KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:38 2014 Check: 00 .. Name: ENSP00000418287/1-339 Len: 386 Check: 7976 Weight: 1.00 Name: ENSBTAP00000020797/1-339 Len: 386 Check: 7855 Weight: 1.00 Name: ENSTTRP00000004695/1-342 Len: 386 Check: 6699 Weight: 1.00 Name: bmy_06899T0/1-286 Len: 386 Check: 4210 Weight: 1.00 Name: BACU018961/1-339 Len: 386 Check: 6681 Weight: 1.00 // 1 50 ENSP00000418287/1-339 ---------- ---------- ---------- ---------- ----MKDSLV ENSBTAP00000020797/1-339 ---------- ---------- ---------- ---------- ----MKDSLV ENSTTRP00000004695/1-342 ---------- ---------- ---------- ---------- ----MKDSLV bmy_06899T0/1-286 TAEAAGALVP RRTSALRRKR ICVVGAAVGA AGSAHLCLLL SRAAMKDSLV BACU018961/1-339 ---------- ---------- ---------- ---------- ----MKDSLV 51 100 ENSP00000418287/1-339 LLGRVPAHPD SRCWFLAWNP AGTLLASCGG DRRIRIWGTE GDSWICKSVL ENSBTAP00000020797/1-339 LLSRILAHPD SRCWFLAWNP AGTLLASCGG DRSVRIWGRE GDSWICKSVL ENSTTRP00000004695/1-342 LLGRILAHPD SRCWFLAWNP AGTLLASCGG DRSVRIWGRE GDSWICKSVL bmy_06899T0/1-286 LLGRILAHPD SRCWFLAWSP AGTLLASCGG DRSVRIWGRE GDSWICKSVL BACU018961/1-339 LLGRILAHPD SRCWFLAWNP AGTLLASCGG DRSVRIWGRE GGSWICKSVL 101 150 ENSP00000418287/1-339 SEGHQRTVRK VAWSPCGNYL ASASFDATTC IWKKNQDDFE CVTTLEGHEN ENSBTAP00000020797/1-339 CEGHQRTVRK VAWSPCGNYL ASASFDATTC IWKKNEDDFE CVTTLEGHEN ENSTTRP00000004695/1-342 CEGHQRTVRK VAWSPCGNYL ASASFDATTC IWKKKNDDFE CVTTLEGHEN bmy_06899T0/1-286 CEGHQRTVRK VAWSPCGNYL ASASFDATTC IWKKKDDDFE CVTTLEGHEN BACU018961/1-339 CEGHQRTVRK VAWSPCGNYL ASASFDATTC IWKKKDDDFE CVTTLEGHEN 151 200 ENSP00000418287/1-339 EVKSVAWAPS GNLLATCSRD KSVWVWEVDE EDEYECVSVL NSHTQDVKHV ENSBTAP00000020797/1-339 EVKSVAWAPS GNLLATCSRD KSVWVWEVDE EDEYECVSVL NSHTQDVKHV ENSTTRP00000004695/1-342 EVKSVAWAPS GNLLATCSRD KSVWVWEVDE EDEYECVSVL NSHTQDVKHV bmy_06899T0/1-286 EVKSVAWAPS GNLLATCSRD KSVWVWE--- ---------- ---------- BACU018961/1-339 EVKSVAWAPS GNLLATCSRD KSVWVWEVDE EDEYECVSVL NSHTQDVKHV 201 250 ENSP00000418287/1-339 VWHPSQELLA SASYDDTVKL YR---EEEDD WVCCATLEGH ESTVWSLAFD ENSBTAP00000020797/1-339 VWHPSQELLA SASYDDTVKL YR---EEEDD WVCCATLEGH ESTVWSLAFD ENSTTRP00000004695/1-342 VWHPSQELLA YASYDDTVKL YREEGEEEDD LVCFATLEGH ESTVRSVAFD bmy_06899T0/1-286 ---------- ---------- ---------- ---------- ---------- BACU018961/1-339 VWHPSQELLA SASYDDTVKL YR---EEEDD WVCCATLEGH ESTVWSLAFD 251 300 ENSP00000418287/1-339 PSGQRLASCS DDRTVRIWRQ YLPGNEQGVA CSGSDPSWKC ICTLSGFHSR ENSBTAP00000020797/1-339 PSGQRLASCS DDRTVRIWRQ YLPGNEQGVA CSGSEASWKC VCTLSGFHSR ENSTTRP00000004695/1-342 PSGQRLASSS DDRTVRIWHQ YLPGNEQGVA CSGSDPSWKC ICTLSGFHSR bmy_06899T0/1-286 ---------- ---------- -------GVA CSGSDPSWKC ICTLSGFHSR BACU018961/1-339 PSGQRLASCS DDRTVRIWHQ YLPGNEQGVA CSGSDPSWKC ICTLSGFHSR 301 350 ENSP00000418287/1-339 TIYDIAWCQL TGALATACGD DAIRVFQEDP NSDPQQPTFS LTAHLHQAHS ENSBTAP00000020797/1-339 TIYDVAWCQL TGTLATACGD DAIRVFEEDP GSDPQQPTFS LTAHVPQAHS ENSTTRP00000004695/1-342 TIYDVAWCQL TGALATACGD DAIRVFEEDP GSDLQQPTFS VTAHVPQAHS bmy_06899T0/1-286 TIYDVAWCQL TGALATACGD DAIRVFEEDP GSDLLQPTFS VTAHVPQAHS BACU018961/1-339 TIYDVAWCQL TGALATACGD DAIRVFEEDP GSDLQQPTFS VTAHVPQAHS 351 400 ENSP00000418287/1-339 QDVNCVAWNP KEPGLLASCS DDGEVAFWKY QRPEGL ENSBTAP00000020797/1-339 QDVNCVAWNP KERGLLASCS DDGELAFWKY QPSEGI ENSTTRP00000004695/1-342 QDVNCVAWNP KERGLLASCS DDGELAFWKY QLSEGL bmy_06899T0/1-286 QDVNCVAWNP KERGLLASCS DDGELAFWKY QPSEGL BACU018961/1-339 QDVNCVAWNP KERGLLASCS DDGELAFWKY QPSEGL