KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:01 2014 Check: 00 .. Name: ENSP00000288532/1-327 Len: 351 Check: 8527 Weight: 1.00 Name: ENSTTRP00000000138/1-327 Len: 351 Check: 8298 Weight: 1.00 Name: ENSBTAP00000020929/1-330 Len: 351 Check: 135 Weight: 1.00 Name: bmy_05752T0/1-348 Len: 351 Check: 8821 Weight: 1.00 Name: BACU010541/1-348 Len: 351 Check: 8177 Weight: 1.00 // 1 50 ENSP00000288532/1-327 MAAPGSCALW SYCGRGWSRA MRGCQLLGLR SSWPGDLLSA RLLSQEKRAA ENSTTRP00000000138/1-327 MAAPRSWVLW SFCCRGSSRV LLGCRLPGLR SSWPRGPLGA RPLSQEKRAT ENSBTAP00000020929/1-330 MAAPRSWALW SFCGCGWSRA VSGCRLPGLR SSSPRGPLGA RLLSQEKEAT bmy_05752T0/1-348 MAAPRSWVLW SFCCRGWSRV LPGCRLPGLR SSWPRGPLGA RPLSQEKRAT BACU010541/1-348 MAAPRSWALW SFCCRGWSRV LPGCRLPGLR SSRPRGPLGA RPLSQEKRAT 51 100 ENSP00000288532/1-327 ETHFGFETVS EEEKGGK--- ---------- --------VY QVFESVAKKY ENSTTRP00000000138/1-327 ETHFGFETVS EEEKGGK--- ---------- --------VY QVFESVAKKY ENSBTAP00000020929/1-330 ETHFGFETVS EEEKGGK--- ---------- --------VY QVFESVAKKY bmy_05752T0/1-348 ETHFGFETVS EEEKGGKGEK GLFQVNLMNS PIMLYFSQVY QVFESVAKKY BACU010541/1-348 ETHFGFETVS EEEKGGKGEK GLFQVNLMNS PIMLYFSQVY QVFESVARKY 101 150 ENSP00000288532/1-327 DVMNDMMSLG IHRVWKDLLL WKMHPLPGTQ LLDVAGGTGD IAFRFLNYVQ ENSTTRP00000000138/1-327 DVMNDMMSLG IHRIWKDLLL WKMRPFPGTQ LLDVAGGTGD IAFRFLNYVQ ENSBTAP00000020929/1-330 DVMNDMMSLG IHRVWKDLLL WKMRPFPGTQ LLDVAGGTGD IAFRFLNYVQ bmy_05752T0/1-348 DVMNDMMSLG IHRVWKDLLL WKMRPFPGTQ LLDVAGGTGD IAFRFLNYVQ BACU010541/1-348 DVMNDMMSLG IHRVWKDLLL WKMRPFPGTQ LLDVAGGTGD IAFRFLNYVQ 151 200 ENSP00000288532/1-327 SQHQRKQKRQ LRAQQNLSWE EIAKEYQNEE DSLGGSRVVV CDINKEMLKV ENSTTRP00000000138/1-327 AQHQRKEKRQ LRAQQNLSWE EIAKKYQNEE DSLDGSHVMV CDINKEMLKI ENSBTAP00000020929/1-330 AQHQRKQKRQ LRAQQNLSWE EIARKYQNEE DSLGGSHVMV CDINKEMLKI bmy_05752T0/1-348 AQHQRKEKRQ LRAQQNLSWE EIAKKYQNEE DSLGGSHVMV CDINKEMLKI BACU010541/1-348 AQHQRKEKRQ LRAQQNLSWE EIAKKYQNEE DSLGGSHVMV CDINKEMLKI 201 250 ENSP00000288532/1-327 GKQKALAQGY RAGLAWVLGD AEELPFDDDK FDIYTIAFGI RNVTHIDQAL ENSTTRP00000000138/1-327 GKQKARARGY KAGLAWVVGD AEELPFDDDK FDVXXXXXXX XXXXXXXXAL ENSBTAP00000020929/1-330 GKQKARAQGY KAGLAWILGD AEELPFDDNK FDVYTIAFGI RNVTHIDQAL bmy_05752T0/1-348 GKQKARAQGY KAGLAWVLGD AEELPFDDDK FDVYTIAFGI RNVTHIDRAL BACU010541/1-348 GKQKARAQGY KAGLAWILGD AEELPFDDDK FDVYTIAFGI RNVTHIDRAL 251 300 ENSP00000288532/1-327 QEAHRVLKPG GRFLCLEFSQ VNNPLISRLY DLYSFQVIPV LGEVIAGDWK ENSTTRP00000000138/1-327 QEAHRVLKPG GRFLCLEFSQ VNNPLVSRLY DVYSFQVIPV LGEVIAGDWK ENSBTAP00000020929/1-330 QEAHRVLKPG GRFLCLEFSQ VNNPLLSRLY DVYSFQVIPV LGEVIAGDWK bmy_05752T0/1-348 QEAHRVLKPG GRFLCLEFSQ VNNPLVSRLY DVYSFQVIPV LGEVIAGDWK BACU010541/1-348 QEAHRVLKPG GRFLCLEFSQ VNNPLVSRLY DVYSFQVIPV LGEVIAGDWK 301 350 ENSP00000288532/1-327 SYQYLVESIR RFPSQEEFKD MIEDAGFHKV TYESLTSGIV AIHSGFKL-- ENSTTRP00000000138/1-327 SYQYLVESIR QFPSQEEFKE MIEDAGFQKV TYENLTSGIV AIHSGFKL-- ENSBTAP00000020929/1-330 SYQYLVESIR QFPSQEEFKE MIEDAGFQKV TYENLTSGIV AIHSGFKLYL bmy_05752T0/1-348 SYQYLVESIR QFPSQEEFKE MIEDAGFQKV TYENLTSGIV AIHSGFKL-- BACU010541/1-348 SYQYLVESIR QFPSQEEFKE MIEDAGFQKV TYENLTSGIV AIHSGFKL-- 351 400 ENSP00000288532/1-327 - ENSTTRP00000000138/1-327 - ENSBTAP00000020929/1-330 R bmy_05752T0/1-348 - BACU010541/1-348 -