KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:43 2014 Check: 00 .. Name: bmy_17668T0/1-793 Len: 846 Check: 7192 Weight: 1.00 Name: ENSP00000302961/1-840 Len: 846 Check: 5473 Weight: 1.00 Name: ENSBTAP00000020825/1-840 Len: 846 Check: 3455 Weight: 1.00 Name: BACU018922/1-840 Len: 846 Check: 3347 Weight: 1.00 Name: ENSTTRP00000004347/1-840 Len: 846 Check: 1623 Weight: 1.00 // 1 50 bmy_17668T0/1-793 MSVVGIDLGF QSCYVAVARA GGIETIANEY SDRCTPS--D YGRMDLYLRD ENSP00000302961/1-840 MSVVGIDLGF QSCYVAVARA GGIETIANEY SDRCTPACIS FGPKNRSIGA ENSBTAP00000020825/1-840 MSVVGIDLGF QSCYVAVARA GGIETIANEY SDRCTPACIS FGPKNRSIGA BACU018922/1-840 MSVVGIDLGF QSCYVAVARA GGIETIANEY SDRCTPACIS FGPKNRSIGA ENSTTRP00000004347/1-840 MSVVGIDLGF QSCYVAVARA GGIETIANEY SDRCTPACIS FGPKNRSIGA 51 100 bmy_17668T0/1-793 ILQSQFQDVK LVISNAKNTV QGFKRFHGRA FSDPFVEAEK SKLAYDIVQL ENSP00000302961/1-840 AAKSQ----- -VISNAKNTV QGFKRFHGRA FSDPFVEAEK SNLAYDIVQL ENSBTAP00000020825/1-840 AAKSQ----- -VISNAKNTV QGFKRFHGRA FSDPFVEAEK SKLAYDIVQL BACU018922/1-840 AAKSQ----- -VISNAKNTV QGFKRFHGRA FSDPFVEAEK PKLAYDIVQL ENSTTRP00000004347/1-840 AAKSQ----- -VISNAKNTV QGFKRFHGRA FSDPFVEAEK SKLAYDIVQL 101 150 bmy_17668T0/1-793 PTGLTGIKVK YMEEERNFTT EQVTAMLLSK LKETAESVLK KPVVDCVVS- ENSP00000302961/1-840 PTGLTGIKVT YMEEERNFTT EQVTAMLLSK LKETAESVLK KPVVDCVVSV ENSBTAP00000020825/1-840 PTGLTGIKVK YMEEERSFTT EQVTAMLLSK LKETAESVLK KPVVDCVVSV BACU018922/1-840 PTGLTGIKVK YMEEERNFTT EQVTAMLLSK LKETAESVLK KPVVDCVVSV ENSTTRP00000004347/1-840 PTGLTGIKVK YMEEERNFTT EQVTAMLLSK LKETAESVLK KPVVDCVVSV 151 200 bmy_17668T0/1-793 ---------- -------IAG LNCLRLMNET TAVALAYGIY KQDLPALEEK ENSP00000302961/1-840 PCFYTDAERR SVMDATQIAG LNCLRLMNET TAVALAYGIY KQDLPALEEK ENSBTAP00000020825/1-840 PCFYTDAERR SVMDATQIAG LNCLRLMNET TAVALAYGIY KQDLPALEEK BACU018922/1-840 PCFYTDAERR SVMDATQIAG LNCLRLMNET TAVALAYGIY KQDLPALEEK ENSTTRP00000004347/1-840 PCFYTDAERR SVMDATQIAG LNCLRLMNET TAVALAYGIY KQDLPALEEK 201 250 bmy_17668T0/1-793 PRNVVFVDMG HSSYQVSVCA FNRGKLKVLA TAFDTTLGGR KFDEVLVNHF ENSP00000302961/1-840 PRNVVFVDMG HSAYQVSVCA FNRGKLKVLA TAFDTTLGGR KFDEVLVNHF ENSBTAP00000020825/1-840 PRNVVFVDMG HSSYQVSVCA FNRGKLKVLA TAFDTTLGGR KFDEVLVNHF BACU018922/1-840 PRNVVFVDMG HSSYQVSVCA FNRGKLKVLA TAFDTTLGGR KFDEVLVNHF ENSTTRP00000004347/1-840 PRNVVFVDMG HSSYQVSVCA FNRGKLKVLA TAFDTTLGGR KFDEVLVNHF 251 300 bmy_17668T0/1-793 CEEFGKKYKL DIKSKIRALL RLSQECEKLK KLMSANASDL PLSIECFMND ENSP00000302961/1-840 CEEFGKKYKL DIKSKIRALL RLSQECEKLK KLMSANASDL PLSIECFMND ENSBTAP00000020825/1-840 CEEFGKKYKL DIKSKIRALL RLSQECEKLK KLMSANASDL PLSIECFMND BACU018922/1-840 CEEFGKKYKL DIKSKIRALL RLSQECEKLK KLMSANASDL PLSIECFMND ENSTTRP00000004347/1-840 CEEFGKKYKL DIKSKIRALL RLSQECEKLK KLMSANASDL PLSIECFMND 301 350 bmy_17668T0/1-793 VD-------- ---------- ---------- -----LKKED IYAVEIVGGA ENSP00000302961/1-840 VDVSGTMNRG KFLEMCNDLL ARVEPPLRSV LEQTKLKKED IYAVEIVGGA ENSBTAP00000020825/1-840 VDVSGTMNRG KFLEMCDDLL ARVEPPLRSV LEQAKLKKED IYAVEIVGGA BACU018922/1-840 VDVSGTMNRG KFLEMCDDLL ARVEPPLRSV LEQAKLKKED IYAVEIVGGA ENSTTRP00000004347/1-840 VDVSGTMNRG KFLEMCDDLL ARVEPPLRSI LEQAKLKKED IYAVEIVGGA 351 400 bmy_17668T0/1-793 TRIPAVKEKI SKFFGKELST TLNADEAVTR GCALQCAILS PAFKVREFSI ENSP00000302961/1-840 TRIPAVKEKI SKFFGKELST TLNADEAVTR GCALQCAILS PAFKVREFSI ENSBTAP00000020825/1-840 TRIPAVKEKI SKFFGKEIST TLNADEAVTR GCALQCAILS PAFKVREFSI BACU018922/1-840 TRIPAVKEKI SKFFGKELST TLNADEAVTR GCALQCAILS PAFKVREFSI ENSTTRP00000004347/1-840 TRIPAVKEKI SKFFGKELST TLNADEAVTR GCALQCAILS PAFKVREFSI 401 450 bmy_17668T0/1-793 TDVVPYPISL RWNSPAEEGS SDCEVFSKNH AAPFSKVLTF YRKEPFTLEA ENSP00000302961/1-840 TDVVPYPISL RWNSPAEEGS SDCEVFSKNH AAPFSKVLTF YRKEPFTLEA ENSBTAP00000020825/1-840 TDVVPYSISL RWNSPAEEGS SDCEVFSKNH AAPFSKVLTF YRKEPFTLEA BACU018922/1-840 TDIVPYPISL RWNSPAEEGS SDCEVFSKNH AAPFSKVLTF YRKEPFTLEA ENSTTRP00000004347/1-840 TDVVPYPVSL RWNSPAEEGS SDCEVFSKNH AAPFSKVLTF YRKEPFTLEA 451 500 bmy_17668T0/1-793 YYSSPQDLPY PDPAIAQFSV QKVTPQSDGS SSKVKVKVRV NVHGIFSVSS ENSP00000302961/1-840 YYSSPQDLPY PDPAIAQFSV QKVTPQSDGS SSKVKVKVRV NVHGIFSVSS ENSBTAP00000020825/1-840 YYSSPQDLPY PDPAIAQFSV QKVTPQSDGS SSKVKVKVRV NVHGIFSVSS BACU018922/1-840 YYSSPQDLPY PDPAIAQFSV QKVTPQSDGS SSKVKVKVRV NVHGIFSVSS ENSTTRP00000004347/1-840 YYSAPQDLPY PDPAIAQFSV QKVTPQSDGS SSKVKVKVRV NVHGIFSVSS 501 550 bmy_17668T0/1-793 ASLVEVHKFE ENEEPMETDQ NAKEEEKMQV DQEEPHVEEQ QQQTPAENKA ENSP00000302961/1-840 ASLVEVHKSE ENEEPMETDQ NAKEEEKMQV DQEEPHVEEQ QQQTPAENKA ENSBTAP00000020825/1-840 ASLVEVHKFE ENEEPMETDQ NAKEEEKMQV DQEEPHVEEQ QQQTPAENRV BACU018922/1-840 ASLVEVHKFE ENEEPMETDQ NAKEEEKMQV DQEEPHVEEQ QQQTPAENKA ENSTTRP00000004347/1-840 ASLVEVHKFE ENEEPMETDQ NAKEEEKMQV DQEEPHVEEQ QQQTPAENKA 551 600 bmy_17668T0/1-793 ESEEMETSQA GSKDKKMDQP PQAKKAKVKT STVDLPIENQ LLWQIDREML ENSP00000302961/1-840 ESEEMETSQA GSKDKKMDQP PQAKKAKVKT STVDLPIENQ LLWQIDREML ENSBTAP00000020825/1-840 ESEEMETSQA GSKDKKMDQP PQAKKAKVKT STVDLPIENQ LLWQIDREML BACU018922/1-840 ESEEMETSQA GSKDKKMDQP PQAKKAKVKT STVDLPIENQ LLWQIDREML ENSTTRP00000004347/1-840 ESEEMETSQA GSKDKKMDQP PQAKKAKVKT STVDLPIENQ LLWQIDREML 601 650 bmy_17668T0/1-793 NLYIENEGKM IMQDKLEKER NDAKNAVEEY VYEMRDKLSG EYEKFVSEDD ENSP00000302961/1-840 NLYIENEGKM IMQDKLEKER NDAKNAVEEY VYEMRDKLSG EYEKFVSEDD ENSBTAP00000020825/1-840 NLYIENEGKM IMQDKLEKER NDAKNAVEEY VYEMRDKLSG EYEKFVSEDD BACU018922/1-840 NLYIENEGKM IMQDKLEKER NDAKNAVEEY VYEMRDKLSG EYEKFVSEDD ENSTTRP00000004347/1-840 NLYIENEGKM IMQDKLEKER NDAKNAVEEY VYEMRDKLSG EYEKFVSEDD 651 700 bmy_17668T0/1-793 RNSFTLKLED TENWLYEDGE DQPKQVYVDK LAELKNLGQP IKIRFQESEE ENSP00000302961/1-840 RNSFTLKLED TENWLYEDGE DQPKQVYVDK LAELKNLGQP IKIRFQESEE ENSBTAP00000020825/1-840 RNNFTLKLED TENWLYEDGE DQPKQVYVDK LAELKNLGQP IKMRFQESEE BACU018922/1-840 RNNFTLKLED TENWLYEDGE DQPKQVYVDK LAELKNLGQP IKIRFQESEE ENSTTRP00000004347/1-840 RNNFTLKLED TENWLYEDGE DQPKQVYVDK LAELKNLGQP IKIRFQESEE 701 750 bmy_17668T0/1-793 RPKLFDELGK QIQQYMKVIS SFKNKEDQYD HLDAVDLVRV QKSTNEAMEW ENSP00000302961/1-840 RPKLFEELGK QIQQYMKIIS SFKNKEDQYD HLDAADMTKV EKSTNEAMEW ENSBTAP00000020825/1-840 RPKLFDELGK QIQQYMKVIS SFKNKEDQYD HLDAADMLKV EKSMNEAMEW BACU018922/1-840 RPKLFDELGK QIQQFMKVIS SFKNKEDQYD HLDAVDLVRV EKSTNEAMEW ENSTTRP00000004347/1-840 RPKLFDELGK QIQQYMKVIS SFKNKEDQYD HLDAADMVKV EKSTNEAMEW 751 800 bmy_17668T0/1-793 MNNKLNLQNK QSLTVDPVVK AKEIEAKIKE LTSICSPIIS KPKPKVEPPK ENSP00000302961/1-840 MNNKLNLQNK QSLTMDPVVK SKEIEAKIKE LTSTCSPIIS KPKPKVEPPK ENSBTAP00000020825/1-840 MNNKLNLQNK QSLTMDPVVK AKEIEAKIKE LTSICSPIIS KPKPKVELPK BACU018922/1-840 MNNKLNLQNK QSLTVDPVVK AKEIEAKIKE LTSICSPIIS KPKPKVEPPK ENSTTRP00000004347/1-840 MNNKLNLQNK QSLTMDPVVK AKEIEAKIKE LMSICSPIIS KPKPKVEPPK 801 850 bmy_17668T0/1-793 EEQKNAEQNG PVDGQGDSPG PQAAEQGTDT ALPSDSDKKL PEMDID ENSP00000302961/1-840 EEQKNAEQNG PVDGQGDNPG PQAAEQGTDT AVPSDSDKKL PEMDID ENSBTAP00000020825/1-840 EEQKNAEQNG PVDGQGDNPG PQAAEQGTDT AVPSDSDKKL PEMDID BACU018922/1-840 EEQKNAEQNG PVDGQGDSPG PQAAEQGTDT ALPSDSDKKL PEMDID ENSTTRP00000004347/1-840 EEQKNAEQNG PVDGQGDSPG PQAAEQGTDT ALPSDSDKKL PEMDID