KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:47 2014 Check: 00 .. Name: ENSP00000389399/1-677 Len: 1045 Check: 4181 Weight: 1.00 Name: BACU017391/1-1045 Len: 1045 Check: 3419 Weight: 1.00 Name: ENSBTAP00000020850/1-677 Len: 1045 Check: 9340 Weight: 1.00 Name: bmy_20905T0/1-362 Len: 1045 Check: 3316 Weight: 1.00 Name: ENSTTRP00000004375/1-677 Len: 1045 Check: 634 Weight: 1.00 // 1 50 ENSP00000389399/1-677 MKVLGRSFFW VLFPVLPWAV QAVEHEEVAQ RVIKLHRGRG VAAMQSRQWV BACU017391/1-1045 MKVLGKSHLW VWLPFLHLLA SGAEHEEAVR PAIAWHRGQG AAVTQRRQWV ENSBTAP00000020850/1-677 MKVPGRSHFW MWLPFLQLLV SGAEQEGVAG PAVELPRGRG AAVPQRRPWV bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 MKVLGRSHLW VWLPFLHLLA SGAEHEEAVR HAIELHRRQG AAVTQRRQWV 51 100 ENSP00000389399/1-677 RDSCRKLSGL LRQKNAVLNK LKTAIGAVEK DVGLSDEEKL FQVHTFEIFQ BACU017391/1-1045 LDGCRKLSGL LRQKAVVLNK LKSAVRAVEK DASLSDEEKL FQVHMFEIFQ ENSBTAP00000020850/1-677 LDGCRRLSGL LRQKAAVLNK LEDAIRAVER DASLSDQEKL FRVHTLEIFQ bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 LDGCRKLSGL LRQKAVVLNK LKSAVRAVEK DASLSDEEKL FQVHMFEIFQ 101 150 ENSP00000389399/1-677 KELNESENSV FQAVYGLQRA LQGDYKDVVN MKESSRQRLE ALREAAIKEE BACU017391/1-1045 KELNESENSV FQAIHGLQRA LQGDYRDVVN VKESSRQRLE ALRKAAIKEE ENSBTAP00000020850/1-677 KELNESENSV FQAVHGLQRA LQGDYRDVAN MKESSRQRLE ALREAAIKEE bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 KELNESENSV FQAVHGLQRA LQGDYRDVAN VKESSRQRLE ALRKAAIKEE 151 200 ENSP00000389399/1-677 TEYMELLAAE KHQVEALKNM QHQNQSLSML DEILEDVRKA ADRLEEEIEE BACU017391/1-1045 AEYVELLAAE KHQVEALKNM QHRNKSLSLL DEILEDVRKA ADRLEKETEE ENSBTAP00000020850/1-677 TEYVELLAAE KHQVEALKHT QHRNKSLSLL DEILEDVRRA ADRLELEIEE bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 TEYVELLAAE KHQAEVLKSM QHRNKSLSLL DEILEDVRKA ADRLEKETEE 201 250 ENSP00000389399/1-677 HAFDDNKSVK GVNFEAVLRV EEEEANSKQN ITKREVEDDL GLSMLIDSQN BACU017391/1-1045 RAFDDNKSVR GVNFEAVLRV EEEEASSKQN LTKREVEEDL GLSMLIDSQN ENSBTAP00000020850/1-677 HAFDDNKSVR GVNFEAVLRV EEEEADPQQN LSRREVEEDL GLSMLIDSQN bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 RAFDDNRSVR GVNFEAVLRV EEDEAGSKQN LTNREVEEDL GLSMLIDSQN 251 300 ENSP00000389399/1-677 NQYILTKPRD STIPRADHHF IKDIVTIGML SLPCGWLCTA IGLPTMFGYI BACU017391/1-1045 NQYILTKPRD ATIPRADPHL IKDIVTIGML SLPCGWLCTM IGLPTMFGYI ENSBTAP00000020850/1-677 NQYILTRPRD ATIPRADHHL IKDLVSIVML SLPCGWLCTT IGLPTMFGYI bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 NQYILTKPRD ATIPRADPHL IKDIVTIGML SLPCGWLCTT IGLPTMFGYI 301 350 ENSP00000389399/1-677 ICGVLLGPSG LNSIKSIVQV ETLGEFGVFF TLFLVGLEFS PEKLRKVWKI BACU017391/1-1045 ICGVLLGPSG LNSIKSVVQV ETLGEFGVFF TLFLVGLEFS PEKLRKVWKI ENSBTAP00000020850/1-677 ICGVLLGPSG LNSIKSIVQV ETLGEFGVFF TLFLVGLEFS PEKLRKVWKI bmy_20905T0/1-362 ---------- -----SVVQV ETLGEFGVFF TLFLVGLEFS PEKLRKVWKI ENSTTRP00000004375/1-677 ICGVLLGPSG LNSIKSVVQV ETLGEFGVFF TLFLVGLEFS PEKLRKVWKI 351 400 ENSP00000389399/1-677 SLQGPCYMTL LMIAFGLLWG HLLRIKPTQS VFISTCLSLS STPLVSRFLM BACU017391/1-1045 SLQGPCYMTL LMVAFGLVWG HLLQIRPTQS VFISTCLSLS STPLVSKFLV ENSBTAP00000020850/1-677 SLQGPCYMTL LMVAFGLVWG HLLQIRPTQS VFISACLSLS STPLVSKFLV bmy_20905T0/1-362 SLQGPCYMTL LMVAFGLVWG HLLQIRPTQS VFISTCLSLS STPLVSKFLV ENSTTRP00000004375/1-677 SLQGPCYMTL LMVAFGLLWG HLLQIRPTQS VFISTCLSLS STPLVSKFLV 401 450 ENSP00000389399/1-677 GSARGDKEGD IDYSTVLLGM LVTQDVQLGL FMAVMPTLIQ AGASASSSIV BACU017391/1-1045 GSTRSDREGD IDYGAVLLGM LVTQDVQLGL FIAVLPTLIQ AGAGAHASVA ENSBTAP00000020850/1-677 GSARSDKEGD IDYGALLLGM LVTQDVQLGL FIAILPTLIQ AGAGAHASVA bmy_20905T0/1-362 GSTRSDKEGD IDYGAVLLGM LVTQDVQLGL FIAVLPTLIQ AGAGAHASVA ENSTTRP00000004375/1-677 GSARSDKEGD IDYGAVLLGM LVTQDVQLGL FMAVLPTLIQ AGAGAHASVA 451 500 ENSP00000389399/1-677 VEVLRILVLI GQILFSLAAV FLLCLVIKKY LIGPYYRKLH MESKGNKEIL BACU017391/1-1045 MEILRVLGLV GQVLFSLAAV LLFCLVVRTY LVGPYCRKLH AESKGNKEIL ENSBTAP00000020850/1-677 MEALRLLALV GQVLFSLAAV LLVCLLVRTY LVGPYCRKLH VESKGNKEIL bmy_20905T0/1-362 MEILRVLGLV GQVLFSLAAV LLFCLVVRTY LVGPYCRKLH AESKGNKEIL ENSTTRP00000004375/1-677 MEILRVLGLV GQVLFSLAAV LLFCLVVRTY LVGPYCRRLH AESKGNKEVL 501 550 ENSP00000389399/1-677 ILGISAFIFL MLTVTELLDV SMELGCFLAG ALVSSQGPVV TEEIATSIEP BACU017391/1-1045 ILGISAFIFL MLTVTELLDV SMELGCFLAG ALVSSQGHVV AEEVVSYVEP ENSBTAP00000020850/1-677 VLGVSAFTFL MLTVTELLGV SMELGCFLAG ALVSSQGHAA AEEVVSCVEP bmy_20905T0/1-362 ILGISAFIFL MLTVTELLDV SMELGCFLAG ALVSSQGHVV AEEVVSYVEP ENSTTRP00000004375/1-677 ILGISAFTFL MLTVTELLDV SMELGCFLAG ALVSSQGHVV AEEVVSCVEP 551 600 ENSP00000389399/1-677 IRDFLAIVFF ASIGLHVFPT FVAYELTVLV FLTLSVVVMK FLLAALVLSL BACU017391/1-1045 VRDFLAIVFF ASIGLHVFPT FVLYELTVLL VLTLSVVVMK FVLAALVLSL ENSBTAP00000020850/1-677 VRDFLAIVFF ASIGLHVFPT FVLYELTVLL VLTLSVVVMK FVLAALVLSL bmy_20905T0/1-362 VRDFLAIVFF ASIGLHVFPT FVLYELTVLL VLTLSVVVMK FVLAALVLSL ENSTTRP00000004375/1-677 VRDFLAIVFF ASIGLHVFPT FVLRELAVLL ALTLSVVAMK FALAALVLSL 601 650 ENSP00000389399/1-677 ILPRSSQYIK WIVSAGLAQV SEFSFVLGSR ARRAGVISRE VYLL------ BACU017391/1-1045 LLPKTSQYVK WIVAAGLAQV SEFSLVLGSR ARRARVISRE AGLIEANGEL ENSBTAP00000020850/1-677 LLPKTSQYVK WIVAAGLAQV SEFALVLGSR ARRARVISRE VYLL------ bmy_20905T0/1-362 LLPKTSQYVK WIVAAGLAQV SEFSLVLGSR ARRARVISRE VYLL------ ENSTTRP00000004375/1-677 LLPKTSQYVK WIVAAGLAQV SEFSLVLGSR ARRARIISRE VYLL------ 651 700 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ---------- BACU017391/1-1045 KVFIDQNLSP GKGVVSLVAV HPSTVNTLGK QLLPKTFGQS NVNIAQQVVI ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ---------- BACU017391/1-1045 GTPQRPAAPN TIVVGSPHTP NTHFVSQNQP SDPSPWSAGK RNRKGEKNGK ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ---------- BACU017391/1-1045 GLRHFSMKVC EKVQRKGTTS YNEVADELVA EFSAADNHIL PNESAYDQKN ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000389399/1-677 ---------- -ILSVTTLS- ---------- ---------- ---------- BACU017391/1-1045 IRRRVYDALN VLMAMNIISK EKKEIRWIGL PTNSAQECQN LEVERQRRLE ENSBTAP00000020850/1-677 ---------- -ILSVTTLS- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- -ILSVTTLS- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- -ILSVTTLS- ---------- ---------- ---------- 851 900 ENSP00000389399/1-677 ---------- -LLLAPVLWR AAITRC---- --VPRPERRS SL-------- BACU017391/1-1045 RIKQKQSQLQ ELILQQIAFK NLVERNRRAE QQASRPPPAN SAIRLPFIIV ENSBTAP00000020850/1-677 ---------- -LLLAPLLWR AAVARC---- --APRPERRS SL-------- bmy_20905T0/1-362 ---------- -LLLAPLLWR AAVARC---- --APRPERRS SF-------- ENSTTRP00000004375/1-677 ---------- -LLLAPLLWR AAVARC---- --APRPERRS SL-------- 901 950 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ---------- BACU017391/1-1045 NTSKKTVIDC SISNDKFEYL FNFDNTFEIH DDIEVLKRMG MACGLESGSC ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ---------- BACU017391/1-1045 SADDLKVARS LVPKALEPYV TEMAQGSLGG VFVTSAVSTA NGTRLSASDL ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ---------- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000389399/1-677 ---------- ---------- ---------- ---------- ----- BACU017391/1-1045 ANGADGALAT SSSGSQYSGS RVETPVSYVG EEDEDEDFHE DEEED ENSBTAP00000020850/1-677 ---------- ---------- ---------- ---------- ----- bmy_20905T0/1-362 ---------- ---------- ---------- ---------- ----- ENSTTRP00000004375/1-677 ---------- ---------- ---------- ---------- -----