KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:37 2014 Check: 00 .. Name: bmy_18952T0/1-243 Len: 356 Check: 6770 Weight: 1.00 Name: ENSBTAP00000020790/1-355 Len: 356 Check: 4547 Weight: 1.00 Name: ENSTTRP00000011230/1-350 Len: 356 Check: 2222 Weight: 1.00 Name: ENSP00000222381/1-355 Len: 356 Check: 7281 Weight: 1.00 // 1 50 bmy_18952T0/1-243 ---------- -----FFLS- ----QNKKEC FPRVKLVELP NCKLGKGIQT ENSBTAP00000020790/1-355 MAKLLVLTLL GLGLAFFRDY RSSYLARMNA SREVKSVELP NCKLIKGIET ENSTTRP00000011230/1-350 MAKLTVLT-L RLGLALFRDH RSSYLTRKNA SQE-KLVELP NCKLGKGIET ENSP00000222381/1-355 MAKLIALTLL GMGLALFRNH QSSYQTRLNA LREVQPVELP NCNLVKGIET 51 100 bmy_18952T0/1-243 GSEDLEILRN GLAFISS--- FSHVKAFR-- ---------- ---------- ENSBTAP00000020790/1-355 GAEDLEILPN GLAFISSGLR YPGVKSFEPD KPGKILLMDL NKEDPTVLEL ENSTTRP00000011230/1-350 GSEDLEILRN GLAFISSGLK YPGIKSFEPN KPGKILLTDM NEEDTTVLEL ENSP00000222381/1-355 GSEDLEILPN GLAFISSGLK YPGIKSFNPN SPGKILLMDL NEEDPTVLEL 101 150 bmy_18952T0/1-243 -----RLTAS KGKDYGLTSL A--DNTXYLL VVNHPDFKST VELFKFQEEE ENSBTAP00000020790/1-355 KMTGSNFDAS SFNPHGISTF TDEDNTVYLL VVSHPDVKST VELFKFQEEE ENSTTRP00000011230/1-350 RITGSNFDSS SFNPHGISTF TNEDNTVYLL VVNHPDFKST VELFKFQEEE ENSP00000222381/1-355 GITGSKFDVS SFNPHGISTF TDEDNAMYLL VVNHPDAKST VELFKFQEEE 151 200 bmy_18952T0/1-243 KSLSHLKTIK HKLLPNLNGI VGVGPEHFYA INDHYFVDPY LRSWELYLGL ENSBTAP00000020790/1-355 KSLLHLKTIK HELLPNLNDL VAVGREHFYA TNDHYFVDQY MRSWELYLGL ENSTTRP00000011230/1-350 KSLLHLKTIK HKLLPNLNGI VGVGPEHFCA IGDHYLVDPY LRSWELYLGL ENSP00000222381/1-355 KSLLHLKTIR HKLLPNLNDI VAVGPEHFYG TNDHYFLDPY LQSWEMYLGL 201 250 bmy_18952T0/1-243 ASSFVVYYSP NEVRVVASGF DFAVEST--- ---------- ---------S ENSBTAP00000020790/1-355 AWSNVVYYSP DDVRVVASGF DFANGISMSP DRKYVYIAEL LAHKIHVYEK ENSTTRP00000011230/1-350 ACSFVVYYGP NEVRVVASGL DFA-GINISP DGKYVYISEV LAHKIHVYEK ENSP00000222381/1-355 AWSYVVYYSP SEVRVVAEGF DFANGINISP DGKYVYIAEL LAHKIHVYEK 251 300 bmy_18952T0/1-243 HLTATLSSLK KPLDFNTLMG NVSEDPMTGD LWVGRHLNGM KIFFYDPENP ENSBTAP00000020790/1-355 HANWTLTPL- KSLDCDTLVD NISVDPVTGD LWVGCHPNGM KIFSYDPENP ENSTTRP00000011230/1-350 HTNWTLTPL- KPLDFNTLMD NISEDPVTGD LWVGRHPNGT KIFFYDPENP ENSP00000222381/1-355 HANWTLTPL- KSLDFNTLVD NISVDPETGD LWVGCHPNGM KIFFYDSENP 301 350 bmy_18952T0/1-243 TGSEV-SLQN ---------- ---------- ---------- --------ES ENSBTAP00000020790/1-355 PGSEVLQIQN ILAEEPKVTV VYAEDGKVLH GSTVASVYKG KMLVGTVFQK ENSTTRP00000011230/1-350 TGSEVLQIQK IL-EEPKVTV V-AENGTVLR GSTVASVYKG KLLIGTVFHT ENSP00000222381/1-355 PASEVLRIQN ILTEEPKVTQ VYAENGTVLQ GSTVASVYKG KLLIGTVFHK 351 400 bmy_18952T0/1-243 CQWLKI ENSBTAP00000020790/1-355 ALYCEF ENSTTRP00000011230/1-350 ALYCEL ENSP00000222381/1-355 ALYCEL