KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:40 2014 Check: 00 .. Name: ENSP00000386292/1-417 Len: 427 Check: 3362 Weight: 1.00 Name: ENSBTAP00000020811/1-425 Len: 427 Check: 7485 Weight: 1.00 Name: bmy_12556T0/1-426 Len: 427 Check: 402 Weight: 1.00 Name: ENSTTRP00000000226/1-213 Len: 427 Check: 8279 Weight: 1.00 // 1 50 ENSP00000386292/1-417 MGPRQGRWWL LLWLPPLATL P---VRGEAA AAALSVRRCK ALKEKDLIRT ENSBTAP00000020811/1-425 --LTPETCWL LLWLPPLAAQ PAGGERGEEE AAAVSVSTCQ VLKEMKIIKA bmy_12556T0/1-426 MRPPPGTCWL LLWLPPLAVL PAGAVRGEEN EAALSVPRCK ALKEMDLIKT ENSTTRP00000000226/1-213 MRPSPGTCWL LFWLPPLAVL PADAVRGEED EAALSVARCK ALKEMDLIKT 51 100 ENSP00000386292/1-417 SESDCYCYNQ NSQVEWKYIW STMQVKITSP GLFRIVYIAE RHNCQYPENI ENSBTAP00000020811/1-425 SLSGCYCYNQ NSQVQWKYIW STVQVKINSS DLFNVVYITE RYNCQYPETI bmy_12556T0/1-426 SQSDCYCYNQ KSQVKWKYIW STVQVKISSS GLLSIVYITE RYNCQYPETI ENSTTRP00000000226/1-213 SQSDCYCYNQ KSQVKWKYIW STVQVKITSS GLLSIVYITE RYNCQYPETI 101 150 ENSP00000386292/1-417 LSFIKCVIHN FWIPKESNEI TIIINPYRET VCFSVEPVKK IFNYMIHVNR ENSBTAP00000020811/1-425 LSIIRCMIHN FWTPEESNDI TITIHPYGQT VCFSVKPARK IFIYTISVKQ bmy_12556T0/1-426 LSIIKCVIHN FWTPKESNDI TITINPYGET VCFSVKPARK IFIYTVSVNR ENSTTRP00000000226/1-213 LSIIKCVIHN LWTPKESNDI TITINPYRET VCFSVKPARK IFIYTVRVNR 151 200 ENSP00000386292/1-417 NIMDFKLFLV FVAGVFLFFY ARTLSQSPTF YYSSGTVLGV LMTLVFVLLL ENSBTAP00000020811/1-425 NIVDFKLVFV FVVGIFLFFY AKTLSRSPVF FYSSGTVLGV LMTLVFVLLL bmy_12556T0/1-426 NIVDFKLFLV FMAGIFLFFY AKTLSQSPVF FYSSGTMLGI LMTLVFVLLL ENSTTRP00000000226/1-213 NIVDFKLFLV FVAGIFLFFY AKTLSQSPVF FYSSGTVLGI LMTLVFVLLL 201 250 ENSP00000386292/1-417 VKRFIPKYST FWALMVGCWF ASVYIVCQLM EDLKWLWYEN RIYVLGYVLI ENSBTAP00000020811/1-425 VKKFIPKYST FWALMLGCWF ASVYILGQLM EELKRLWYEG RICVLGYILT bmy_12556T0/1-426 VKKFIPKYST FWALMVGCWF ASVYVVWQLM EDLKWLWCEN RIYILGYVLV ENSTTRP00000000226/1-213 VKKFIPKFI- ---------- ---------- ------LCGN ---------- 251 300 ENSP00000386292/1-417 VGFFSFVVCY KHGPLADDRS RSLLMWMLRL LSLVLVYAGV AVPQFAY-AA ENSBTAP00000020811/1-425 VGCVSFAVCY KHGPLVEERS VVLLAWLLRL LSLLLVYMGV SAPQFACTAA bmy_12556T0/1-426 VGCVSFTVCY KHGPLVEERS RTLLAWTLQL LSLLLVYAGV AIPQVAC-AV ENSTTRP00000000226/1-213 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000386292/1-417 IILLMSSWSL HYPLRACSYM RWKMEQWFTS KELVVKYLTE DEYREQADAE ENSBTAP00000020811/1-425 LLLFLSSGSR CYPRSVLACV GRKMKKWFTS EKPAVKFLTE DEYREQADAA bmy_12556T0/1-426 MLLVLSSKVL HYPLRALAYV RWKMKKWFTS EKLVVKFLTE DEYREQADAA ENSTTRP00000000226/1-213 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000386292/1-417 TNSALEELRR ACRKPDFPSW LVVSRLHTPS KFADFVLGGS HLSPEEISLH ENSBTAP00000020811/1-425 TTCALEELRQ ACRSPGFPSW LAVSRLQEPK KFADFVLGGS HLSPEEVRLH bmy_12556T0/1-426 TTRALEDLRQ ACCSPGFPSW LAVSRLRAPK TFADFVLGGS HLSPEEIRLH ENSTTRP00000000226/1-213 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000386292/1-417 EEQYGLGGAF LEEQLFNPST A------ ENSBTAP00000020811/1-425 EEQYGLGGAF LEEQLFHLRT PDSLPAQ bmy_12556T0/1-426 EEQYGLAGAF LEEQLFNLRT PDSLPAH ENSTTRP00000000226/1-213 ---------- ---------- -------