KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:40 2014 Check: 00 .. Name: ENSP00000265132/1-352 Len: 427 Check: 1981 Weight: 1.00 Name: ENSBTAP00000020817/1-352 Len: 427 Check: 1646 Weight: 1.00 Name: ENSTTRP00000005079/1-352 Len: 427 Check: 3404 Weight: 1.00 Name: bmy_05212T0/1-238 Len: 427 Check: 8793 Weight: 1.00 Name: BACU007315/1-427 Len: 427 Check: 812 Weight: 1.00 // 1 50 ENSP00000265132/1-352 MRSLGALLLL LSACLAVSAG PVPTPPDNIQ VQENFNISRI YGKWYNLAIG ENSBTAP00000020817/1-352 MRSLSGLLLL LTACLVVNAS SVPTLPDDIQ VQENFDLSRI YGKWFNVAVG ENSTTRP00000005079/1-352 MQSLRALLLQ LTACLAVSAS PVTTLPDDIQ VQENFDLSRI YGKWFHVAVG bmy_05212T0/1-238 MRSLGALLLL LTACLAVSAS PVTTLPDDIQ VQENFDLSRI YGKWFHVAVG BACU007315/1-427 MRSLGALLLL LTTCLAVSAS PVTTLPDDIQ VQENFDLSRI YGKWFHVAVG 51 100 ENSP00000265132/1-352 STCPWLKKIM DRMTVSTLVL GEGATEAEIS MTSTRWRKGV CEETSGAYEK ENSBTAP00000020817/1-352 STCPWLKRFK EKMTMSTVVL KAGPTSKEIS VTNTHRRKGV CESISGTYEK ENSTTRP00000005079/1-352 STCPWLKRFK DKMTMSSLVL GEGATDREIS VTNTHWRKGV CEAISGAYEK bmy_05212T0/1-238 STCPWLKRFK DKMTMSSLVL GEGATDREIS VTNTHWRKGV CEAISGAYEK BACU007315/1-427 STCPWLKRFK DKMTMSSLVL GEGATDREIS VTNTHWRKGV CEAISGAYEK 101 150 ENSP00000265132/1-352 TDTDGKFLYH KSKWNITMES YVVHTNYDEY AIFLTKKFSR HHGPTITAKL ENSBTAP00000020817/1-352 TSTDGKFLYH KAKWNITMES YVVHTNYDEY AIFLTKKLSR RHGPTITVKL ENSTTRP00000005079/1-352 TGTDGKFFYH KPKWNITMES YVVHTNYDEY AIFLTKKFSH RHGPTITAKL bmy_05212T0/1-238 TGTDGKFVYH KPKWNITMES YVVHTNYDEY AIFLTKKFSR RHGPTITAKL BACU007315/1-427 TGTDGKFVYH KPKWNITMES YVVHTNYDEY AIFLTKKFSR RHGPTITAKL 151 200 ENSP00000265132/1-352 YGRAPQLRET LLQDFRVVAQ GVGIPEDSIF TMADRGECVP GEQEPEPILI ENSBTAP00000020817/1-352 YGREPQLRES LLEEFREVAL GVGIPEDAIF TMPDRGECVP GEQDPVPTPV ENSTTRP00000005079/1-352 YGREPQLRET LLEQFREVAL GVGIPEDSIF RMPDRGECVP GEQEPAPTPL bmy_05212T0/1-238 YGREPQLRET LLEQFREVAL GVGIPEDAIF TMPDRGECVP GEQEPAPSPL BACU007315/1-427 YGREPQLRET LLEQFREVAL GVGIPEDAIF TMPERGECVP GEQEPAPAPL 201 250 ENSP00000265132/1-352 PRVRRAVLPQ EEEGSGGGQL VTEVTKKEDS CQLGYSAGPC MGMTSRYFYN ENSBTAP00000020817/1-352 SRARRAVLTQ EEEGSGAGQP VTNFSKKADS CQLDYSQGPC LGLFKRYFYN ENSTTRP00000005079/1-352 SXXXXXXXXX XXXXXXXXXX XXXXXXXXXS CQLGYSQGPC LGMIQRYFYN bmy_05212T0/1-238 SRAQRSVLPQ EEEGSGAGQL ITDFGKKE-- ---------- ---------- BACU007315/1-427 SRAQRSVLPQ EEEGSGAGQL VTDFGKKEDS CQLGYSQGPC LGMIQRYFYN 251 300 ENSP00000265132/1-352 GTSMACETFQ YGGCMGNGNN FVTEKECLQT CRTVAACNLP IVRGPCRAFI ENSBTAP00000020817/1-352 GTSMACETFL YGGCMGNGNN FLSEKECLQT CRTVEACNLP IVQGPCRSYI ENSTTRP00000005079/1-352 GSSMACETFH YGGCMGNGNN FVSEKECLQT CRTVEACNLP IVPGPCRGST bmy_05212T0/1-238 ---------- ---------- ---------- ---------- -------GDE BACU007315/1-427 GSSMACETFH YGGCMGNGNN FVSEKECLQT CRTVEACNLP IVPGPCRGST 301 350 ENSP00000265132/1-352 QLWAFDAVKG KCVLFPYGGC QGNGNKFYSE KECREYCGVP GDGDEELLRF ENSBTAP00000020817/1-352 QLWAFDAVKG KCVRFSYGGC KGNGNKFYSE KECKEYCGIP GEADEELLRF ENSTTRP00000005079/1-352 QLWAFDAVKG KCVLFIYGGC KGNSNQFYSE KECKEYCGIP GEGEEELLRF bmy_05212T0/1-238 ELL------- ---------- ---------- ---------- --------RF BACU007315/1-427 QLWAFDAVKG KCVLFIYGGC KGNSNQFYSE KECKEYCGIP GEEPPPSVYF 351 400 ENSP00000265132/1-352 SN-------- ---------- ---------- ---------- ---------- ENSBTAP00000020817/1-352 SN-------- ---------- ---------- ---------- ---------- ENSTTRP00000005079/1-352 SS-------- ---------- ---------- ---------- ---------- bmy_05212T0/1-238 SN-------- ---------- ---------- ---------- ---------- BACU007315/1-427 AHSCIPSSSC QGLEGLGLFL HKGPGDPISW DPRSGPLPRK ENGHCPLRCA 401 450 ENSP00000265132/1-352 ---------- ---------- ------- ENSBTAP00000020817/1-352 ---------- ---------- ------- ENSTTRP00000005079/1-352 ---------- ---------- ------- bmy_05212T0/1-238 ---------- ---------- ------- BACU007315/1-427 QNNQLALDRS WKPWVWSGFC SLEEESR