KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:51 2014 Check: 00 .. Name: BACU000059/1-598 Len: 658 Check: 1920 Weight: 1.00 Name: ENSP00000318986/1-340 Len: 658 Check: 6371 Weight: 1.00 Name: ENSBTAP00000020876/1-338 Len: 658 Check: 457 Weight: 1.00 Name: bmy_09636T0/1-267 Len: 658 Check: 7319 Weight: 1.00 Name: ENSTTRP00000006779/1-339 Len: 658 Check: 7391 Weight: 1.00 // 1 50 BACU000059/1-598 MEFGINRNGK NLGLANKQDK EGALGEADVI ECLSLEKLVN EHKCLCQIEP ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------- bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000059/1-598 CSAVLGYGKK IDKSIKKGLY WLLHIIARDF DALNERIQKD TTEQRALEEQ ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------- bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 101 150 BACU000059/1-598 ENRERAERVR KLREEREQRE REQAELDGTS GLAELDPEPI IVNPFQPIAS ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------- bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 151 200 BACU000059/1-598 VIIENEKKLE REKKRQNVEE NSDGCPLKHK MEHEQIETQS QISDSSQKNN ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------- bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 201 250 BACU000059/1-598 EFGIVENYKE ALTQQLENED ETDQQSSESD NSKKKTKKLR MKRSHRVEPV ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------- bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 251 300 BACU000059/1-598 NTDDSAPKSP TPPPPPPPVG WGTPKVTRLP KLEPLGETRH NGQQDELEDL ENSP00000318986/1-340 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020876/1-338 ---------- ---------- ---------- ---------- ---------M bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000006779/1-339 ---------- ---------- ---------- ---------- ---------- 301 350 BACU000059/1-598 LLSQRRKTLN IDDWDKTTVA VSLKAKSERK VAKQICKVVL DHFEKEYSRE ENSP00000318986/1-340 MLTQ------ ---------- --LKAKSEGK LAKQICKVVL DHFEKQYSKE ENSBTAP00000020876/1-338 VLTL------ ---------- --LKAKPERK LAKQICKVVL DHFEKQYSKE bmy_09636T0/1-267 MLTRFSKLVT SECVSILFLS SXLKAKSERK VAKQICKVVL DHFEKEYSRE ENSTTRP00000006779/1-339 MLTR------ ---------- --LKAKSERK VAKQICKVVL DHFEKEYSRE 351 400 BACU000059/1-598 LGDAWHTVRD ILTSPSCWQY AVLLNRFNYP FELEKDLHLK GYHSLFQGSL ENSP00000318986/1-340 LGDAWNTVRE ILTSPSCWQY AVLLNRFNYP FELEKDLHLK GYHTLSQGSL ENSBTAP00000020876/1-338 LGDAWNTVRD ILTSPSCWQY AVLLNRFNYP FELEKDLHLK GYHSLLQGSL bmy_09636T0/1-267 LGDAWHTVRD ILTXPSCWQY AVLLNRFNYP FELEKDLHLK GYHSLFQGSL ENSTTRP00000006779/1-339 LGDAWHTVRD ILTSPSCWQY AVLLNRFNYP FELEKDLHLK GYHSLFQGSL 401 450 BACU000059/1-598 PYYPKSMKCY LSRTPHRMPS ERHRIGNLKK YYLLNAASLL PVLALELRDG ENSP00000318986/1-340 PNYPKSVKCY LSRTPGRIPS ERHQIGNLKK YYLLNAASLL PVLALELRDG ENSBTAP00000020876/1-338 PYYPKSMKCY LSRTPHRMPS ERHQTGNLKK YYLLNAASLL PVLALELRDG bmy_09636T0/1-267 PYYPKSMKCY LSRTPHRMPS ERHQIGNLKK YYLLNAASLL PVLALELRDG ENSTTRP00000006779/1-339 PYYPKSMKCY LSRTPHRMPS ERHQTGNLKK YYLLNAASLL PVLALELRDG 451 500 BACU000059/1-598 EKVLDLCAGP GGKSIALLQC AYPGYLHCNE HDGLRLRWLR QTLESFIPQP ENSP00000318986/1-340 EKVLDLCAAP GGKSIALLQC ACPGYLHCNE YDSLRLRWLR QTLESFIPQP ENSBTAP00000020876/1-338 EKVLDLCAAP GGKSLALLQC AYPGYLHCNE YDSLRLRWLR QTLESFIPQP bmy_09636T0/1-267 EKVLDLCAGP GGKSIALLQC AYPGYLHCNE YDSLRLRWLR QTLESFIPQP ENSTTRP00000006779/1-339 EKVLDLCAGP GGKSIALLQC AYPGYLHCNE YDSLRLRWLR QTLESFIPQP 501 550 BACU000059/1-598 LVNVIKVSEL DGREMGDAQP ETFDKVLVDA PCSNDRSWLF SSDSQNAACR ENSP00000318986/1-340 LINVIKVSEL DGRKMGDAQP EMFDKVLVDA PCSNDRSWLF SSDSQKASCR ENSBTAP00000020876/1-338 LVNVIKVSEL DGREMGDAQP ETFDKVLVDA PCSNDRSWLF SSDSQKAACR bmy_09636T0/1-267 LVNVIKVSEV DGREMGDAQP ETFDKVLVDA PCSNDRSWLF SSDSQNAACR ENSTTRP00000006779/1-339 LVNVIKVSEL DGREMGDSQP ETFDKVLVDA PCSNDRSWLF SSDSQNAACR 551 600 BACU000059/1-598 ISQRRNLPLL QIELLSKAKS DLK------- -----CKSDH VVLLFEVCSG ENSP00000318986/1-340 ISQRRNLPLL QIELLRSAIK ALRPGGILVY STCTLSKAEN QDVISEILNS ENSBTAP00000020876/1-338 ISQRRNLPLL QMELLRSAIK ALRPGGLLVY STCTLSKAEN QDVISEVLNS bmy_09636T0/1-267 ISQRRNLPLL QIELLR---- ---------- ---------- ---------- ENSTTRP00000006779/1-339 ISQRRNLPLL QIELLRSAIK ALRPGGLLVY STCTLSKAEN QDVISEVLNS 601 650 BACU000059/1-598 SPLLLRLQIP ---------- ---------- ---------- ---------- ENSP00000318986/1-340 HGNIMPMDIK GIARTCSHDF TFAPTGQECG LLVIPDKGKA WGPMYVAKLK ENSBTAP00000020876/1-338 YSNIMPVDIK EMARTCSRDF TFAPTGQECG LLVIPDKGKA WGPMYVAKLK bmy_09636T0/1-267 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006779/1-339 YSNIMPVDIK EMARTCSQDF TFAPTGQECG LLVIPDKGKA WGPMYVAKLK 651 700 BACU000059/1-598 -------- ENSP00000318986/1-340 KSWSTGKW ENSBTAP00000020876/1-338 KSWTT--- bmy_09636T0/1-267 -------- ENSTTRP00000006779/1-339 KSWTT-NW