KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:49 2014 Check: 00 .. Name: ENSTTRP00000002117/1-921 Len: 980 Check: 1012 Weight: 1.00 Name: ENSP00000427793/1-922 Len: 980 Check: 9677 Weight: 1.00 Name: ENSBTAP00000020867/1-921 Len: 980 Check: 6803 Weight: 1.00 Name: bmy_15813T0/1-956 Len: 980 Check: 9194 Weight: 1.00 Name: BACU006254/1-871 Len: 980 Check: 9773 Weight: 1.00 // 1 50 ENSTTRP00000002117/1-921 ---------- ---------- ---------- ---------- ---------- ENSP00000427793/1-922 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020867/1-921 ---------- ---------- ---------- ---------- ---------- bmy_15813T0/1-956 MNKMESLPLE VGVGLETEII LEWSPKAEKV AKGLSDGAVK TKVPQQHKVF BACU006254/1-871 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002117/1-921 --MATASPRS DTSNNDSGRL Q------LQV TVSSAKLKRK KNWFGTAIYT ENSP00000427793/1-922 --MATASPRS DTSNNHSGRL Q------LQV TVSSAKLKRK KNWFGTAIYT ENSBTAP00000020867/1-921 --MATASPRS DTSNNHSGRL Q------LQV TVSSAKLKRK KNWFGTAIYT bmy_15813T0/1-956 RLGMAGMPVR EKRGEERGHF QPSPLSGVFP KFSSAKLKRK KNWFGTAIYT BACU006254/1-871 ---------- ---------- -------MFL LVSSAKLKRK KNWFGTAIYT 101 150 ENSTTRP00000002117/1-921 EVVVDGESKK TAKSSSSSNP KWDEQLTVNV TPQTTLEFRV WSHHTLKADA ENSP00000427793/1-922 EVVVDGEITK TAKSSSSSNP KWDEQLTVNV TPQTTLEFQV WSHRTLKADA ENSBTAP00000020867/1-921 EVAADGESKK TAKSSSSSNP KWDEQLTVNV TPQTTLEFRV WSHHTIKADA bmy_15813T0/1-956 EVVVDGESKK TAKSSSSSNP KWDEQLTVNV TPQTTLEFRV WSHHTLKADA BACU006254/1-871 EVVVDGESKK TAKSSSSSNP KWDEQLTVNV TPQTTLEFRV WSHHTLKADA 151 200 ENSTTRP00000002117/1-921 LLGRATIDLK QALLIHNRKL ERVKEQLKLS LETKNGVVQT GELTVVLDGL ENSP00000427793/1-922 LLGKATIDLK QALLIHNRKL ERVKEQLKLS LENKNGIAQT GELTVVLDGL ENSBTAP00000020867/1-921 LLGRATVDLK QALLIHNRKL ERVKEQLKLC LETKNGVVQT GELTVVLDGL bmy_15813T0/1-956 LLGRATIDLK QALLIHNRKL ERVKEQLKLS LETKNGVVQT GELTVVLDGL BACU006254/1-871 LLGRATVDLK QALLIHNRKL EREKEQLKLS LETQNGVVQT GELTVVLDGL 201 250 ENSTTRP00000002117/1-921 VIEQENRTNC SSSPTMEIQQ NGDALHENGD PSARTTTRLA AEGTNGIDNH ENSP00000427793/1-922 VIEQENITNC SSSPTIEIQE NGDALHENGE PSARTTARLA VEGTNGIDNH ENSBTAP00000020867/1-921 VIEQENITNG SSSPAIEVQQ NGDALHEDRE PSARTTTRLA AEDTNGIDNC bmy_15813T0/1-956 VIEQENRTNC SSSPTREIQQ NGDALHENGD PSARTTTRLA AEGTNGIDNH BACU006254/1-871 VIEQENRTNC SSSPTREIQQ NGDALHENGD PSARTTTRLA AEGTNGIDNH 251 300 ENSTTRP00000002117/1-921 VPTNTVVQNS CCSYVINGDN TPSSPSQVAA RPQNTPAPKP LTSEPANDTV ENSP00000427793/1-922 VPTSTLVQNS CCSYVVNGDN TPSSPSQVAA RPKNTPAPKP LASEPADDTV ENSBTAP00000020867/1-921 VPTNTVVQNS CCSYVVNGDN TP-SPSQVAA RPKHTPAPKP LPSEPANDTV bmy_15813T0/1-956 VPTNTVVQNS CCSYVVNGDN TPSSPSQVAA RPKNTPAPKP LTSEPANDTV BACU006254/1-871 VPTNTVVQNS CCSYVVNGDN TPSSPSQVAA RPKNTPAPKP LTSEPANDTV 301 350 ENSTTRP00000002117/1-921 NGESSSSAPT DNASTTGTAI VSGETALSSN CTSTTVEDPP VQEILTSSEN ENSP00000427793/1-922 NGESSSFAPT DNASVTGTPV VSEENALSPN CTSTTVEDPP VQEILTSSEN ENSBTAP00000020867/1-921 NGDSPSSVPT DNASSTGTAI GSGEPALSSN CTSTPVEDPP VQETLTSSEN bmy_15813T0/1-956 NGESSSSAPT DNASTTGTAV VSGETALSSN CTSTTVEDPP VQEIPTSSEN BACU006254/1-871 NGESSSSAPT DNASTTGTAT VSGETALSSN CTSTTVEDPP VQEIPTSSEN 351 400 ENSTTRP00000002117/1-921 NECILSNSAA FGSEARSTLD PSTSSSGSSS AFEAAKLRQP DVCVEPVRQQ ENSP00000427793/1-922 NECIPSTSAE LESEARSILE PDTSNSRSSS AFEAAKSRQP DGCMDPVRQQ ENSBTAP00000020867/1-921 NECIVSNSAA FGSEAQSTLD PSTSSSASSS AFEAAKLRQP DGCVEPVRQQ bmy_15813T0/1-956 NECILSNSAA FGSEARSTLD PSTSSSGSSS AFEAAKLRQP DVCAEPVQQQ BACU006254/1-871 NECILSNSAA FGSEARSTLD PSTSSSGSSS AFEAAKLRQP DVCAEPVRQQ 401 450 ENSTTRP00000002117/1-921 SGNANTETLP SGWEQRKAPH GXXXXXXXXX XXXXXXXXXX XXXXWERRVD ENSP00000427793/1-922 SGNANTETLP SGWEQRKDPH GRTYYVDHNT RTTTWERPQP LPPGWERRVD ENSBTAP00000020867/1-921 SGGANTETLP SGWEQRKDPH GRTYYVDHNT RTTTWERPQP LPPGWERRVD bmy_15813T0/1-956 SGNANTETLP SGWEQRKDPH GRTYYVDHNT RTTTWERPQP LPPGWERRVD BACU006254/1-871 SGNANTETLP S--------- ---------- ---------- ---GWERRVD 451 500 ENSTTRP00000002117/1-921 DRGRVYYVDH NTRTTTWQRP TMESVRNFEQ WQSQRNQLQG AMQQFNQRYL ENSP00000427793/1-922 DRRRVYYVDH NTRTTTWQRP TMESVRNFEQ WQSQRNQLQG AMQQFNQRYL ENSBTAP00000020867/1-921 DRGRVYYVDH NTRTTTWQRP TMESVRNFEQ WQSQRSQLQG AMQQFNQRYL bmy_15813T0/1-956 DRGRVYYVDH NTRTTTWQRP TMESVRNFEQ WQSQRNQLQG AMQQFNQRYL BACU006254/1-871 DRGRVYYVDH NTRTTTWQRP TMESVRNFEQ WQSQRNQLQG AMQQFNQRYL 501 550 ENSTTRP00000002117/1-921 YSASMLAAEN DPYGPLPPGW EKRVDSTDRV YFVNHNTKTT QWEDPRTQGX ENSP00000427793/1-922 YSASMLAAEN DPYGPLPPGW EKRVDSTDRV YFVNHNTKTT QWEDPRTQGL ENSBTAP00000020867/1-921 YSASMLAAEN DPYGPLPPGW EKRVDSTDRV YFVNHNTKTT QWEDPRTQGL bmy_15813T0/1-956 YSASMLAAEN DPYGPLPPGW EKRVDSTDRV YFVNHNTKTT QWEDPRTQGL BACU006254/1-871 YSASMLAAEN DPYGPLPPGW EKRVDSTDRV YFVNHNTKTT QWEDPRTQGL 551 600 ENSTTRP00000002117/1-921 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXTKGGPQIA ENSP00000427793/1-922 QNEEPLPEGW EIRYTREGVR YFVDHNTRTT TFKDPRNGKS SVTKGGPQIA ENSBTAP00000020867/1-921 QNEEPLPEGW EIRYTREGVR YFVDHNTRTT TFKDPRNGKS SVTKGGPQIA bmy_15813T0/1-956 QNEEPLPEGW EIRYTREGVR YFVDHNTRTT TFKDPRNGKS SVTKGGPQIA BACU006254/1-871 QNEEPLPEGW EIRYTREGVR YFVDHNTRTT TFKDPRNGKS SVTKGGPQIA 601 650 ENSTTRP00000002117/1-921 YERSFRWKLA HFRYLCQSNA LPSHVKINVS RQTLFEDSFQ QXXXXXXXXX ENSP00000427793/1-922 YERGFRWKLA HFRYLCQSNA LPSHVKINVS RQTLFEDSFQ QIMALKPYDL ENSBTAP00000020867/1-921 YERSFRWKLA HFRYLCQSNA LPSHVKINVS RQTLFEDSFQ QIMALKPYDL bmy_15813T0/1-956 YERSFRWKLA HFRYLC---- ---------- ---------- QIMALKPYDL BACU006254/1-871 YERSFRWKLA HFRYLCQSNA LPSHVKINVS RQTLFEDSFQ QIMALKPYDL 651 700 ENSTTRP00000002117/1-921 XXXXXXXXXX XXXXXXXXXX XEWFFLLSHE VLNPMYCLFE YAGKNNYCLQ ENSP00000427793/1-922 RRRLYVIFRG EEGLDYGGLA REWFFLLSHE VLNPMYCLFE YAGKNNYCLQ ENSBTAP00000020867/1-921 RRRLYVIFRG EEGLDYGGLA REWFFLLSHE VLNPMYCLFE YAGKNNYCLQ bmy_15813T0/1-956 RRRLYVIFRG EEGLDYGGLA REWFFLLSHE VLNPMYCLFE YAGKNNYCLQ BACU006254/1-871 RRRLYVIFRG EEGLDYGGLA REWFFLLSHE VLNPMYCLFE YAGKNNYCLQ 701 750 ENSTTRP00000002117/1-921 INPASTINPD HLLYFCFIGR FIAMALFHGK FIDTGFSLPF YKRMLSKKLT ENSP00000427793/1-922 INPASTINPD HLSYFCFIGR FIAMALFHGK FIDTGFSLPF YKRMLSKKLT ENSBTAP00000020867/1-921 INPASTINPD HLSYFCFIGR FIAMALFHGK FIDTGFSLPF YKRMLSKKLT bmy_15813T0/1-956 INPASTINPD HLSYFCFIGR FIAMALFHGK FIDTGFSLPF YKRMLSKKLT BACU006254/1-871 INPASTINPD HLSYFCFIGR FIAMALFHGK FIDTGFSLPF YKRMLSKKLT 751 800 ENSTTRP00000002117/1-921 IKDLESIDTE FYNSLIWIRD NNIEECGLEM YFSVDMEILG KVTSHDLKLG ENSP00000427793/1-922 IKDLESIDTE FYNSLIWIRD NNIEECGLEM YFSVDMEILG KVTSHDLKLG ENSBTAP00000020867/1-921 IKDLESIDTE FYNSLIWIRD NNIEECGLEM YFSVDMEILG KVTSHDLKLG bmy_15813T0/1-956 IKDLESIDTE FYNSLIWIRD NNIEECGLEM YFSVDMEILG KVTSHDLKLG BACU006254/1-871 IKDLESIDTE FYNSLIWIRD NNIEECGLEM YFSVDMEILG KVTSHDLKLG 801 850 ENSTTRP00000002117/1-921 GSNILVTEEN KDEYIGLMTE WRFSRGVQEQ TKAFLDGFNE VVPLQWLQYF ENSP00000427793/1-922 GSNILVTEEN KDEYIGLMTE WRFSRGVQEQ TKAFLDGFNE VVPLQWLQYF ENSBTAP00000020867/1-921 GSNILVTEEN KDEYIGLMTE WRFSRGVQEQ TKAFLDGFNE VVPLQWLQYF bmy_15813T0/1-956 GSNILVTEEN KDEYIGLMTE WRFSRGVQEQ TKAFLDGFNE VVPLQWLQYF BACU006254/1-871 GSNILVTEEN KDEYIGLMTE WRFSRGVQEQ TKAFLDGFNE VVPLQWLQYF 851 900 ENSTTRP00000002117/1-921 DEKELEVMLC GMQEVDLADW QRNTVYRHYT RNSKQIIWFW QFVKETDNEV ENSP00000427793/1-922 DEKELEVMLC GMQEVDLADW QRNTVYRHYT RNSKQIIWFW QFVKETDNEV ENSBTAP00000020867/1-921 DEKELEVMLC GMQEVDLADW QRNTVYRHYT RNSKQIIWFW QFVKETDNEV bmy_15813T0/1-956 DEKELEVMLC GMQEVDLADW QRNTVYRHYT RNSKQIIWFW QFVKETDNEV BACU006254/1-871 DEKELEVMLC GMQEVDLADW QRNTVYRHYT RNSKQIIWFW QFVKETDNEV 901 950 ENSTTRP00000002117/1-921 RMRLLQFVTG TCRLPLGGFA ELMGSNGPQK FCIEKVGKDT WLPRSHTS-N ENSP00000427793/1-922 RMRLLQFVTG TCRLPLGGFA ELMGSNGPQK FCIEKVGKDT WLPRSHTCFN ENSBTAP00000020867/1-921 RMRLLQFVTG TCRLPLGGFA ELMGSNGPQK FCIEKVGKDT WLPRSHTCFN bmy_15813T0/1-956 RMRLLQFVTG TCRLPLGGFA ELMGSNGPQK FCIEKVGKDT WLPRSHTCFN BACU006254/1-871 RMRLLQFVTG TCRLPLGGFA ELMGSNGPQK FCIEKVGKDT WLPRSHTCFN 951 1000 ENSTTRP00000002117/1-921 RLDLPPYKSY EQLKEKLLFA IEETEGFGQE ENSP00000427793/1-922 RLDLPPYKSY EQLKEKLLFA IEETEGFGQE ENSBTAP00000020867/1-921 RLDLPPYKSY EQLKEKLLFA IEETEGFGQE bmy_15813T0/1-956 RLDLPPYKSY EQLKEKLLFA IEETEGFGQE BACU006254/1-871 RLDLPPYKSY EQLKEKLLFA IEETEGFGQE