KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:50 2014 Check: 00 .. Name: bmy_15793T0/1-228 Len: 377 Check: 1497 Weight: 1.00 Name: ENSP00000362296/1-361 Len: 377 Check: 3897 Weight: 1.00 Name: ENSBTAP00000020869/1-363 Len: 377 Check: 6934 Weight: 1.00 Name: BACU013163/1-363 Len: 377 Check: 8811 Weight: 1.00 // 1 50 bmy_15793T0/1-228 ---------- ---------- ---------- ---------- ---------- ENSP00000362296/1-361 MATAASNPYS ILSSTSLVHA DSAGMQQGSP FRNPQKLLQS DYLQGVPSNG ENSBTAP00000020869/1-363 MATAASNPYN ILTSSSLVHA DSAGMQQGSP FRNPQKLLQS DYLQGVPSNG BACU013163/1-363 MATAASNPYS ILSSSSMVHA DSAGMQQGSP FRNPQKLLQS DYLQGVPSNG 51 100 bmy_15793T0/1-228 ---------- ---------- ---------- ---------- ---------- ENSP00000362296/1-361 HPLGHHWVTS LSDGGPWSST LATSPLDQQD VKPGREDLQL GAIIHHRSPH ENSBTAP00000020869/1-363 HPLGHHWVTS LSDGGPWSST LATSPLEQQD VKPAREDLQL GAIIHHRSPH BACU013163/1-363 HPLGHHWVTS LSDGGPWSST LATSPLEQQD VKPGREDLQL GAIIHHRSPH 101 150 bmy_15793T0/1-228 ---------- ---------- ---------- ---------- ---MLEHGGL ENSP00000362296/1-361 VAHHSPHTNH PNAWGASPAP NPSITSSGQP LNVYSQPGFT VSGMLEHGGL ENSBTAP00000020869/1-363 VAHHSPHTNH PNAWGASPAP NPSITSSSQP LNVYSQSGFT VSGMLEHGGL BACU013163/1-363 VAHHSPHTNH PNAWGASPAP NPSITSSSQP LNVYSQPGFT VSGMLEHGGL 151 200 bmy_15793T0/1-228 TPPPASASTQ SLHPVLREPP DHGDLGSHHC QDHSDEETPT SDELEQFAKQ ENSP00000362296/1-361 TPPPAAASAQ SLHPVLREPP DHGELGSHHC QDHSDEETPT SDELEQFAKQ ENSBTAP00000020869/1-363 TPPPASASAQ SLHPVLREAP DHGDLGSHHC LDHSDEETPT SDELEQFAKQ BACU013163/1-363 TPPPASASTQ SLHPVLREPP DHGDLGSHHC QDHSDEETPT SDELEQFAKQ 201 250 bmy_15793T0/1-228 FKQRRIKLGF TQADVGLALG TLYGNVFSQT TICRFEALQL SFKNMCKLKP ENSP00000362296/1-361 FKQRRIKLGF TQADVGLALG TLYGNVFSQT TICRFEGLQL SFKNMCKLKP ENSBTAP00000020869/1-363 FKQRRIKLGF TQADVGLALG TLYGNVFSQT TICRFEALQL SFKNMCKLKP BACU013163/1-363 FKQRRIKLGF TQADVGLALG TLYGNVFSQT TICRFEALQL SFKNMCKLKP 251 300 bmy_15793T0/1-228 LLNKWLEEAD SSTGSPTSID KIAAQGRKRK KRTSIEVSVK GVLETHFLKC ENSP00000362296/1-361 LLNKWLEEAD SSTGSPTSID KIAAQGRKRK KRTSIEVSVK GVLETHFLKC ENSBTAP00000020869/1-363 LLNKWLEEAD SSTGSPTSID KIAAQGRKRK KRTSIEVSVK GVLETHFLKC BACU013163/1-363 LLNKWLEEAD SSTGSPTSID KIAAQGRKRK KRTSIEVSVK GVLETHFLKC 301 350 bmy_15793T0/1-228 PKPAAQEISS LADSLQLEKE VAKDFAFTPD CFSWRRR--- ---PDPETLA ENSP00000362296/1-361 PKPAAQEISS LADSLQLEKE VVRVW----- -FCNRRQKEK RMTPPGDQQP ENSBTAP00000020869/1-363 PKPAAQEISS LADSLQLEKE VVRVW----- -FCNRRQKEK RMTPPGDQQP BACU013163/1-363 PKPAAQEISS LADSLQLEKE VVRVW----- -FCNRRQKEK RMTPPGDQQP 351 400 bmy_15793T0/1-228 TDWVNAFQFV SPPVHCLFLK RYDSNLS ENSP00000362296/1-361 HEVYS--HTV KTDTSCHDL- ------- ENSBTAP00000020869/1-363 HEVYSHTHTV KTDTSCHDL- ------- BACU013163/1-363 HEVYSHTHTV KTDTSCHDL- -------