KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:39 2014 Check: 00 .. Name: ENSP00000342560/1-445 Len: 460 Check: 8836 Weight: 1.00 Name: bmy_20335T0/1-377 Len: 460 Check: 7847 Weight: 1.00 Name: ENSBTAP00000020802/1-365 Len: 460 Check: 9480 Weight: 1.00 Name: ENSTTRP00000010495/1-457 Len: 460 Check: 2405 Weight: 1.00 // 1 50 ENSP00000342560/1-445 MERAPPDGPL NASGALAGEA AAA--GGARG FSAAWTAVLA ALMALLIVAT bmy_20335T0/1-377 HGPPRPSSPT ---------- ---------- ---------- ---------- ENSBTAP00000020802/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010495/1-457 MERSPPDGPL NASGALAGEA AAAAAGGARG FSAAWTAVLA ALMALLIVAT 51 100 ENSP00000342560/1-445 VLGNALVMLA FVADSSLRTQ NNFFLLNLAI SDFLVGAFCI PLYVPYVLTG bmy_20335T0/1-377 ---------- ---------- ---------- -----GAFCI PLYVPYVLTG ENSBTAP00000020802/1-365 ---------- ---------- ---------- -----GAFCI PLYVPYVLTG ENSTTRP00000010495/1-457 VLGNALVMLA FVADSSLRTQ NNFFLLNLAI SDFLVGAFCI PLYVPYVLTG 101 150 ENSP00000342560/1-445 RWTFGRGLCK LWLVVDYLLC TSSAFNIVLI SYDRFLSVTR AVSYRAQQGD bmy_20335T0/1-377 RWPFGRGLCK LWLVADYLLC ASSVFSIVLI SYDRFLSVTR AVSYRAQQGD ENSBTAP00000020802/1-365 RWPFGRGLCK LWLVVDYLLC TSSVFNIVLI SYDRFLSVTR AVSYRAQQGD ENSTTRP00000010495/1-457 RWPFGRGLCK LWLVVDYLLC TSSVFNIVLI SYDRFLSVTR AVSYRAQQGD 151 200 ENSP00000342560/1-445 TRRAVRKMLL VWVLAFLLYG PAILSWEYLS GGSSIPEGHC YAEFFYNWYF bmy_20335T0/1-377 TRRAVRKMVL VWVLAFLLYG PAILSWEYLS GGSSIPEGHC YAEFFYNWYF ENSBTAP00000020802/1-365 TRRAVQKMVL VWVLAFLLYG PAILSWEYLS GGSSIPEGHC YAEFFYNWYF ENSTTRP00000010495/1-457 TRRAVRKMVL VWVLAFLLYG PAILSWEYLS GGSSIPEGHC YAEFFYNWYF 201 250 ENSP00000342560/1-445 LITASTLEFF TPFLSVTFFN LSIYLNIQRR TRLRLDGARE AAGPEPPPEA bmy_20335T0/1-377 LITASTLEFF TPFLSVTFFN LSIYLNIQRR TRVRLDGACE AAASELSPEA ENSBTAP00000020802/1-365 LITASTLEFF TPFLSVTFFN LSIYLNIQRR TRVRLDGVRE AATTELPPEA ENSTTRP00000010495/1-457 LITASTLEFF TPFLSVTFFN LSIYLNIQRR TRVRLDGARE AAASELPPEA 251 300 ENSP00000342560/1-445 QPSPPP-PPG CWGCWQKGHG EAMPLHRYGV --GEAAV--G AEAGEATLGG bmy_20335T0/1-377 RPSPPPAAPS CWDCWQKGCG EAVPLHRRGV RGGEAAPGTG AEAGDAALGG ENSBTAP00000020802/1-365 QPSPPPAAPS CWGCWQKGCG EAVPLHRYGV --GVSEVTPG PEAGEVALGG ENSTTRP00000010495/1-457 QPSPSPAAPS CWDCWQKGCG EAVPLHRCGV --GEAAPGTG AEAGDAALGG 301 350 ENSP00000342560/1-445 GGGGGSVASP TSSSGSSSRG TERPRSLKRG SKPSASSASL EKRMKMVSQS bmy_20335T0/1-377 GSGGGAAASP TSSSGSSSRG TERPRSLKRG SKPSTSSASL EKRVKMVSQS ENSBTAP00000020802/1-365 GSGGGAAASP TSSSGSSSRG TERPRSLKRG SKPSASSASL EKRMKMVSQS ENSTTRP00000010495/1-457 GS-GGAAASP TSSSGSSSRG AERPRSLKRG SKPSVSSASL EKRTKMVSQS 351 400 ENSP00000342560/1-445 FTQRFRLSRD RKVAKSLAVI VSIFGLCWAP YTLLMIIRAA CHGHCVPDYW bmy_20335T0/1-377 IAQRFRLSRD KKVAKSLAII VSIFGLCWAP YTLLMIIRAA CHGPCVPDYW ENSBTAP00000020802/1-365 ITQRFRLSRD KKVAKSLAVI VSIFGLCWAP YTLLMIIRAA CHGHCIPDYW ENSTTRP00000010495/1-457 IAQRFRLSRD KKVAKSLAVI VSTFGLCWAP YTLLMITRAA CHGPCVPDYW 401 450 ENSP00000342560/1-445 YETSFWLLWA NSAVNPVLYP LCHHSFRRAF TKLLCPQKLK IQPHSSLEHC bmy_20335T0/1-377 YETSFWLLWA NSAVNPVLYP LCHHSFRRAF TKLLCPQKLK MQPPSSLEHC ENSBTAP00000020802/1-365 YETSFWLLWA NSAVNPVLYP LCHYSFRRAF TKLLCPQKLK IQPHSSLEHC ENSTTRP00000010495/1-457 YEMSFWLLWA NSAVNPVLYP LCHYSFRRAF TKLLCPQKLK VQPPSSLEHC 451 500 ENSP00000342560/1-445 WK-------- bmy_20335T0/1-377 WK-------- ENSBTAP00000020802/1-365 WK-------- ENSTTRP00000010495/1-457 WKREKKKTHP