Check: 2589 Weight: 1.00 Name: bmy_13760T0/1-468 Len: 471 Check: 6123 Weight: 1.00 Name: BACU002513/1-412 Len: 471 Check: 3595 Weight: 1.00 // 1 50 ENSP00000253109/1-470 MGKPWLRALQ -LLLLLGASW ARAGAPRCTY TFVLPPQKFT GAVCWSGPAS ENSBTAP00000020787/1-427 MSAPRLLTMQ -LLLLLGAWW ARAAAPRCTY TFVLPPQKFT GAVCWSGPAA ENSTTRP00000004254/1-462 MSAPRLLTMQ -VLLLLDARW ARAAAPRCTY TFVLPPQKFT GAVCWSGPAA bmy_13760T0/1-468 MSAPRLLTMQ LLLLLLDAWW ARAAAPRCTY TFVLPPQKFT GAVCWSGPAA BACU002513/1-412 MSAPGLLTMQ -LLLLLDAWW ARAAAPRCTY TFVLPPQKFT GAVCWSGPAA 51 100 ENSP00000253109/1-470 TRATPEAANA SELAALRMRV GRHEELLREL QRLAAADGAV AGEVRALRKE ENSBTAP00000020787/1-427 ARPTPEAVNA SEVAALRVRV SRHEELLREL QRLATADGAV AGEVRALRKE ENSTTRP00000004254/1-462 PRPTPEAVNA SDVAALRVRV GRHEELLREL QRLATADGAV AGEVRALRKE bmy_13760T0/1-468 PRPTPEAVNA SDVAALRVRV GRHEELLREL QRLATADGAV AGEVRALRKE BACU002513/1-412 PRPTPEAVNA SDVAALRVRV GRHEELLREL QRLATADGAV AG-------- 101 150 ENSP00000253109/1-470 SRGLSARLGQ LRAQLQHEAG PGAGPGADLG AEPAAALALL GERVLNASAE ENSBTAP00000020787/1-427 SRGLSARLGQ LRAQLQHEAG PGAAPS--PG AEPASALALL GDRVLNASAE ENSTTRP00000004254/1-462 SRGLSSRLGQ LRAQLQHEAG PGAGLG--LG AEPAAALALL GERVLNASAE bmy_13760T0/1-468 SRGLSARLGQ LRAQLQHEAG PGAGLG--LG AEPAAALALL GERVLNASAE BACU002513/1-412 ---------- ---------- ---------- ---------- ---------E 151 200 ENSP00000253109/1-470 AQRAAARFHQ LDVKFRELAQ LVTQQSSLIA RLERLCPGGA GGQQQVLPPP ENSBTAP00000020787/1-427 AQRAAARFHQ LDVKFRELAQ LVSQQSGLIA RLERLCPGSA GGQQQVL-PP ENSTTRP00000004254/1-462 AQRAAARFHQ LDVKFRELAQ LVSQQSGLIS RLERLCPGSA GGQQQVL-PP bmy_13760T0/1-468 AQRAAARFHQ LDVKFRELAQ LVSQQSGLIS RLERLCPGSA GGQQQVL-PP BACU002513/1-412 AQRAAARFHQ LDVKFRELAQ LVSQQSGLIS RLERLCPGSA GGQQQVL-PP 201 250 ENSP00000253109/1-470 PLVPVVPVRL VGSTSDTSRM LDPAPEPQRD QTQRQQEPMA SPMPAGHPAV ENSBTAP00000020787/1-427 PLVPVVPVSL VGGTDDTGRR LNSAAEPQRD QTLRQPGPLA SPLPLGHPAV ENSTTRP00000004254/1-462 PLVPVVPVSL VGGTNDTSRR MNSAPESQRD QTLRQQGPLA SPVPSGHPAV bmy_13760T0/1-468 PLVPVVPVSL VGGTNDTSRR LNSAPESQRD QTLRQQGPLA SPVPSGHPAV BACU002513/1-412 PLVPVVPVSL VGGTNDTSRR LNSAPESQRD QTLRQQGPLA SPVPSGHPAV 251 300 ENSP00000253109/1-470 PTKPVGPWQD CAEARQAGHE QSGVYELRVG RHVVSVWCEQ QLEGGGWTVI ENSBTAP00000020787/1-427 PPKPAGPWQD CAEARQAGHG QSGVYELRVG ---------- ---------- ENSTTRP00000004254/1-462 PTKPAGPWRD CAEARQAGHG QSGVYELRVG RHVLSAWCEQ QLEGGGWTVI bmy_13760T0/1-468 PTKPAGPWRD CAEARQAGHG RSGVYELRVG RHVMSAWCEQ QLEGGGWTVI BACU002513/1-412 PTKPAGPWRD CAEARQAGHG RSGVYELRVG RHVMSAWCEQ QLEGGGWTVI 301 350 ENSP00000253109/1-470 QRRQDGSVNF FTTWQHYKAG FGRPDGEYWL GLEPVYQLTS RGDHELLVLL ENSBTAP00000020787/1-427 ---------- ---------- FGQPDGEYWL GLEPVHQLTS RGDHELLVLL ENSTTRP00000004254/1-462 QRRQDGSVNF FTTWQHYKVG FGQPDGEYWL GLEPVHQLTS HGDHELLVLL bmy_13760T0/1-468 QRRQDGSVNF FTTWQHYKVG FGQPDGEYWL GLEPVHQLTS HGDHELLVLL BACU002513/1-412 QRRQDGSVNF FTTWQHYKTG FGQPDGEYWL GLEPVHQLTS HGDHELLVLL 351 400 ENSP00000253109/1-470 EDWGGRGARA HYDGFSLEPE SDHYRLRLGQ YHGDAGDSLS WHNDKPFSTV ENSBTAP00000020787/1-427 EDWGGRGARA HYDGFSLEPE SDHYRLRLGQ YHGDAGDSLS WHNDKPFSTV ENSTTRP00000004254/1-462 EDWGGRGARA HYDGFSLEPE SDHYRLRLGH YHGDAGDSLS WHNDKPFSTV bmy_13760T0/1-468 EDWGGRGARA HYDGFSLEPE SDHYRLRLGH YHGDAGDSLS WHNDKPFSTV BACU002513/1-412 EDWGGRGARA HYDGFSLEPE SDHYRLRLGH YHGDAGDSLS WHNDKPFSTV 401 450 ENSP00000253109/1-470 DRDRDSYSGN CALYQRGGWW YHACAHSNLN GVWHHGGHYR SRYQDGVYWA ENSBTAP00000020787/1-427 DRDRDSYSGN CALYQRGGWW YHACAHSNLN GVWHRGGHYR SRYQDGVYWA ENSTTRP00000004254/1-462 DRDRDSYSGN CA-YQRGGWW Y-ACASN--N GVWHRGGHYR SRY-DGVYWA bmy_13760T0/1-468 DRDRDSYSGN CALYQRGGWW YHACAHSNLN GVWHRGGHYR SRYQDGVYWA BACU002513/1-412 DRDRDSYSGN CALYQRGGWW YHACAHSNLN GVWHRGGHYR SRYQDGVYWA 451 500 ENSP00000253109/1-470 EFRGGAYSLR KAAMLIRPLK L ENSBTAP00000020787/1-427 EFRGGAYSLK KAAMLIRPLR P ENSTTRP00000004254/1-462 EFRGGAYSLK KVAMLIRPLR L bmy_13760T0/1-468 EFRGGAYSLK KAAMLIRPLR L BACU002513/1-412 EFRGGAYSLK KAAMLIRPLR L