KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:51 2014 Check: 00 .. Name: ENSTTRP00000001090/1-289 Len: 323 Check: 8068 Weight: 1.00 Name: bmy_15350T0/1-271 Len: 323 Check: 3807 Weight: 1.00 Name: BACU014887/1-323 Len: 323 Check: 309 Weight: 1.00 Name: ENSP00000217515/1-289 Len: 323 Check: 5076 Weight: 1.00 Name: ENSBTAP00000020880/1-289 Len: 323 Check: 4796 Weight: 1.00 // 1 50 ENSTTRP00000001090/1-289 MVGVKPVGSD PDFQPELSGA GSRLAVVKFT MRGXXXXXXX XXXXXXXXXX bmy_15350T0/1-271 MVGVKPVGSD PDFQPELSGA GSRLAVVKFT MRGIGK---- ---------- BACU014887/1-323 MVGVKPVGSD PDFQPELSGA GSRLAVVKFT MRGCGPCLRI APAFSSMSNK ENSP00000217515/1-289 MVGVKPVGSD PDFQPELSGA GSRLAVVKFT MRGCGPCLRI APAFSSMSNK ENSBTAP00000020880/1-289 MVGVKPVGSD PDFQPELSGA GSRLAVVKFT MRGCGPCLRI APAFSSMSNK 51 100 ENSTTRP00000001090/1-289 XXXXXXXXXX XXXXXGTAAT NNISATPTFL FFRNKVRIDQ YQGADAVGLE bmy_15350T0/1-271 -------GGG TLDFKGTAAT NNISATPTFL FFRNKVRIDQ YQGADAVGLE BACU014887/1-323 YPQAVFLEVD VHQCQGTAAT NNISATPTFL FFRNKVRIDQ YQGADAVGLE ENSP00000217515/1-289 YPQAVFLEVD VHQCQGTAAT NNISATPTFL FFRNKVRIDQ YQGADAVGLE ENSBTAP00000020880/1-289 YPQAVFLEVD VHQCQGTAAT NNISATPTFL FFRNKVRIDQ YQGADAVGLE 101 150 ENSTTRP00000001090/1-289 EKIKQHLEND PGSNEDTDIP KGYMDLMPFI NKAGCECLNE SDEHGFDNCL bmy_15350T0/1-271 EKIKQHLEND PGSNEDTDIP KGYMDLMPFI NKAGCECLNE SDEHGFDNCL BACU014887/1-323 EKIKQHLEND PGSNEDTDIP KGYMDLMPFI NKAGCECLNE SDEHGFDNCL ENSP00000217515/1-289 EKIKQHLEND PGSNEDTDIP KGYMDLMPFI NKAGCECLNE SDEHGFDNCL ENSBTAP00000020880/1-289 EKIKQHLEND PGSNEDTDIP KGYMDLMPFI NKAGCECLNE SDEHGFDNCL 151 200 ENSTTRP00000001090/1-289 RKDMTFLESD CDEQLLITVA FNQPVKLYSM KFQGPDNGQG PKYVKIFINL bmy_15350T0/1-271 RKDMTFLESD CDEQLLITVA FNQPVKLYSM KFQGPDNGQG PKYVKIFINL BACU014887/1-323 RKDMTFLESD CDEQLLITVA FNQPVKLYSM KFQGPDNGQG PKYVKIFINL ENSP00000217515/1-289 RKDTTFLESD CDEQLLITVA FNQPVKLYSM KFQGPDNGQG PKYVKIFINL ENSBTAP00000020880/1-289 RKDMTFLESD CDEQLLITVA FNQPVKLYSM KFQGPDNGQG PKYVKIFINL 201 250 ENSTTRP00000001090/1-289 PRSMDFEEAE RSEPTQALEL TEDDIKEDGI VPLRYVKFQN VNSVTIFVQS bmy_15350T0/1-271 PRSMDFEEAE RSEPTQALEL TEDDIKEDGI VPLRYVKFQN VNSVTIFVQS BACU014887/1-323 PRSMDFEEAE RSEPTQALEL TEDDIKEDGI VPLRYVKFQN VNSVTIFVQS ENSP00000217515/1-289 PRSMDFEEAE RSEPTQALEL TEDDIKEDGI VPLRYVKFQN VNSVTIFVQS ENSBTAP00000020880/1-289 PRSMDFEEAE RSEPTQALEL TEDDIKEDGI VPLRYVKFQN VNSVTIFVQS 251 300 ENSTTRP00000001090/1-289 NQGEEETTRI SYFTFIGTPV QATNMNDFKR ---------- ---------- bmy_15350T0/1-271 NQGEEETTRI SYFTFIGTPV QATNMNDFKR RI-------- ---------- BACU014887/1-323 NQGEEETTRI SYFTFIGTPV QATNMNDFKR RLSIFHSLPL PINHCFCSDG ENSP00000217515/1-289 NQGEEETTRI SYFTFIGTPV QATNMNDFKR ---------- ---------- ENSBTAP00000020880/1-289 NQGEEETTRI SYFTFIGTPV QATNMNDFKR ---------- ---------- 301 350 ENSTTRP00000001090/1-289 ---------- --VVGKKGES H-- bmy_15350T0/1-271 ---------- --HIGKLRVI NL- BACU014887/1-323 ITSVSLVILI HAVVNKSNYF CQA ENSP00000217515/1-289 ---------- --VVGKKGES H-- ENSBTAP00000020880/1-289 ---------- --VVGKKGES H--