KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:42 2014 Check: 00 .. Name: ENSP00000352427/1-295 Len: 296 Check: 6840 Weight: 1.00 Name: ENSBTAP00000020822/1-291 Len: 296 Check: 8938 Weight: 1.00 Name: ENSTTRP00000014288/1-253 Len: 296 Check: 3169 Weight: 1.00 Name: bmy_17953T0/1-267 Len: 296 Check: 5188 Weight: 1.00 Name: BACU005464/1-161 Len: 296 Check: 403 Weight: 1.00 // 1 50 ENSP00000352427/1-295 MAETSALPTG FGELEVLAVG MVLLVEALSG LSLNTLTIFS FCKTPELRTP ENSBTAP00000020822/1-291 MAESGTLPTG FGELEVLAVG TVLLVEALSG LSLNILTILS FCKTPELRTP ENSTTRP00000014288/1-253 MAESGTLPTG FGELEVLAVG TVLLVEALSG LSLNSLTILC FCKNPELRTP bmy_17953T0/1-267 MAESGTLPTG FGELEVLAVG TVLLVEALSG LGLNSLTILC FCKNPELRTP BACU005464/1-161 MAESGTLPTG FGELEVLAVG TVLLVEALSG LGLNSLTILC FCKNPELRTP 51 100 ENSP00000352427/1-295 CHLLVLSLAL ADSGISLNAL VAATSSLLR- VSHRRWPYGS DGCQAHGFQG ENSBTAP00000020822/1-291 SHLLVLSLAL ADSGISLNAL VAATSSLL-- ---RRWPYGS EGCQAHGFQG ENSTTRP00000014288/1-253 SHLLVLSLAL SDSGISLNAL MAATSSLLRY VSHRRWPYGS EGCQVHGFQG bmy_17953T0/1-267 SHLLVLSLAL SDSGISLNAL IAATSSLL-- ---RRWPYGS EGCQAHGFQG BACU005464/1-161 SHLLVLSLAL SDSGISLNAL IAATSSLL-- ---------- ---------- 101 150 ENSP00000352427/1-295 FVTALASICS SAAIAWGRYH HYCTRSQLAW NSAVSLVLFV WLSSAFWAAL ENSBTAP00000020822/1-291 FVTALASICS SAAVAWGRYH HFCTRSRLDW NTAVSLVFFV WLSSAFWAAL ENSTTRP00000014288/1-253 FATVLASICS SAAIAWGRYH HYCTRSRLDW NTAVSLVFFV WLSSAFWATL bmy_17953T0/1-267 FATALASICS SAAIAWGRYH HYCT------ ---------- --------PL BACU005464/1-161 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000352427/1-295 PLLGWGHYDY EPLGTCCTLD YSKGDRNFTS FLFTMSFFNF AMPLFITITS ENSBTAP00000020822/1-291 PLLGWGHYDY EPLGTCCTLD YSRGDRNFTS FLFTMAFFNF LLPLFITVVS ENSTTRP00000014288/1-253 PLLGWGHYDR EPLGTCCTLD YSRRDRNFTS FLFTMAFFNF LLPLFITVIS bmy_17953T0/1-267 PLLGWGHYDY EPLGTCCTLD YSRGDRNFTS FLFTMAFFNF LLPLFITVIS BACU005464/1-161 ---------- ---------- -----RNFTS FLFTMAFFNF LLPLFITVIS 201 250 ENSP00000352427/1-295 YSLMEQKLGK SGHLQVNTTL PARTLLLGWG PYAILYLYAV IADVTSISPK ENSBTAP00000020822/1-291 YRLMEQKLGK TSRPPVNTVL PARTLLLGWG PYALLYLYAT IADATSISPK ENSTTRP00000014288/1-253 YRLMEQKLGK TGRPPVNTVL PARTLLFGWG PYALLYLYAA VADVTSISPK bmy_17953T0/1-267 YRLMEQKLGK TGRPPVNTVL PARTLLLGWG PYALLYLYAA VADVTSISPK BACU005464/1-161 YRLMEQKLGK TGRPPV---- ---------- ---------- ---------- 251 300 ENSP00000352427/1-295 LQMVPALIAK MVPTINAINY ALGNEMVCRG IWQCLSPQKR EKDRTK ENSBTAP00000020822/1-291 LQMVPALIAK AVPTVNAMNY ALGSEMVHRG IWQCLSPQRR EHSREQ ENSTTRP00000014288/1-253 LQM------- ---------- ---------- ---------- ------ bmy_17953T0/1-267 LQMVPALIAK AVPTVNAINY ALGSEMVHRG IWQCLSPQKR ERDREQ BACU005464/1-161 ----PALIAK VVPTVNAINY ALGSEMVHRG IWQCLSPQKR ERDREQ