KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:47 2014 Check: 00 .. Name: ENSP00000359022/1-270 Len: 270 Check: 404 Weight: 1.00 Name: ENSBTAP00000020842/1-270 Len: 270 Check: 9196 Weight: 1.00 Name: bmy_15416T0/1-225 Len: 270 Check: 7631 Weight: 1.00 Name: BACU012371/1-225 Len: 270 Check: 8577 Weight: 1.00 Name: ENSTTRP00000007907/1-261 Len: 270 Check: 2590 Weight: 1.00 // 1 50 ENSP00000359022/1-270 MVTAMNVSHE VNQLFQPYNF ELSKDMRPFF EEYWATSFPI ALIYLVLIAV ENSBTAP00000020842/1-270 MVTTVNTSDE IEQMFQPYNF ELFRNMRPFL EEYWTTSFAI ALIYLLLIFV bmy_15416T0/1-225 MVTAMNVSDE VEQMFQPYNF ELFQDIRPVL EEYWATSFTI ALIYLLLIFV BACU012371/1-225 MVTAMNVSDE VEQMFQPYNF ELFQDVRPVL EEYWATSFTI ALIYLLLIFV ENSTTRP00000007907/1-261 MVTAMNVSDE VEQMFQPYNF ELFQDIRPVL EEYWATSFTI ALIYLLLIFV 51 100 ENSP00000359022/1-270 GQNYMKERKG FNLQGPLILW SFCLAIFSIL GAVRMWGIMG TVLLTGGLKQ ENSBTAP00000020842/1-270 GQNYMKARKG FNLQGPLIIW SFCLAVFSIF GTLRVWGYMG AVLLRGSPKQ bmy_15416T0/1-225 GQNYMKARKG FNLQGPLILW SFCLAIF--- ---------- ---------- BACU012371/1-225 GQNYMKARKG FNLQGPLILW SFCLAIF--- ---------- ---------- ENSTTRP00000007907/1-261 GQNYMRARKG FNLQGPLILW SFCLAIFSIL GAVRTWGYTG TVLL-GSLKK 101 150 ENSP00000359022/1-270 TVCFINFIDN STVKFWSWVF LLSKVIELGD TAFIILRKRP LIFIHWYHHS ENSBTAP00000020842/1-270 TVCFTSFVDS PIIQFWSFLF VLSKVVELGD TAFIILRKRP LIFVHWYHHS bmy_15416T0/1-225 ---------- ---------- --SKIIELGD MAFIILCKRP LIFVHWYHHS BACU012371/1-225 ---------- ---------- --SKIIELGD MAFIILCKRP LIFVHWYHHS ENSTTRP00000007907/1-261 TVCFFIFTDN PIIKF-SCHF VLSKIIELGD TAFIILYKWP LIFVHWYHHS 151 200 ENSP00000359022/1-270 TVLVYTSFGY KNKVPAGGWF VTMNFGVHAI MYTYYTLKAA NVKPPKMLPM ENSBTAP00000020842/1-270 TVLVYSSFGY KNKVAAGGWF MTMNFGVHAV MYTYYTLKAA KVKSPSWFPM bmy_15416T0/1-225 TVLVYTSFGY KNRVAAGGWF MTMNYGVHAI MYTYYTLKAA KVKPPRWFPM BACU012371/1-225 TVLVYTSFGY KNKVAAGGWF MTMNYGVHAI MYTYYTLKAA KVKPPRWFPM ENSTTRP00000007907/1-261 TELVYKSFGY KNKVAAGGWF MTMNYGVRAI MYTYYTLKAA KVKPPRWFPM 201 250 ENSP00000359022/1-270 LITSLQILQM FVGAIVSILT YIWRQDQGCH TTMEHLFWSF ILYMTYFILF ENSBTAP00000020842/1-270 LVTSLQILQM FIGATVCILA YIWRQEKGCH TTEEHFFWSF ILYATYFVLF bmy_15416T0/1-225 LITSLQILQM FMGATVGILT YIWRQEQGCH TTKEHLFWSF ILYTTYFLLF BACU012371/1-225 LITSLQILQM FMGATVGILT YIWRQEQGCH TTKEHLFWSF ILYTTYFLLF ENSTTRP00000007907/1-261 LVTSLQILQM FMGATVGILT YIWRQEQGCH TTKEHLFWSF ILYTTY---- 251 300 ENSP00000359022/1-270 AHFFCQTYIR PKVKAKTKSQ ENSBTAP00000020842/1-270 AKFFHQNYII PRIKAKTKSQ bmy_15416T0/1-225 VQFFHQNYVI TKVKAKTKGQ BACU012371/1-225 VQFFHQNYVI TKVKAKTKSQ ENSTTRP00000007907/1-261 ---FHQNYVI TKVKAKTKSQ