KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:46 2014 Check: 00 .. Name: ENSP00000296464/1-839 Len: 1133 Check: 8573 Weight: 1.00 Name: ENSBTAP00000020838/1-870 Len: 1133 Check: 2612 Weight: 1.00 Name: ENSTTRP00000012314/1-840 Len: 1133 Check: 8804 Weight: 1.00 Name: BACU004188/1-1022 Len: 1133 Check: 721 Weight: 1.00 Name: bmy_09261T0/1-762 Len: 1133 Check: 9450 Weight: 1.00 // 1 50 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020838/1-870 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---------- BACU004188/1-1022 MQSVPPKKKL EKKAEKQLFD AASFVKDLLA GGVAAAVSKT TVAPIERVKL bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020838/1-870 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---------- BACU004188/1-1022 LLQVQASSKQ ISPEAQYKGL VDCLLRIPRE QGFFSYWRGN LANVIRYFPT bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020838/1-870 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---------- BACU004188/1-1022 QALNFAFKDK YKQLFMSGVN KEKQFWRWFL ANLASGGAAG ATSLCVVYPL bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020838/1-870 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---------- BACU004188/1-1022 DFARTRLGVD IGKGPEERQF KGLGDCIMKI AKSDGIVGLY QGFCVSVQGI bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020838/1-870 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---------- BACU004188/1-1022 IVYRASYFGA YDTVKETPEE LNDKGQDHEA PNDKEQESQE EVNKKEEETH bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000296464/1-839 ---------- ---------- ---------- ---------- ---MSVVGID ENSBTAP00000020838/1-870 ---------- --RSRSSRSN SPEKDAVPAP RASAPSPLPL GGGMSVVGID ENSTTRP00000012314/1-840 ---------- ---------- ---------- ---------- ---MSVVGID BACU004188/1-1022 RERNEKEQDS QTSSRSSRSN SLGEDAVPAQ RASAPSPRPL GGGMSVVGID bmy_09261T0/1-762 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000296464/1-839 LGFLNCYIAV ARSGGIETIA NEYSDRCTPA CISLGSRTRA IGNAAKSQIV ENSBTAP00000020838/1-870 LGFLNCYIAV ARSGGIETIA NEYSDRCTPA CISLGSRTRA IGNAAKSQIV ENSTTRP00000012314/1-840 LGFLNCYIAV ARSGGIETIA NEYSDRCTPX XXXXXXXXXX XXXXXXXXII BACU004188/1-1022 LGFLNCYIAV ARSGGIETIA NEYSDRCTPA CISLGSRTRA IGNAAKSQIV bmy_09261T0/1-762 ---------- ---------- ---------A CISLGSRTRA IGNAAKSQIV 351 400 ENSP00000296464/1-839 TNVRNTIHGF KKLHGRSFDD PIVQTERIRL PYELQKMPNG SAGVKVRYLE ENSBTAP00000020838/1-870 TNVRNTIHGF KKLHGRSFDD PIVQTERIRL PYELQKMPNG SAGVKVRYLE ENSTTRP00000012314/1-840 TNVRNTIHGF KKLHGRSFDD PVVQTERIRL PYELQKMSNG SAGVKARYLE BACU004188/1-1022 TNVRNTIHGF KKLHGRSFDD PVVQTERIRL PYELQKMPNG SAGVKVRYLE bmy_09261T0/1-762 TNVRNTIHGF KKLHGRSFDD PVVQTERIRL PYELQKMPNG SAGVKVRYLE 401 450 ENSP00000296464/1-839 EERPFAIEQV TGMLLAKLKE TSENALKKPV ADCVISIPSF FTDAERRSVM ENSBTAP00000020838/1-870 EERPFAIEQV TGMLLAKLKE TSENALKKPV ADCVISIPSF FTDAERRSVM ENSTTRP00000012314/1-840 EERPFAIEQV TGMLLAKLKE TSENALKKPV ADCVISIPSF FTDAERRSVM BACU004188/1-1022 EERPFAIEQV TGMLLAKLKE TSENALKKPV ADCVISIPSF FTDAERRSVM bmy_09261T0/1-762 EERPFAIEQV TGMLLAKLKE TSENALKKPV ADCVISIPSF FTDAERRSVM 451 500 ENSP00000296464/1-839 AAAQVAGLNC LRLMNETTAV ALAYGIYKQD LPPLDEKPRN VVFIDMGHSA ENSBTAP00000020838/1-870 AAAQVAGLNC LRLMNETTAV ALAYGIYKQD LPPLDEKPRN VIFIDMGHSA ENSTTRP00000012314/1-840 AAAQVAGLNC LRLMNETTAV ALAYGIYKQD LPPLDEKPRN VIFIDMGHSA BACU004188/1-1022 AAAQVAGLNC LRLMNETTAV ALAYGIYKQD LPPLDEKPRN VIFIDMGHSA bmy_09261T0/1-762 AAAQVAGLNC LRLMNETTAV ALAYGIYKQD LPPLDEKPRN VIFIDMGHSA 501 550 ENSP00000296464/1-839 YQVLVCAFNK GKLKVLATTF DPYLGGRNFD EALVDYFCDE FKTKYKINVK ENSBTAP00000020838/1-870 YQVSVCAFNK GKLKVLATTF DPYLGGRNFD EVLVDYFCEE FKTKYKINVK ENSTTRP00000012314/1-840 YQISVCAFNK GKLKVLATTF DPYLGGRNFD EVLVDYFCDE FKTKYKINVK BACU004188/1-1022 YQISVCAFNK GKLKVLATTF DPYLGGRNFD EVLVDYFCDE FKTKYKINVK bmy_09261T0/1-762 YQISVCAFNK GKLKVLATTF DPYLGGRNFD EVLVDYFCDE FKTKYKINVK 551 600 ENSP00000296464/1-839 ENSRALLRLY QECEKLKKLM SANASDLPLN IECFMNDLDV SSKMNRAQFE ENSBTAP00000020838/1-870 ENSRALLRLY QECEKLKKLM SANASDLPLN IECFMNDLDV SSKMNRAQFE ENSTTRP00000012314/1-840 ENSRALLRLY QECEKLKKLM SANASDLPLN IECFINDLDV SSKMNRAQFE BACU004188/1-1022 ENSRALLRLH QECEKLKKLM SANASDLPLN IECFMNDLDV SSKMNRAQFE bmy_09261T0/1-762 ENSRALLRLH QECEKLKKLM SANASDLPLN IECFMNDLDV SSKMNRAQFE 601 650 ENSP00000296464/1-839 QLCASLLARV EPPLKAVMEQ ANLQREDISS IEIVGGATRI PAVKEQITKF ENSBTAP00000020838/1-870 QLCASLLARV EPPLKAVMEQ ANLQREDISS IEIVGGATRI PAVKEQITKF ENSTTRP00000012314/1-840 QLCASLLAXX XXXXXXXXXX XXLQCEDISS IEIVGGATRI PAVKEQITKF BACU004188/1-1022 QLCASLLARV DPPLKAVMEQ A--------- ---------- ---------- bmy_09261T0/1-762 QLCASLLARV DPPLKAVMEQ ANLQHEDISS IEIVGGATRI PAVKEQITKF 651 700 ENSP00000296464/1-839 FLKDISTTLN ADEAVARGCA LQCAILSPAF KVREFSITDL VPYSITLRWK ENSBTAP00000020838/1-870 FLKDISTTLN ADEAVARGCA LQCAILSPAF KVREFSITDI VPYSITLRWK ENSTTRP00000012314/1-840 FLKDISTTLN ADEAVARGCA LQCAILSPAF KVREFSITDL VPYSITLSWK BACU004188/1-1022 ---------- ---------- --------TF KVREFSITDL VPYSITLRWK bmy_09261T0/1-762 FLKDISTTLN ADEAVARGCA LQCAILSPAF KVREFSITDL VPYSITLRWK 701 750 ENSP00000296464/1-839 TSFEDGSGEC EVFCKNHPAP FSKVITFHKK EPFELEAFYT NLHEVPYPDA ENSBTAP00000020838/1-870 TSFEDGTGEC EVFCKNHPAP FSKVITFHKK EPFELEAFYT NLREVPYPDP ENSTTRP00000012314/1-840 TSFEDGTGEC EVFCKNHPAP FSKVITFHKK EPFELEAFYT NLHEVPYPDP BACU004188/1-1022 TSFEDGTGEC EVFCKNHPAP FSKVITFHKK EPFELEAFYT NLHEVPYPDP bmy_09261T0/1-762 TSFEDGTGEC EVFCKNHPAP FSKVITFHKK EPFELEAFYT NLHEVPYPDP 751 800 ENSP00000296464/1-839 RIGSFTIQNV FPQSDGDSSK VKVKVRVNIH GIFSVASASV IEKQNLEGDH ENSBTAP00000020838/1-870 RIGNFTIQNV FPQSDGDSSK VKVKVRINIH GIFSVASASV IEKQNIEGDQ ENSTTRP00000012314/1-840 RIGSFTIQNV FPQSDGDSSK VKVKVRINIH GIFSVASASV IEKQNIEGDH BACU004188/1-1022 RIGSFTIQNV FPQSDGDSSK VKVKVRINIH GIFSVASASV IEKQNIEGDH bmy_09261T0/1-762 RIGSFAIQNV FPQSDGDSSK VKVKVRINIH GIFSVASASV IEKQNIEGDH 801 850 ENSP00000296464/1-839 SDAPMETETS FKNENKDNMD KMQVDQEE-G HQKCHAEHTP EEEIDHTGAK ENSBTAP00000020838/1-870 SDVPMETETS FKNESKDDVD KMQVDQEEGG HQKCHAEHTP EEEIDHTGTK ENSTTRP00000012314/1-840 SDVPMETETS FKNESKDDVD KMQVDQEEEG HQKCHAEHTP EEEIDHTGTK BACU004188/1-1022 SDVPMETETS VKNESKDDVD KMQVDQEEEG HQKCHAEHTP EEEIDHTGTK bmy_09261T0/1-762 SDVPMETETS VKNESKDDVD KMQVDQEEEG HQKCHAEHTP EEEIDHTGTK 851 900 ENSP00000296464/1-839 TKSAVSDKQD RLNQTLKKGK VKSIDLPIQS SLCRQLGQDL LNSYIENEGK ENSBTAP00000020838/1-870 TKSGLSEKQE RLNQNIKKGK VKSIDLPIQS SLCRQLGQDL LNSYIENEGK ENSTTRP00000012314/1-840 TKSVPSDKQE RLNQTIKKGR IKSIDLPIQS SLCRQLGQDL LNIYIENEGK BACU004188/1-1022 TKSVPSDNQE RLNQTIKKGR VKSIDLPIQS SLCRQLGQDL LNIYIENEGK bmy_09261T0/1-762 TKSVPSDNQE RLNQTIKKGR VKSIDLPIQS SLCRQLGQDL LNIYIEN--- 901 950 ENSP00000296464/1-839 MIMQDKLEKE RNDAKNAVEE YVYDFRDRLG TVYEKFITPE DLSKLSAVLE ENSBTAP00000020838/1-870 MIMQDKLEKE RNDAKNAVEE YVYDFRDKLG TIYEKFITQE DLNKLSAILE ENSTTRP00000012314/1-840 MIMQDKLEKE RNDAKNAVEE YVYDFRDKLG TVYEKFITLE DLRKLSAILE BACU004188/1-1022 MIMQDKLEKE RNDAKNAVEE YVYDFRDKLG TVYEKFITQE DLRKLSAILE bmy_09261T0/1-762 ---------- ---------- ---------- ---------E DLRKLSAILE 951 1000 ENSP00000296464/1-839 DTENWLYEDG EDQPKQVYVD KLQELKKYGQ PIQMKYMEHE ERPKALNDLG ENSBTAP00000020838/1-870 DTENWLYEEG EDQPKQVYMD KLQELKKYGQ PIQVRYMEHE ERPKALNDLG ENSTTRP00000012314/1-840 DTENWLYEEG EDQAKQIYVD KLQELKKYGQ PIQMRYVEHE ERPKALNDLG BACU004188/1-1022 DTENWLYEEG EDQAKQIYVD KLQELKKYGQ PIQMRYVEHE ERPKALNDLG bmy_09261T0/1-762 DTENWLYEEG EDQAKQIYVD KLQELKKYGQ PIQMRYVEHE ERPKALNDLG 1001 1050 ENSP00000296464/1-839 KKIQLVMKVI EAYRNKDERY DHLDPTEMEK VEKCISDAMS WLNSKMNAQN ENSBTAP00000020838/1-870 KKIQLVMKVI EAYRNKDERY DHLDPAEIEK VEKHISEAMS WLNSKMNAQN ENSTTRP00000012314/1-840 KKIQLVMKVI EAYRNKDERY DHLDPAEMEK VEKYISEAMS WLNSKMNAQN BACU004188/1-1022 KKIQLVMKVI EAYRN----- ---------- ---------- ---------- bmy_09261T0/1-762 KKIQLVMKVI EAYRNKDERY DHLDPAEMEK VEKYISEAMS WLNSKMNAQN 1051 1100 ENSP00000296464/1-839 KLSLTQDPVV KVSEIVAKSK ELDNFCNPII YKPKPKAEVP EDKPKANSEH ENSBTAP00000020838/1-870 KLSLTQDPVV KVSEIVAKSK ELDNFCTP-I YKXXPKVEVA EDKAKDNSEH ENSTTRP00000012314/1-840 KLSLTQDPVV KVSEIVAKSK ELDHFCNPII YKPKPKVEVA EDKAKANSEH BACU004188/1-1022 ---------- ---------K ELDHFCNPII YKPKPKVEVA EDKAKANSEH bmy_09261T0/1-762 KLSLTQDPVV KVSEIVAKSK ELDHFCNPII YKPKPKVEVA EDKAKANSEH 1101 1150 ENSP00000296464/1-839 NGPMDGQSGT ETKSDSTKDS SQHTKSSGEM EVD ENSBTAP00000020838/1-870 NGPMDGQSGA ETKPDSTKDN SQHTKSSGEM EVD ENSTTRP00000012314/1-840 NGPVDGQSGT ETKPDTTKDS TQHTKSSGEM EVD BACU004188/1-1022 NGPVDGQSGT ETKPDTTKDS TQHTKSSGEM EVD bmy_09261T0/1-762 NGPVDGQSGT ETKPDTTKGS TQHTKSSGEM EVD